RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C YJR141WP47172 347 aaPredicted RBP1.42□□□□□ -2.18
SMB1YER029C MND1P53102 219 aa1.42□□□□□ -2.18
SMB1YER029C FMP41P53889 259 aaKnown RBP1.42□□□□□ -2.18
SMB1YER029C YNL050CP53952 270 aa1.42□□□□□ -2.18
SMB1YER029C SPO19Q03029 223 aa1.42□□□□□ -2.18
SMB1YER029C SDC1Q03323 175 aa1.42□□□□□ -2.18
SMB1YER029C YMR166CQ03829 368 aa1.42□□□□□ -2.18
SMB1YER029C YOR283WQ12040 230 aaKnown RBP1.42□□□□□ -2.18
SMB1YER029C COS2P0CX12 379 aa1.41□□□□□ -2.18
SMB1YER029C COS3P0CX13 379 aa1.41□□□□□ -2.18
SMB1YER029C DBP3P20447 523 aaKnown RBP1.41□□□□□ -2.18
SMB1YER029C RPS0AP32905 252 aaKnown RBP1.41□□□□□ -2.18
SMB1YER029C VPS45P38932 577 aa1.41□□□□□ -2.18
SMB1YER029C KEL2P50090 882 aa1.41□□□□□ -2.18
SMB1YER029C NBP1P52919 319 aaPredicted RBP1.41□□□□□ -2.18
SMB1YER029C YNL260CP53846 198 aa1.41□□□□□ -2.18
SMB1YER029C ARP5P53946 755 aa1.41□□□□□ -2.18
SMB1YER029C VPS60Q03390 229 aa1.41□□□□□ -2.18
SMB1YER029C BER1Q06688 274 aaKnown RBP1.41□□□□□ -2.18
SMB1YER029C YLR413WQ06689 675 aa1.41□□□□□ -2.18
SMB1YER029C RDS3Q06835 107 aaPredicted RBP1.41□□□□□ -2.18
SMB1YER029C NUP157P40064 1391 aaKnown RBP1.4□□□□□ -2.19
SMB1YER029C ILV1P00927 576 aaKnown RBP1.4□□□□□ -2.19
SMB1YER029C SCO1P23833 295 aa1.4□□□□□ -2.19
SMB1YER029C KRE6P32486 720 aa1.4□□□□□ -2.19
SMB1YER029C CAT2P32796 670 aaKnown RBP1.4□□□□□ -2.19
SMB1YER029C PHO89P38361 574 aa1.4□□□□□ -2.19
SMB1YER029C HIS2P38635 335 aa1.4□□□□□ -2.19
SMB1YER029C ARN2P38724 620 aa1.4□□□□□ -2.19
SMB1YER029C TDA11P38854 504 aa1.4□□□□□ -2.19
SMB1YER029C FCY21P40039 528 aa1.4□□□□□ -2.19
SMB1YER029C COG3P40094 801 aa1.4□□□□□ -2.19
SMB1YER029C RPE1P46969 238 aa1.4□□□□□ -2.19
SMB1YER029C DAN1P47178 298 aa1.4□□□□□ -2.19
SMB1YER029C YMR209CQ03648 457 aa1.4□□□□□ -2.19
SMB1YER029C ERV41Q04651 352 aa1.4□□□□□ -2.19
SMB1YER029C ISD11Q6Q560 94 aa1.4□□□□□ -2.19
SMB1YER029C TDH1P00360 332 aaKnown RBP1.39□□□□□ -2.19
SMB1YER029C FRS2P15625 503 aaKnown RBP1.39□□□□□ -2.19
SMB1YER029C MEK1P24719 497 aaPredicted RBP1.39□□□□□ -2.19
SMB1YER029C RRT12P25381 491 aa1.39□□□□□ -2.19
SMB1YER029C DAL80P26343 269 aa1.39□□□□□ -2.19
SMB1YER029C ICL1P28240 557 aaPredicted RBP1.39□□□□□ -2.19
SMB1YER029C HMT1P38074 348 aa1.39□□□□□ -2.19
SMB1YER029C YHI9P38765 294 aa1.39□□□□□ -2.19
SMB1YER029C RRF1P38771 230 aa1.39□□□□□ -2.19
SMB1YER029C DSK2P48510 373 aa1.39□□□□□ -2.19
SMB1YER029C MYO5Q04439 1219 aaKnown RBP1.39□□□□□ -2.19
SMB1YER029C TAF9Q05027 157 aa1.39□□□□□ -2.19
SMB1YER029C YOL019WQ08157 551 aa1.39□□□□□ -2.19
SMB1YER029C RPS3P05750 240 aaKnown RBP1.38□□□□□ -2.19
SMB1YER029C RAD10P06838 210 aa1.38□□□□□ -2.19
SMB1YER029C GDH2P33327 1092 aaKnown RBP1.38□□□□□ -2.19
SMB1YER029C YKL070WP36087 169 aa1.38□□□□□ -2.19
SMB1YER029C PEX31P53203 462 aa1.38□□□□□ -2.19
SMB1YER029C COS6P53344 381 aa1.38□□□□□ -2.19
SMB1YER029C ERV25P54837 211 aaKnown RBP1.38□□□□□ -2.19
SMB1YER029C CDC14Q00684 551 aa1.38□□□□□ -2.19
SMB1YER029C GRH1Q04410 372 aaKnown RBP1.38□□□□□ -2.19
SMB1YER029C DCR2Q05924 578 aa1.38□□□□□ -2.19
SMB1YER029C BCP1Q06338 283 aa1.38□□□□□ -2.19
SMB1YER029C GPN3Q06543 272 aa1.38□□□□□ -2.19
SMB1YER029C FMP16Q12497 93 aa1.38□□□□□ -2.19
SMB1YER029C YPL247CQ12523 523 aa1.38□□□□□ -2.19
SMB1YER029C RPC40P07703 335 aaKnown RBP1.37□□□□□ -2.19
SMB1YER029C YSR3P23501 404 aa1.37□□□□□ -2.19
SMB1YER029C PPH21P23594 369 aa1.37□□□□□ -2.19
SMB1YER029C BMH1P29311 267 aaKnown RBP1.37□□□□□ -2.19
SMB1YER029C CSG2P35206 410 aa1.37□□□□□ -2.19
SMB1YER029C NRG2P38082 220 aa1.37□□□□□ -2.19
SMB1YER029C YHR045WP38775 560 aa1.37□□□□□ -2.19
SMB1YER029C SER33P40510 469 aa1.37□□□□□ -2.19
SMB1YER029C FMP33P46998 180 aa1.37□□□□□ -2.19
SMB1YER029C YJL027CP47063 138 aaPredicted RBP1.37□□□□□ -2.19
SMB1YER029C YJL016WP47072 561 aa1.37□□□□□ -2.19
SMB1YER029C COG7P53195 279 aa1.37□□□□□ -2.19
SMB1YER029C CPD1P53314 239 aa1.37□□□□□ -2.19
SMB1YER029C SLM2P53955 656 aa1.37□□□□□ -2.19
SMB1YER029C EGD1Q02642 157 aaKnown RBP1.37□□□□□ -2.19
SMB1YER029C VBA1Q04301 562 aa1.37□□□□□ -2.19
SMB1YER029C SUE1Q06524 206 aa1.37□□□□□ -2.19
SMB1YER029C YIL002W-AQ3E7Z5 69 aa1.37□□□□□ -2.19
SMB1YER029C YMR316C-AI2HB70 103 aa1.36□□□□□ -2.19
SMB1YER029C RPP0P05317 312 aaKnown RBP1.36□□□□□ -2.19
SMB1YER029C POX1P13711 748 aa1.36□□□□□ -2.19
SMB1YER029C PEX3P28795 441 aa1.36□□□□□ -2.19
SMB1YER029C GRE3P38715 327 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
SMB1YER029C PEX18P38855 283 aa1.36□□□□□ -2.19
SMB1YER029C MRPL49P40858 161 aaPredicted RBP1.36□□□□□ -2.19
SMB1YER029C BAT2P47176 376 aaKnown RBP1.36□□□□□ -2.19
SMB1YER029C SPP2Q02521 185 aa1.36□□□□□ -2.19
SMB1YER029C TRM44Q02648 567 aaKnown RBP1.36□□□□□ -2.19
SMB1YER029C YMR114CQ04471 368 aaKnown RBP1.36□□□□□ -2.19
SMB1YER029C SPO77Q06134 477 aa1.36□□□□□ -2.19
SMB1YER029C TY3A-GQ12173 290 aa1.36□□□□□ -2.19
SMB1YER029C TY3A-IQ99219 290 aa1.36□□□□□ -2.19
SMB1YER029C YEL009C-AA0A023PZF2 135 aa1.35□□□□□ -2.19
SMB1YER029C YAL064W-BO13512 126 aa1.35□□□□□ -2.19
SMB1YER029C POF1P25576 258 aa1.35□□□□□ -2.19
SMB1YER029C GON7P46984 123 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms