RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W SPO73P40031 143 aa4.73□□□□□ -1.65
UBP9YER098W ATM1P40416 690 aa4.73□□□□□ -1.65
UBP9YER098W NBP35P52920 328 aa4.73□□□□□ -1.65
UBP9YER098W RMD9P53140 646 aaKnown RBP4.73□□□□□ -1.65
UBP9YER098W HCH1P53834 153 aa4.73□□□□□ -1.65
UBP9YER098W RLI1Q03195 608 aaKnown RBP4.73□□□□□ -1.65
UBP9YER098W YDR124WQ04608 324 aa4.73□□□□□ -1.65
UBP9YER098W TPO3Q06451 622 aa4.73□□□□□ -1.65
UBP9YER098W NRT1Q08485 598 aa4.73□□□□□ -1.65
UBP9YER098W PUS9Q12069 462 aa4.73□□□□□ -1.65
UBP9YER098W GSC2P40989 1895 aa4.73□□□□□ -1.65
UBP9YER098W ARG80P07249 177 aa4.72□□□□□ -1.65
UBP9YER098W DST1P07273 309 aa4.72□□□□□ -1.65
UBP9YER098W MRPL44P19956 98 aa4.72□□□□□ -1.65
UBP9YER098W MPM1P40364 252 aa4.72□□□□□ -1.65
UBP9YER098W UTP25P40498 721 aaKnown RBP4.72□□□□□ -1.65
UBP9YER098W YIL024CP40543 189 aa4.72□□□□□ -1.65
UBP9YER098W PSA1P41940 361 aaKnown RBP4.72□□□□□ -1.65
UBP9YER098W PAM16P42949 149 aa4.72□□□□□ -1.65
UBP9YER098W SNG1P46950 547 aa4.72□□□□□ -1.65
UBP9YER098W YAE1P47118 141 aaPredicted RBP4.72□□□□□ -1.65
UBP9YER098W GIS1Q03833 894 aa4.72□□□□□ -1.65
UBP9YER098W YLR413WQ06689 675 aa4.72□□□□□ -1.65
UBP9YER098W PLB3Q08108 686 aa4.72□□□□□ -1.65
UBP9YER098W RAD28Q12021 506 aa4.72□□□□□ -1.65
UBP9YER098W SPC3Q12133 184 aa4.72□□□□□ -1.65
UBP9YER098W GIS3Q12418 502 aa4.72□□□□□ -1.65
UBP9YER098W YPR145C-AQ2V2P0 78 aa4.72□□□□□ -1.65
UBP9YER098W VMA9Q3E7B6 73 aa4.72□□□□□ -1.65
UBP9YER098W YPR014CQ6B0W2 109 aa4.72□□□□□ -1.65
UBP9YER098W RAS2P01120 322 aaKnown RBP4.72□□□□□ -1.65
UBP9YER098W EMP70P32802 667 aa4.72□□□□□ -1.65
UBP9YER098W TCM62P38228 572 aaKnown RBP4.72□□□□□ -1.65
UBP9YER098W AIM18P38884 321 aa4.72□□□□□ -1.65
UBP9YER098W RFC4P40339 323 aaKnown RBP4.72□□□□□ -1.65
UBP9YER098W GDS1P41913 522 aa4.72□□□□□ -1.65
UBP9YER098W MRX5P47007 382 aa4.72□□□□□ -1.65
UBP9YER098W ROG1P53118 685 aa4.72□□□□□ -1.65
UBP9YER098W YVH1Q02256 364 aaKnown RBP4.72□□□□□ -1.65
UBP9YER098W MSS11Q03825 758 aa4.72□□□□□ -1.65
UBP9YER098W VBA1Q04301 562 aa4.72□□□□□ -1.65
UBP9YER098W MRPL1Q04599 285 aa4.72□□□□□ -1.65
UBP9YER098W SWF1Q04629 336 aa4.72□□□□□ -1.65
UBP9YER098W SUT2Q12286 268 aa4.72□□□□□ -1.65
UBP9YER098W RDI1Q12434 202 aa4.72□□□□□ -1.65
UBP9YER098W ADE4P04046 510 aaKnown RBP4.71□□□□□ -1.65
UBP9YER098W RPB3P16370 318 aaKnown RBP4.71□□□□□ -1.65
UBP9YER098W ATP10P18496 279 aa4.71□□□□□ -1.65
UBP9YER098W MSS51P32335 436 aa4.71□□□□□ -1.65
UBP9YER098W DOA4P32571 926 aa4.71□□□□□ -1.65
UBP9YER098W COT1P32798 439 aa4.71□□□□□ -1.65
UBP9YER098W EMP24P32803 203 aaKnown RBP4.71□□□□□ -1.65
UBP9YER098W ATG8P38182 117 aaRIP-Chip data4.71□□□□□ -1.65not detected
UBP9YER098W YHR122WP38829 231 aa4.71□□□□□ -1.65
UBP9YER098W YHR210CP38893 341 aa4.71□□□□□ -1.65
UBP9YER098W PRE6P40303 254 aaKnown RBP4.71□□□□□ -1.65
UBP9YER098W RPA34P47006 233 aaPredicted RBP4.71□□□□□ -1.65
UBP9YER098W HMS2P47175 358 aa4.71□□□□□ -1.65
UBP9YER098W RTT102P53330 157 aa4.71□□□□□ -1.65
UBP9YER098W IBD2P53892 351 aa4.71□□□□□ -1.65
UBP9YER098W RRN5Q02983 363 aa4.71□□□□□ -1.65
UBP9YER098W CAC2Q04199 468 aa4.71□□□□□ -1.65
UBP9YER098W GAS2Q06135 555 aa4.71□□□□□ -1.65
UBP9YER098W ATX2Q12067 313 aa4.71□□□□□ -1.65
UBP9YER098W AGC1Q12482 902 aa4.71□□□□□ -1.65
UBP9YER098W SFG1Q12507 346 aa4.71□□□□□ -1.65
UBP9YER098W COX3P00420 269 aa4.71□□□□□ -1.66
UBP9YER098W HEM2P05373 342 aa4.71□□□□□ -1.66
UBP9YER098W ILV5P06168 395 aaKnown RBP4.71□□□□□ -1.66
UBP9YER098W NAM2P11325 894 aa4.71□□□□□ -1.66
UBP9YER098W MAK32P23060 363 aa4.71□□□□□ -1.66
UBP9YER098W MSN4P33749 630 aa4.71□□□□□ -1.66
UBP9YER098W SKT5P34226 696 aa4.71□□□□□ -1.66
UBP9YER098W YKL162CP36052 402 aa4.71□□□□□ -1.66
UBP9YER098W BNA4P38169 460 aa4.71□□□□□ -1.66
UBP9YER098W YMR262WP38430 313 aa4.71□□□□□ -1.66
UBP9YER098W RRG9P40156 214 aa4.71□□□□□ -1.66
UBP9YER098W FMC1P40491 155 aa4.71□□□□□ -1.66
UBP9YER098W YGR201CP42936 225 aa4.71□□□□□ -1.66
UBP9YER098W COX16P47081 118 aa4.71□□□□□ -1.66
UBP9YER098W YJR111CP47148 283 aaKnown RBP4.71□□□□□ -1.66
UBP9YER098W PAC10P48363 199 aa4.71□□□□□ -1.66
UBP9YER098W PKP2P53170 491 aa4.71□□□□□ -1.66
UBP9YER098W GND2P53319 492 aa4.71□□□□□ -1.66
UBP9YER098W PRM1P53835 661 aa4.71□□□□□ -1.66
UBP9YER098W MFG1Q07684 458 aa4.71□□□□□ -1.66
UBP9YER098W LEU4P06208 619 aaKnown RBP4.7□□□□□ -1.66
UBP9YER098W CAR2P07991 424 aaKnown RBP4.7□□□□□ -1.66
UBP9YER098W SSA3P09435 649 aaKnown RBP4.7□□□□□ -1.66
UBP9YER098W AQY1P0CD91 305 aa4.7□□□□□ -1.66
UBP9YER098W IDH1P28834 360 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
UBP9YER098W UBA4P38820 440 aa4.7□□□□□ -1.66
UBP9YER098W ISC1P40015 477 aaKnown RBP4.7□□□□□ -1.66
UBP9YER098W SHS1Q07657 551 aa4.7□□□□□ -1.66
UBP9YER098W IES4Q08561 116 aa4.7□□□□□ -1.66
UBP9YER098W EFG1Q3E705 233 aaKnown RBP4.7□□□□□ -1.66
UBP9YER098W RPL4AP10664 362 aaKnown RBP4.7□□□□□ -1.66
UBP9YER098W YMC1P32331 307 aa4.7□□□□□ -1.66
UBP9YER098W YBR013CP38215 129 aa4.7□□□□□ -1.66
UBP9YER098W RCK1P38622 512 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms