RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeast

Gene UPS3, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS3	YDR185C	GMC1	Q04399	608 aa		4.57	□□□□□ -1.68
UPS3	YDR185C	DPP1	Q05521	289 aa		4.57	□□□□□ -1.68
UPS3	YDR185C	YLR446W	Q06204	433 aa		4.57	□□□□□ -1.68
UPS3	YDR185C	HNT3	Q08702	217 aa		4.57	□□□□□ -1.68
UPS3	YDR185C	RSA1	Q08932	381 aa		4.57	□□□□□ -1.68
UPS3	YDR185C	ATP16	Q12165	160 aa		4.57	□□□□□ -1.68
UPS3	YDR185C	SME1	Q12330	94 aa	Predicted RBP	4.57	□□□□□ -1.68
UPS3	YDR185C	LAG2	Q92325	660 aa		4.57	□□□□□ -1.68
UPS3	YDR185C	AI5_BETA	Q9ZZX0	354 aa		4.57	□□□□□ -1.68
UPS3	YDR185C	STH1	P32597	1359 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	HHF1	P02309	103 aa	Known RBP	4.56	□□□□□ -1.68
UPS3	YDR185C	YBR121C-A	P0C5L4	52 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	MATALPHA2	P0CY08	210 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	HMLALPHA2	P0CY09	210 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	YMR31	P19955	123 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	MRPL20	P22354	195 aa	Predicted RBP	4.56	□□□□□ -1.68
UPS3	YDR185C	IFM1	P25038	676 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	URA10	P30402	227 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	SDH3	P33421	198 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	YNL208W	P40159	199 aa	Known RBP	4.56	□□□□□ -1.68
UPS3	YDR185C	JHD2	P47156	728 aa	Predicted RBP	4.56	□□□□□ -1.68
UPS3	YDR185C	USE1	P53146	245 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	MAL13	P53338	473 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	ASI3	P53983	676 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	RNY1	Q02933	434 aa	Known RBP	4.56	□□□□□ -1.68
UPS3	YDR185C	EBS1	Q03466	884 aa	Known RBP	4.56	□□□□□ -1.68
UPS3	YDR185C	PEX30	Q06169	523 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	SMD2	Q06217	110 aa	Known RBP	4.56	□□□□□ -1.68
UPS3	YDR185C	MFG1	Q07684	458 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	YKL183C-A	Q3E765	70 aa		4.56	□□□□□ -1.68
UPS3	YDR185C	PDR5	P33302	1511 aa	Known RBP	4.56	□□□□□ -1.68
UPS3	YDR185C	RPP0	P05317	312 aa	Known RBP	4.55	□□□□□ -1.68
UPS3	YDR185C	RPS3	P05750	240 aa	Known RBP	4.55	□□□□□ -1.68
UPS3	YDR185C	CBF1	P17106	351 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	RPB5	P20434	215 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	NAM9	P27929	486 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	YKL187C	P34231	750 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	ATG12	P38316	186 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	CHL4	P38907	458 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	PET8	P38921	284 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	PTI1	P39927	425 aa	Predicted RBP	4.55	□□□□□ -1.68
UPS3	YDR185C	HEM14	P40012	539 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	SMB1	P40018	196 aa	Known RBP	4.55	□□□□□ -1.68
UPS3	YDR185C	YNL194C	P40169	301 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	EGT2	P42835	1041 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	YFR057W	P43625	151 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	CWC23	P52868	283 aa	Predicted RBP	4.55	□□□□□ -1.68
UPS3	YDR185C	FAR10	Q06001	478 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	MHR1	Q06630	226 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	SRL1	Q08673	210 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	YOR114W	Q12219	294 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	SFM1	Q12314	213 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	YCL021W-A	Q96VH3	125 aa		4.55	□□□□□ -1.68
UPS3	YDR185C	RAD9	P14737	1309 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	APA2	P22108	325 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	QRI5	P32344	111 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	ECM4	P36156	370 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	YBR241C	P38142	488 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	RCK1	P38622	512 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	YJR079W	P47126	109 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	IBA57	P47158	497 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	YNL095C	P53932	642 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	TAF9	Q05027	157 aa		4.54	□□□□□ -1.68
UPS3	YDR185C	RPN8	Q08723	338 aa	Known RBP	4.54	□□□□□ -1.68
UPS3	YDR185C	RPL27A	P0C2H6	136 aa	Known RBP	4.53	□□□□□ -1.68
UPS3	YDR185C	RPL27B	P0C2H7	136 aa	Known RBP	4.53	□□□□□ -1.68
UPS3	YDR185C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
UPS3	YDR185C	HOM6	P31116	359 aa	Known RBP	4.53	□□□□□ -1.68
UPS3	YDR185C	RME1	P32338	300 aa	Known RBP	4.53	□□□□□ -1.68
UPS3	YDR185C	MRPL10	P36520	322 aa		4.53	□□□□□ -1.68
UPS3	YDR185C	BMT2	P38278	337 aa		4.53	□□□□□ -1.68
UPS3	YDR185C	URA8	P38627	578 aa	Predicted RBP	4.53	□□□□□ -1.68
UPS3	YDR185C	DSN1	P40568	576 aa		4.53	□□□□□ -1.68
UPS3	YDR185C	HSH155	P49955	971 aa	Known RBP	4.53	□□□□□ -1.68
UPS3	YDR185C	YPS5	P53057	165 aa		4.53	□□□□□ -1.68
UPS3	YDR185C	TPN1	P53099	579 aa		4.53	□□□□□ -1.68
UPS3	YDR185C	VAC7	P53950	1165 aa		4.53	□□□□□ -1.68
UPS3	YDR185C	JID1	Q12350	301 aa		4.53	□□□□□ -1.68
UPS3	YDR185C	BI3	Q9ZZW7	517 aa		4.53	□□□□□ -1.68
UPS3	YDR185C	PET494	P07390	489 aa	Predicted RBP	4.52	□□□□□ -1.69
UPS3	YDR185C	RPS8A	P0CX39	200 aa	Known RBP	4.52	□□□□□ -1.69
UPS3	YDR185C	RPS8B	P0CX40	200 aa	Known RBP	4.52	□□□□□ -1.69
UPS3	YDR185C	YCR102C	P25608	368 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	PEX3	P28795	441 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	TPS2	P31688	896 aa	Known RBP	4.52	□□□□□ -1.69
UPS3	YDR185C	CUE1	P38428	203 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	PTH1	P38876	190 aa	Known RBP	4.52	□□□□□ -1.69
UPS3	YDR185C	BIR1	P47134	954 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	TPC1	P53257	314 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	NRM1	P53718	249 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	CRZ1	P53968	678 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	SEC10	Q06245	871 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	YPL245W	Q12179	454 aa	Known RBP	4.52	□□□□□ -1.69
UPS3	YDR185C	YCT1	Q12235	531 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	SNU23	Q12368	194 aa	Predicted RBP	4.52	□□□□□ -1.69
UPS3	YDR185C	CMC2	Q3E7A4	109 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	NAG1	Q8TGN9	163 aa		4.52	□□□□□ -1.69
UPS3	YDR185C	HTB1	P02293	131 aa	Known RBP	4.51	□□□□□ -1.69
UPS3	YDR185C	HTB2	P02294	131 aa		4.51	□□□□□ -1.69
UPS3	YDR185C	STE7	P06784	515 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms