RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	YHR177W	P38867	453 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	FET3	P38993	636 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	LYS1	P38998	373 aa	RIP-Chip data	0.71	□□□□□ -2.3	not detected
SEC1	YDR164C	TIM17	P39515	158 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YAL037W	P39728	267 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	VPS52	P39904	641 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	GIM4	P40005	111 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	KRE29	P40026	464 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YER137C	P40083	148 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	DDI1	P40087	428 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YNL208W	P40159	199 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	JLP2	P40206	208 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	GAT2	P40209	560 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	LYS12	P40495	371 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	APQ12	P40532	138 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YPS6	P40583	537 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	GCD10	P41814	478 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	AGP3	P43548	558 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	ATG18	P43601	500 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	RPA34	P47006	233 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	APS3	P47064	194 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YJR011C	P47086	261 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	HAM1	P47119	197 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	TOS2	P50078	622 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	PMT5	P52867	743 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	CWC23	P52868	283 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	MPS2	P53159	387 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	PEX31	P53203	462 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YGR042W	P53227	271 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	VOA1	P53262	265 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	PXR1	P53335	271 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	MRPL50	P53724	139 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YIF1	P53845	314 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	CWC25	P53854	179 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	GPI15	P53961	229 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	SAM50	P53969	484 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	DID2	P69771	204 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	BUD25	P85052	153 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	IRC15	Q02733	499 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	GIP3	Q03016	1276 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YDR541C	Q03049	344 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	PIR1	Q03178	341 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	PIR3	Q03180	325 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	TLG1	Q03322	224 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	TRM82	Q03774	444 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	MSS11	Q03825	758 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	GPI17	Q04080	534 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YDR387C	Q04162	555 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YMR111C	Q04461	462 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	YML096W	Q04489	525 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YMR252C	Q04814	134 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YMR315W	Q04869	349 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	PEX10	Q05568	337 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	SSQ1	Q05931	657 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	BNA5	Q05979	453 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	CUR1	Q06469	252 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	MHR1	Q06630	226 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	IPK1	Q06667	281 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	MDM36	Q06820	579 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YLR012C	Q07927	99 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YLR031W	Q07978	186 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	PLB3	Q08108	686 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YPL199C	Q08954	240 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	SAM4	Q08985	325 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	RTC5	Q12108	567 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	SPC3	Q12133	184 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	TIR4	Q12218	487 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	YOR114W	Q12219	294 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	RNH203	Q12338	110 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YOR012W	Q12351	137 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	BBP1	Q12365	385 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	EAF3	Q12432	401 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	AHC1	Q12433	566 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YPR1	Q12458	312 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	PRM4	Q12498	284 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	DCP1	Q12517	231 aa	Predicted RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	MHT1	Q12525	324 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	HTZ1	Q12692	134 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	YLR099W-A	Q3E798	87 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YKL018C-A	Q3E7A7	99 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	SUS1	Q6WNK7	96 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	YOS9	Q99220	542 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	MEX67	Q99257	599 aa	Known RBP	0.71	□□□□□ -2.3
SEC1	YDR164C	MYO1	P08964	1928 aa		0.71	□□□□□ -2.3
SEC1	YDR164C	TRA1	P38811	3744 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	GCN1	P33892	2672 aa	Known RBP	0.7	□□□□□ -2.3
SEC1	YDR164C	YEL009C-A	A0A023PZF2	135 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	ATP6	P00854	259 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	REP1	P03871	373 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	OPI3	P05375	206 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	TPK3	P05986	398 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	RPS14A	P06367	137 aa	Known RBP	0.7	□□□□□ -2.3
SEC1	YDR164C	ADK1	P07170	222 aa	Known RBP	0.7	□□□□□ -2.3
SEC1	YDR164C	PRB1	P09232	635 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	YAR066W	P0CX18	203 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	YHR214W	P0CX19	203 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	RSR1	P13856	272 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	ERD2	P18414	219 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	FAR1	P21268	830 aa		0.7	□□□□□ -2.3
SEC1	YDR164C	GPI12	P23797	304 aa		0.7	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms