RNA–Protein interactions for RNA: YDR314C

RAD34, Transcript of Protein involved in nucleotide excision repair (NER), yeast

Gene RAD34, Length 2,079 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD34	YDR314C	CDC40	P40968	455 aa	Predicted RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	BAT2	P47176	376 aa	Known RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	DAN1	P47178	298 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	GTO1	P48239	356 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	SLM2	P53955	656 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	VPS60	Q03390	229 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	CGI121	Q03705	181 aa	Known RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	FCF1	Q05498	189 aa	Predicted RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	CTS2	Q06350	511 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	GPN3	Q06543	272 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	BEM2	P39960	2167 aa	Known RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	TDH1	P00360	332 aa	Known RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	ATP6	P00854	259 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	RAD10	P06838	210 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	PET494	P07390	489 aa	Predicted RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	TPM1	P17536	199 aa	Known RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	SCO1	P23833	295 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	CSG2	P35206	410 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	NRG2	P38082	220 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	HIS2	P38635	335 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	ARN2	P38724	620 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	YHR045W	P38775	560 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	SPT8	P38915	602 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	MNN9	P39107	395 aa	Known RBP	0.8	□□□□□ -2.28
RAD34	YDR314C	AGP3	P43548	558 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	TAF9	Q05027	157 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	CUR1	Q06469	252 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	YHR086W-A	Q3E746	53 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	YBL112C	Q3E7Y4	105 aa		0.8	□□□□□ -2.28
RAD34	YDR314C	DPM1	P14020	267 aa	Known RBP	0.79	□□□□□ -2.28
RAD34	YDR314C	YHI9	P38765	294 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	FMP41	P53889	259 aa	Known RBP	0.79	□□□□□ -2.28
RAD34	YDR314C	PRO2	P54885	456 aa	Known RBP	0.79	□□□□□ -2.28
RAD34	YDR314C	ECM18	Q04623	453 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	BER1	Q06688	274 aa	Known RBP	0.79	□□□□□ -2.28
RAD34	YDR314C	TOM40	P23644	387 aa	Known RBP	0.79	□□□□□ -2.28
RAD34	YDR314C	SFC1	P33303	322 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	NIF3	P53081	288 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	PEX31	P53203	462 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	CPD1	P53314	239 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	YOR268C	Q08734	132 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	REX3	Q12090	404 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	MDY2	Q12285	212 aa		0.79	□□□□□ -2.28
RAD34	YDR314C	DPB2	P24482	689 aa	Predicted RBP	0.78	□□□□□ -2.28
RAD34	YDR314C	GON7	P46984	123 aa		0.78	□□□□□ -2.28
RAD34	YDR314C	MND1	P53102	219 aa		0.78	□□□□□ -2.28
RAD34	YDR314C	YMR114C	Q04471	368 aa	Known RBP	0.78	□□□□□ -2.28
RAD34	YDR314C	YAL064W-B	O13512	126 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	RPS3	P05750	240 aa	Known RBP	0.77	□□□□□ -2.29
RAD34	YDR314C	HMT1	P38074	348 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	YJL016W	P47072	561 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	IBA57	P47158	497 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	COS6	P53344	381 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	SDC1	Q03323	175 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	UGA1	P17649	471 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	PEX3	P28795	441 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	RNP1	P32385	249 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	MAL32	P38158	584 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.77	□□□□□ -2.29	not detected
RAD34	YDR314C	YHL026C	P38740	315 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	COG3	P40094	801 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	MRPL49	P40858	161 aa	Predicted RBP	0.77	□□□□□ -2.29
RAD34	YDR314C	TAD2	P47058	250 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	PNC1	P53184	216 aa	Known RBP	0.77	□□□□□ -2.29
RAD34	YDR314C	MAL12	P53341	584 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	YNL050C	P53952	270 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	SFH1	Q06168	426 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	SEC10	Q06245	871 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	PER33	Q12144	273 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	SMT3	Q12306	101 aa	Known RBP	0.77	□□□□□ -2.29
RAD34	YDR314C	EMC6	Q12431	108 aa		0.77	□□□□□ -2.29
RAD34	YDR314C	TEM1	P38987	245 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	NPT1	P39683	429 aa	Known RBP	0.76	□□□□□ -2.29
RAD34	YDR314C	YFR054C	P43622	192 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	YJL027C	P47063	138 aa	Predicted RBP	0.76	□□□□□ -2.29
RAD34	YDR314C	CAB4	P53332	305 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	YNL260C	P53846	198 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	SPO19	Q03029	223 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	LOA1	Q06508	300 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	SLD7	Q08457	257 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	PST1	Q12355	444 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	NOT5	Q12514	560 aa	Predicted RBP	0.76	□□□□□ -2.29
RAD34	YDR314C	YPL247C	Q12523	523 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	RAD3	P06839	778 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	RPL4A	P10664	362 aa	Known RBP	0.76	□□□□□ -2.29
RAD34	YDR314C	YSR3	P23501	404 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	KRR1	P25586	316 aa	Predicted RBP	0.76	□□□□□ -2.29
RAD34	YDR314C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.76	□□□□□ -2.29	not detected
RAD34	YDR314C	VPS45	P38932	577 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	YJL118W	P47022	219 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	YJL028W	P47062	111 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	RPL4B	P49626	362 aa	Known RBP	0.76	□□□□□ -2.29
RAD34	YDR314C	TIM21	P53220	239 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	SLX9	P53251	210 aa	Predicted RBP	0.76	□□□□□ -2.29
RAD34	YDR314C	VBA1	Q04301	562 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	BOP2	Q06150	570 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	YOS9	Q99220	542 aa		0.76	□□□□□ -2.29
RAD34	YDR314C	ADH3	P07246	375 aa	Known RBP	0.75	□□□□□ -2.29
RAD34	YDR314C	RPC40	P07703	335 aa	Known RBP	0.75	□□□□□ -2.29
RAD34	YDR314C	YCR102C	P25608	368 aa		0.75	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms