RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR048CYDR048C ARN2P38724 620 aa0.44□□□□□ -2.34
YDR048CYDR048C DOG1P38774 246 aa0.44□□□□□ -2.34
YDR048CYDR048C TAD2P47058 250 aa0.44□□□□□ -2.34
YDR048CYDR048C YOR114WQ12219 294 aa0.44□□□□□ -2.34
YDR048CYDR048C DCN1Q12395 269 aa0.44□□□□□ -2.34
YDR048CYDR048C YPR064WQ12492 139 aa0.44□□□□□ -2.34
YDR048CYDR048C RAD3P06839 778 aa0.43□□□□□ -2.34
YDR048CYDR048C COS2P0CX12 379 aa0.43□□□□□ -2.34
YDR048CYDR048C COS3P0CX13 379 aa0.43□□□□□ -2.34
YDR048CYDR048C TAL1P15019 335 aaKnown RBP0.43□□□□□ -2.34
YDR048CYDR048C MSS116P15424 664 aaKnown RBP0.43□□□□□ -2.34
YDR048CYDR048C SUA5P32579 426 aa0.43□□□□□ -2.34
YDR048CYDR048C TEM1P38987 245 aa0.43□□□□□ -2.34
YDR048CYDR048C FMP41P53889 259 aaKnown RBP0.43□□□□□ -2.34
YDR048CYDR048C DPP1Q05521 289 aa0.43□□□□□ -2.34
YDR048CYDR048C RRP42Q12277 265 aaPredicted RBP0.43□□□□□ -2.34
YDR048CYDR048C GEP5Q12393 293 aa0.43□□□□□ -2.34
YDR048CYDR048C FRE6Q12473 712 aa0.43□□□□□ -2.34
YDR048CYDR048C SAS5Q99314 248 aa0.43□□□□□ -2.34
YDR048CYDR048C FBA1P14540 359 aaKnown RBP0.42□□□□□ -2.34
YDR048CYDR048C MDH2P22133 377 aa0.42□□□□□ -2.34
YDR048CYDR048C RXT2P38255 430 aa0.42□□□□□ -2.34
YDR048CYDR048C AGX1P43567 385 aa0.42□□□□□ -2.34
YDR048CYDR048C MDM34P53083 459 aa0.42□□□□□ -2.34
YDR048CYDR048C PRM15Q03262 622 aa0.42□□□□□ -2.34
YDR048CYDR048C SDC1Q03323 175 aa0.42□□□□□ -2.34
YDR048CYDR048C LOA1Q06508 300 aa0.42□□□□□ -2.34
YDR048CYDR048C SAM4Q08985 325 aaKnown RBP0.42□□□□□ -2.34
YDR048CYDR048C APC9Q12107 265 aa0.42□□□□□ -2.34
YDR048CYDR048C PET494P07390 489 aaPredicted RBP0.41□□□□□ -2.34
YDR048CYDR048C FPR1P20081 114 aaKnown RBP0.41□□□□□ -2.34
YDR048CYDR048C RNP1P32385 249 aa0.41□□□□□ -2.34
YDR048CYDR048C NIF3P53081 288 aa0.41□□□□□ -2.34
YDR048CYDR048C CUE3P53137 624 aaKnown RBP0.41□□□□□ -2.34
YDR048CYDR048C RSM10Q03201 203 aa0.41□□□□□ -2.34
YDR048CYDR048C PEX10Q05568 337 aa0.41□□□□□ -2.34
YDR048CYDR048C PBP4Q07362 185 aaKnown RBP0.41□□□□□ -2.34
YDR048CYDR048C YPR1Q12458 312 aa0.41□□□□□ -2.34
YDR048CYDR048C MHT1Q12525 324 aa0.41□□□□□ -2.34
YDR048CYDR048C YER188C-AP0C0V2 99 aa0.4□□□□□ -2.35
YDR048CYDR048C RPL2AP0CX45 254 aaKnown RBP0.4□□□□□ -2.35
YDR048CYDR048C RPL2BP0CX46 254 aaKnown RBP0.4□□□□□ -2.35
YDR048CYDR048C GAL3P13045 520 aa0.4□□□□□ -2.35
YDR048CYDR048C VMA2P16140 517 aaKnown RBP0.4□□□□□ -2.35
YDR048CYDR048C PEX4P29340 183 aa0.4□□□□□ -2.35
YDR048CYDR048C BMT5P40493 336 aa0.4□□□□□ -2.35
YDR048CYDR048C ASI3P53983 676 aa0.4□□□□□ -2.35
YDR048CYDR048C VPS60Q03390 229 aa0.4□□□□□ -2.35
YDR048CYDR048C TAF9Q05027 157 aa0.4□□□□□ -2.35
YDR048CYDR048C DSF1P0CX08 502 aa0.39□□□□□ -2.35
YDR048CYDR048C YNR073CP0CX09 502 aa0.39□□□□□ -2.35
YDR048CYDR048C RPS0AP32905 252 aaKnown RBP0.39□□□□□ -2.35
YDR048CYDR048C RPC37P36121 282 aa0.39□□□□□ -2.35
YDR048CYDR048C AVT2P39981 480 aa0.39□□□□□ -2.35
YDR048CYDR048C OST2P46964 130 aa0.39□□□□□ -2.35
YDR048CYDR048C YJL028WP47062 111 aa0.39□□□□□ -2.35
YDR048CYDR048C TRM44Q02648 567 aaKnown RBP0.39□□□□□ -2.35
YDR048CYDR048C YMR209CQ03648 457 aa0.39□□□□□ -2.35
YDR048CYDR048C POT1P27796 417 aaKnown RBP RIP-Chip data0.38□□□□□ -2.35not detected
YDR048CYDR048C SPT4P32914 102 aaPredicted RBP0.38□□□□□ -2.35
YDR048CYDR048C UPS2P35200 230 aa0.38□□□□□ -2.35
YDR048CYDR048C YKL063CP35725 167 aa0.38□□□□□ -2.35
YDR048CYDR048C KDX1P36005 433 aa0.38□□□□□ -2.35
YDR048CYDR048C LAS1P36146 502 aaPredicted RBP0.38□□□□□ -2.35
YDR048CYDR048C ECM13P38195 257 aa0.38□□□□□ -2.35
YDR048CYDR048C SIF2P38262 535 aa0.38□□□□□ -2.35
YDR048CYDR048C YBR219CP38317 127 aa0.38□□□□□ -2.35
YDR048CYDR048C RCY1P39531 840 aa0.38□□□□□ -2.35
YDR048CYDR048C SMD3P43321 101 aaKnown RBP0.38□□□□□ -2.35
YDR048CYDR048C COX16P47081 118 aa0.38□□□□□ -2.35
YDR048CYDR048C IBA57P47158 497 aa0.38□□□□□ -2.35
YDR048CYDR048C PDR16P53860 351 aaKnown RBP0.38□□□□□ -2.35
YDR048CYDR048C YPL077CQ02831 240 aa0.38□□□□□ -2.35
YDR048CYDR048C MRPS8Q03799 155 aa0.38□□□□□ -2.35
YDR048CYDR048C YMR316C-AI2HB70 103 aa0.37□□□□□ -2.35
YDR048CYDR048C ATP6P00854 259 aa0.37□□□□□ -2.35
YDR048CYDR048C RPS3P05750 240 aaKnown RBP0.37□□□□□ -2.35
YDR048CYDR048C DDI2P0CH63 225 aa0.37□□□□□ -2.35
YDR048CYDR048C DDI3P0CH64 225 aa0.37□□□□□ -2.35
YDR048CYDR048C CAM1P29547 415 aaKnown RBP0.37□□□□□ -2.35
YDR048CYDR048C SWC5P38326 303 aa0.37□□□□□ -2.35
YDR048CYDR048C FET3P38993 636 aa0.37□□□□□ -2.35
YDR048CYDR048C NPT1P39683 429 aaKnown RBP0.37□□□□□ -2.35
YDR048CYDR048C VTC1P40046 129 aaRIP-Chip data0.37□□□□□ -2.35not detected
YDR048CYDR048C GTO1P48239 356 aa0.37□□□□□ -2.35
YDR048CYDR048C KEL2P50090 882 aa0.37□□□□□ -2.35
YDR048CYDR048C MEU1Q07938 337 aaKnown RBP RIP-Chip data0.37□□□□□ -2.35not detected
YDR048CYDR048C CSI2Q08054 341 aa0.37□□□□□ -2.35
YDR048CYDR048C RIO1Q12196 484 aaKnown RBP0.37□□□□□ -2.35
YDR048CYDR048C PAA1Q12447 191 aaKnown RBP0.37□□□□□ -2.35
YDR048CYDR048C SWD2P36104 329 aaPredicted RBP0.36□□□□□ -2.35
YDR048CYDR048C YHR022CP38763 256 aa0.36□□□□□ -2.35
YDR048CYDR048C SHC1P39000 512 aa0.36□□□□□ -2.35
YDR048CYDR048C RPL13BP40212 199 aaKnown RBP0.36□□□□□ -2.35
YDR048CYDR048C CDC40P40968 455 aaPredicted RBP0.36□□□□□ -2.35
YDR048CYDR048C ERG25P53045 309 aa0.36□□□□□ -2.35
YDR048CYDR048C CYT2Q00873 224 aa0.36□□□□□ -2.35
YDR048CYDR048C BOP2Q06150 570 aa0.36□□□□□ -2.35
YDR048CYDR048C YLR162WQ06235 118 aa0.36□□□□□ -2.35
YDR048CYDR048C PML1Q07930 204 aaPredicted RBP0.36□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 156.6 ms