RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS116	YDR194C	SFM1	Q12314	213 aa		4.95	□□□□□ -1.62
MSS116	YDR194C	RPS8A	P0CX39	200 aa	Known RBP	4.95	□□□□□ -1.62
MSS116	YDR194C	RPS8B	P0CX40	200 aa	Known RBP	4.95	□□□□□ -1.62
MSS116	YDR194C	YIL067C	P40514	678 aa		4.95	□□□□□ -1.62
MSS116	YDR194C	EGT2	P42835	1041 aa		4.95	□□□□□ -1.62
MSS116	YDR194C	BNS1	P50084	137 aa		4.95	□□□□□ -1.62
MSS116	YDR194C	CLD1	P53264	445 aa		4.95	□□□□□ -1.62
MSS116	YDR194C	CWC25	P53854	179 aa	Known RBP	4.95	□□□□□ -1.62
MSS116	YDR194C	JLP1	Q12358	412 aa		4.95	□□□□□ -1.62
MSS116	YDR194C	HMS1	Q12398	434 aa		4.95	□□□□□ -1.62
MSS116	YDR194C	RPB5	P20434	215 aa		4.94	□□□□□ -1.62
MSS116	YDR194C	URA10	P30402	227 aa		4.94	□□□□□ -1.62
MSS116	YDR194C	TPS2	P31688	896 aa	Known RBP	4.94	□□□□□ -1.62
MSS116	YDR194C	ALK2	P32789	676 aa	Predicted RBP	4.94	□□□□□ -1.62
MSS116	YDR194C	UTP18	P40362	594 aa	Predicted RBP	4.94	□□□□□ -1.62
MSS116	YDR194C	YJL213W	P40896	331 aa		4.94	□□□□□ -1.62
MSS116	YDR194C	VPS60	Q03390	229 aa		4.94	□□□□□ -1.62
MSS116	YDR194C	YPR098C	Q06089	161 aa		4.94	□□□□□ -1.62
MSS116	YDR194C	RPN8	Q08723	338 aa	Known RBP	4.94	□□□□□ -1.62
MSS116	YDR194C	AST1	P35183	429 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	SCW4	P53334	386 aa	Known RBP	4.93	□□□□□ -1.62
MSS116	YDR194C	YNR066C	P53752	436 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	TPS1	Q00764	495 aa	Known RBP	4.93	□□□□□ -1.62
MSS116	YDR194C	ATG17	Q06410	417 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	COQ10	Q08058	207 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	RRS1	Q08746	203 aa	Known RBP	4.93	□□□□□ -1.62
MSS116	YDR194C	TUS1	Q06412	1307 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	RPL28	P02406	149 aa	Known RBP	4.93	□□□□□ -1.62
MSS116	YDR194C	STE7	P06784	515 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	PHO2	P07269	559 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	GIT1	P25346	518 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	LDS1	P31379	325 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	GOS1	P38736	223 aa		4.93	□□□□□ -1.62
MSS116	YDR194C	YPL245W	Q12179	454 aa	Known RBP	4.93	□□□□□ -1.62
MSS116	YDR194C	MBA1	P38300	278 aa		4.92	□□□□□ -1.62
MSS116	YDR194C	FRT2	P39734	528 aa		4.92	□□□□□ -1.62
MSS116	YDR194C	YFR057W	P43625	151 aa		4.92	□□□□□ -1.62
MSS116	YDR194C	NRM1	P53718	249 aa		4.92	□□□□□ -1.62
MSS116	YDR194C	SNF6	P18888	332 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	ATG15	P25641	520 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	CSE2	P33308	149 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	VPS51	P36116	164 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	MDM31	P38880	579 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	YNL208W	P40159	199 aa	Known RBP	4.91	□□□□□ -1.62
MSS116	YDR194C	PAN6	P40459	309 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	BMT5	P40493	336 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	ATG18	P43601	500 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	TRM9	P49957	279 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	PEX10	Q05568	337 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	YCL021W-A	Q96VH3	125 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	HHF1	P02309	103 aa	Known RBP	4.91	□□□□□ -1.62
MSS116	YDR194C	MED8	P38304	223 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	NUP57	P48837	541 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	CRH1	P53301	507 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	PRP38	Q00723	242 aa	Predicted RBP	4.91	□□□□□ -1.62
MSS116	YDR194C	MRS2	Q01926	470 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	SRL1	Q08673	210 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	YOR292C	Q08743	309 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	MMT2	Q08970	484 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	RFM1	Q12192	310 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	YER078W-A	Q3E7A2	54 aa		4.91	□□□□□ -1.62
MSS116	YDR194C	SIR4	P11978	1358 aa		4.9	□□□□□ -1.62
MSS116	YDR194C	BCY1	P07278	416 aa	Known RBP	4.9	□□□□□ -1.63
MSS116	YDR194C	SDH3	P33421	198 aa		4.9	□□□□□ -1.63
MSS116	YDR194C	MRP21	P38175	177 aa		4.9	□□□□□ -1.63
MSS116	YDR194C	FZO1	P38297	855 aa		4.9	□□□□□ -1.63
MSS116	YDR194C	TRM5	P38793	499 aa		4.9	□□□□□ -1.63
MSS116	YDR194C	YJR054W	P47114	497 aa		4.9	□□□□□ -1.63
MSS116	YDR194C	YNL247W	P53852	767 aa	Known RBP	4.9	□□□□□ -1.63
MSS116	YDR194C	RHO3	Q00245	231 aa	Known RBP	4.9	□□□□□ -1.63
MSS116	YDR194C	ADD37	Q03233	198 aa		4.9	□□□□□ -1.63
MSS116	YDR194C	YLR126C	Q12288	251 aa		4.9	□□□□□ -1.63
MSS116	YDR194C	NAG1	Q8TGN9	163 aa		4.9	□□□□□ -1.63
MSS116	YDR194C	SPT3	P06844	337 aa		4.89	□□□□□ -1.63
MSS116	YDR194C	FBA1	P14540	359 aa	Known RBP	4.89	□□□□□ -1.63
MSS116	YDR194C	CDC13	P32797	924 aa	Known RBP	4.89	□□□□□ -1.63
MSS116	YDR194C	SDS23	P53172	527 aa		4.89	□□□□□ -1.63
MSS116	YDR194C	SDC1	Q03323	175 aa		4.89	□□□□□ -1.63
MSS116	YDR194C	YET2	Q04210	160 aa		4.89	□□□□□ -1.63
MSS116	YDR194C	UTP15	Q04305	513 aa	Known RBP	4.89	□□□□□ -1.63
MSS116	YDR194C	WSC4	P38739	605 aa		4.89	□□□□□ -1.63
MSS116	YDR194C	KRE29	P40026	464 aa		4.89	□□□□□ -1.63
MSS116	YDR194C	YGL159W	P53110	370 aa		4.89	□□□□□ -1.63
MSS116	YDR194C	NSA1	P53136	463 aa	Predicted RBP	4.89	□□□□□ -1.63
MSS116	YDR194C	YLR152C	P54072	576 aa		4.89	□□□□□ -1.63
MSS116	YDR194C	RPL4A	P10664	362 aa	Known RBP	4.88	□□□□□ -1.63
MSS116	YDR194C	YAK1	P14680	807 aa		4.88	□□□□□ -1.63
MSS116	YDR194C	RPL4B	P49626	362 aa	Known RBP	4.88	□□□□□ -1.63
MSS116	YDR194C	YIP3	P53633	176 aa		4.88	□□□□□ -1.63
MSS116	YDR194C	TLG2	Q08144	397 aa		4.88	□□□□□ -1.63
MSS116	YDR194C	PHO80	P20052	293 aa		4.87	□□□□□ -1.63
MSS116	YDR194C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
MSS116	YDR194C	YHR127W	P38833	243 aa	Known RBP	4.87	□□□□□ -1.63
MSS116	YDR194C	POG1	P40473	351 aa		4.87	□□□□□ -1.63
MSS116	YDR194C	YJR149W	P47177	404 aa		4.87	□□□□□ -1.63
MSS116	YDR194C	YGR015C	P53208	328 aa		4.87	□□□□□ -1.63
MSS116	YDR194C	SNZ2	P53824	298 aa		4.87	□□□□□ -1.63
MSS116	YDR194C	HEM25	Q07534	307 aa		4.87	□□□□□ -1.63
MSS116	YDR194C	YOR376W	Q08900	122 aa		4.87	□□□□□ -1.63
MSS116	YDR194C	JID1	Q12350	301 aa		4.87	□□□□□ -1.63

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