RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A ECM13P38195 257 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YBR013CP38215 129 aa-0.26□□□□□ -2.45
TFB5YDR079C-A IML3P38265 245 aa-0.26□□□□□ -2.45
TFB5YDR079C-A AIM4P38305 123 aaPredicted RBP-0.26□□□□□ -2.45
TFB5YDR079C-A DER1P38307 211 aa-0.26□□□□□ -2.45
TFB5YDR079C-A TRR2P38816 342 aa-0.26□□□□□ -2.45
TFB5YDR079C-A SPT8P38915 602 aa-0.26□□□□□ -2.45
TFB5YDR079C-A VPS45P38932 577 aa-0.26□□□□□ -2.45
TFB5YDR079C-A STN1P38960 494 aa-0.26□□□□□ -2.45
TFB5YDR079C-A TEM1P38987 245 aa-0.26□□□□□ -2.45
TFB5YDR079C-A CCT2P39076 527 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A PRP39P39682 629 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A PEX22P39718 180 aa-0.26□□□□□ -2.45
TFB5YDR079C-A THO1P40040 218 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A SSB2P40150 613 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A PDS1P40316 373 aaPredicted RBP-0.26□□□□□ -2.45
TFB5YDR079C-A ATM1P40416 690 aa-0.26□□□□□ -2.45
TFB5YDR079C-A DPH1P40487 425 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A RSM25P40496 264 aa-0.26□□□□□ -2.45
TFB5YDR079C-A HIS6P40545 261 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YNL320WP42840 284 aa-0.26□□□□□ -2.45
TFB5YDR079C-A GCN20P43535 752 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A YJL055WP47044 245 aa-0.26□□□□□ -2.45
TFB5YDR079C-A URB2P47108 1174 aa-0.26□□□□□ -2.45
TFB5YDR079C-A MOG1P47123 218 aa-0.26□□□□□ -2.45
TFB5YDR079C-A HOC1P47124 396 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YJR149WP47177 404 aa-0.26□□□□□ -2.45
TFB5YDR079C-A TCB2P48231 1178 aa-0.26□□□□□ -2.45
TFB5YDR079C-A PRP24P49960 444 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A UBC13P52490 153 aa-0.26□□□□□ -2.45
TFB5YDR079C-A MND1P53102 219 aa-0.26□□□□□ -2.45
TFB5YDR079C-A NSA1P53136 463 aaPredicted RBP-0.26□□□□□ -2.45
TFB5YDR079C-A YGL108CP53139 140 aa-0.26□□□□□ -2.45
TFB5YDR079C-A PNC1P53184 216 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A YGR018CP53211 109 aa-0.26□□□□□ -2.45
TFB5YDR079C-A CLD1P53264 445 aa-0.26□□□□□ -2.45
TFB5YDR079C-A CAF130P53280 1122 aaPredicted RBP-0.26□□□□□ -2.45
TFB5YDR079C-A LSB1P53281 241 aa-0.26□□□□□ -2.45
TFB5YDR079C-A MTM1P53320 366 aa-0.26□□□□□ -2.45
TFB5YDR079C-A OGG1P53397 376 aaPredicted RBP-0.26□□□□□ -2.45
TFB5YDR079C-A RCF2P53721 224 aa-0.26□□□□□ -2.45
TFB5YDR079C-A NOP13P53883 403 aaKnown RBP RIP-Chip data-0.26□□□□□ -2.45not detected
TFB5YDR079C-A YNL143CP53908 130 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YNL095CP53932 642 aa-0.26□□□□□ -2.45
TFB5YDR079C-A COG6P53959 839 aa-0.26□□□□□ -2.45
TFB5YDR079C-A ASI3P53983 676 aa-0.26□□□□□ -2.45
TFB5YDR079C-A PRP38Q00723 242 aaPredicted RBP-0.26□□□□□ -2.45
TFB5YDR079C-A SPR6Q01684 191 aa-0.26□□□□□ -2.45
TFB5YDR079C-A OAZ1Q02803 292 aa-0.26□□□□□ -2.45
TFB5YDR079C-A CWC21Q03375 135 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A VPS60Q03390 229 aa-0.26□□□□□ -2.45
TFB5YDR079C-A RCE1Q03530 315 aa-0.26□□□□□ -2.45
TFB5YDR079C-A BET5Q03630 159 aa-0.26□□□□□ -2.45
TFB5YDR079C-A MIX17Q03667 156 aa-0.26□□□□□ -2.45
TFB5YDR079C-A ENT5Q03769 411 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A YDR239CQ03780 787 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YDR249CQ03787 373 aa-0.26□□□□□ -2.45
TFB5YDR079C-A UPS3Q04006 179 aa-0.26□□□□□ -2.45
TFB5YDR079C-A EMI1Q04406 187 aa-0.26□□□□□ -2.45
TFB5YDR079C-A FIT1Q04433 528 aa-0.26□□□□□ -2.45
TFB5YDR079C-A CSM3Q04659 317 aa-0.26□□□□□ -2.45
TFB5YDR079C-A ERB1Q04660 807 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A INM2Q05533 292 aa-0.26□□□□□ -2.45
TFB5YDR079C-A PHM6Q05637 104 aa-0.26□□□□□ -2.45
TFB5YDR079C-A COQ9Q05779 260 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YPR114WQ06107 315 aa-0.26□□□□□ -2.45
TFB5YDR079C-A RIF2Q06208 395 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YPR172WQ06608 200 aa-0.26□□□□□ -2.45
TFB5YDR079C-A SDO1Q07953 250 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A YOL160WQ08321 113 aa-0.26□□□□□ -2.45
TFB5YDR079C-A SGT1Q08446 395 aa-0.26□□□□□ -2.45
TFB5YDR079C-A SMF3Q12078 473 aaPredicted RBP-0.26□□□□□ -2.45
TFB5YDR079C-A SWT1Q12104 458 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YGK3Q12222 375 aaPredicted RBP-0.26□□□□□ -2.45
TFB5YDR079C-A ATG34Q12292 412 aa-0.26□□□□□ -2.45
TFB5YDR079C-A SFM1Q12314 213 aa-0.26□□□□□ -2.45
TFB5YDR079C-A TIM22Q12328 207 aa-0.26□□□□□ -2.45
TFB5YDR079C-A BBP1Q12365 385 aa-0.26□□□□□ -2.45
TFB5YDR079C-A HMS1Q12398 434 aa-0.26□□□□□ -2.45
TFB5YDR079C-A ARP7Q12406 477 aa-0.26□□□□□ -2.45
TFB5YDR079C-A RTN2Q12443 393 aa-0.26□□□□□ -2.45
TFB5YDR079C-A PEX11Q12462 236 aa-0.26□□□□□ -2.45
TFB5YDR079C-A SEY1Q99287 776 aa-0.26□□□□□ -2.45
TFB5YDR079C-A YOR338WQ99326 363 aa-0.26□□□□□ -2.45
TFB5YDR079C-A AI5_BETAQ9ZZX0 354 aa-0.26□□□□□ -2.45
TFB5YDR079C-A FAS1P07149 2051 aaKnown RBP-0.26□□□□□ -2.45
TFB5YDR079C-A MLP2P40457 1679 aa-0.27□□□□□ -2.45
TFB5YDR079C-A YAR023CD6VPM8 179 aa-0.27□□□□□ -2.45
TFB5YDR079C-A CDC28P00546 298 aaKnown RBP-0.27□□□□□ -2.45
TFB5YDR079C-A RPL39P04650 51 aa-0.27□□□□□ -2.45
TFB5YDR079C-A RPL6BP05739 176 aaKnown RBP-0.27□□□□□ -2.45
TFB5YDR079C-A RPL33AP05744 107 aaKnown RBP-0.27□□□□□ -2.45
TFB5YDR079C-A RHO1P06780 209 aaKnown RBP-0.27□□□□□ -2.45
TFB5YDR079C-A ADK1P07170 222 aaKnown RBP-0.27□□□□□ -2.45
TFB5YDR079C-A CPA1P07258 411 aaKnown RBP-0.27□□□□□ -2.45
TFB5YDR079C-A NUC1P08466 329 aa-0.27□□□□□ -2.45
TFB5YDR079C-A ADH4P10127 382 aa-0.27□□□□□ -2.45
TFB5YDR079C-A COX7P10174 60 aa-0.27□□□□□ -2.45
TFB5YDR079C-A PET122P10355 254 aa-0.27□□□□□ -2.45
TFB5YDR079C-A NHP6BP11633 99 aaKnown RBP-0.27□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms