RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C ARP5P53946 755 aa1.88□□□□□ -2.11
PBP4YDL053C YPL039WQ03080 316 aa1.88□□□□□ -2.11
PBP4YDL053C BCP1Q06338 283 aa1.88□□□□□ -2.11
PBP4YDL053C LOA1Q06508 300 aa1.88□□□□□ -2.11
PBP4YDL053C GRX3Q03835 250 aa1.87□□□□□ -2.11
PBP4YDL053C FCF1Q05498 189 aaPredicted RBP1.87□□□□□ -2.11
PBP4YDL053C AGC1Q12482 902 aa1.87□□□□□ -2.11
PBP4YDL053C YMR316C-AI2HB70 103 aa1.86□□□□□ -2.11
PBP4YDL053C TDH1P00360 332 aaKnown RBP1.86□□□□□ -2.11
PBP4YDL053C RPS3P05750 240 aaKnown RBP1.86□□□□□ -2.11
PBP4YDL053C SNF6P18888 332 aa1.86□□□□□ -2.11
PBP4YDL053C DBP3P20447 523 aaKnown RBP1.86□□□□□ -2.11
PBP4YDL053C MEK1P24719 497 aaPredicted RBP1.86□□□□□ -2.11
PBP4YDL053C RRT12P25381 491 aa1.86□□□□□ -2.11
PBP4YDL053C ATG12P38316 186 aa1.86□□□□□ -2.11
PBP4YDL053C PEX31P53203 462 aa1.86□□□□□ -2.11
PBP4YDL053C CPD1P53314 239 aa1.86□□□□□ -2.11
PBP4YDL053C SDC1Q03323 175 aa1.86□□□□□ -2.11
PBP4YDL053C YPL150WQ12152 901 aa1.86□□□□□ -2.11
PBP4YDL053C YBL112CQ3E7Y4 105 aa1.86□□□□□ -2.11
PBP4YDL053C RPC40P07703 335 aaKnown RBP1.85□□□□□ -2.11
PBP4YDL053C CAM1P29547 415 aaKnown RBP1.85□□□□□ -2.11
PBP4YDL053C COY1P34237 679 aa1.85□□□□□ -2.11
PBP4YDL053C ARN2P38724 620 aa1.85□□□□□ -2.11
PBP4YDL053C YJR141WP47172 347 aaPredicted RBP1.85□□□□□ -2.11
PBP4YDL053C TLG1Q03322 224 aa1.85□□□□□ -2.11
PBP4YDL053C YMR166CQ03829 368 aa1.85□□□□□ -2.11
PBP4YDL053C VBA1Q04301 562 aa1.85□□□□□ -2.11
PBP4YDL053C CTS2Q06350 511 aa1.85□□□□□ -2.11
PBP4YDL053C YLR413WQ06689 675 aa1.85□□□□□ -2.11
PBP4YDL053C YOL019WQ08157 551 aa1.85□□□□□ -2.11
PBP4YDL053C MRPL23Q12487 163 aaPredicted RBP1.85□□□□□ -2.11
PBP4YDL053C ISD11Q6Q560 94 aa1.85□□□□□ -2.11
PBP4YDL053C YEL009C-AA0A023PZF2 135 aa1.84□□□□□ -2.11
PBP4YDL053C YAL064W-BO13512 126 aa1.84□□□□□ -2.11
PBP4YDL053C YSR3P23501 404 aa1.84□□□□□ -2.11
PBP4YDL053C TOM40P23644 387 aaKnown RBP1.84□□□□□ -2.11
PBP4YDL053C ICL1P28240 557 aaPredicted RBP1.84□□□□□ -2.11
PBP4YDL053C PEX3P28795 441 aa1.84□□□□□ -2.11
PBP4YDL053C CSG2P35206 410 aa1.84□□□□□ -2.11
PBP4YDL053C HMT1P38074 348 aa1.84□□□□□ -2.11
PBP4YDL053C YHI9P38765 294 aa1.84□□□□□ -2.11
PBP4YDL053C SER33P40510 469 aa1.84□□□□□ -2.11
PBP4YDL053C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
PBP4YDL053C TRM44Q02648 567 aaKnown RBP1.84□□□□□ -2.11
PBP4YDL053C SFH1Q06168 426 aa1.84□□□□□ -2.11
PBP4YDL053C SEC10Q06245 871 aa1.84□□□□□ -2.11
PBP4YDL053C RDS3Q06835 107 aaPredicted RBP1.84□□□□□ -2.11
PBP4YDL053C FMP16Q12497 93 aa1.84□□□□□ -2.11
PBP4YDL053C DAL80P26343 269 aa1.83□□□□□ -2.12
PBP4YDL053C BMH1P29311 267 aaKnown RBP1.83□□□□□ -2.12
PBP4YDL053C EBP2P36049 427 aaKnown RBP1.83□□□□□ -2.12
PBP4YDL053C RTT105P40063 208 aa1.83□□□□□ -2.12
PBP4YDL053C MNN5P46982 586 aa1.83□□□□□ -2.12
PBP4YDL053C FMP33P46998 180 aa1.83□□□□□ -2.12
PBP4YDL053C CDC14Q00684 551 aa1.83□□□□□ -2.12
PBP4YDL053C PLB3Q08108 686 aa1.83□□□□□ -2.12
PBP4YDL053C VPS68Q12016 184 aa1.83□□□□□ -2.12
PBP4YDL053C RRP36Q12481 300 aaPredicted RBP1.83□□□□□ -2.12
PBP4YDL053C YIL002W-AQ3E7Z5 69 aa1.83□□□□□ -2.12
PBP4YDL053C YOS9Q99220 542 aa1.83□□□□□ -2.12
PBP4YDL053C RPP0P05317 312 aaKnown RBP1.82□□□□□ -2.12
PBP4YDL053C RPL26AP05743 127 aaKnown RBP1.82□□□□□ -2.12
PBP4YDL053C DPM1P14020 267 aaKnown RBP1.82□□□□□ -2.12
PBP4YDL053C OM45P16547 393 aa1.82□□□□□ -2.12
PBP4YDL053C POF1P25576 258 aa1.82□□□□□ -2.12
PBP4YDL053C CLB6P32943 380 aa1.82□□□□□ -2.12
PBP4YDL053C YKL070WP36087 169 aa1.82□□□□□ -2.12
PBP4YDL053C YJR146WP47174 117 aa1.82□□□□□ -2.12
PBP4YDL053C DSK2P48510 373 aa1.82□□□□□ -2.12
PBP4YDL053C MND1P53102 219 aa1.82□□□□□ -2.12
PBP4YDL053C RPL26BP53221 127 aaKnown RBP1.82□□□□□ -2.12
PBP4YDL053C LSB1P53281 241 aa1.82□□□□□ -2.12
PBP4YDL053C ERV25P54837 211 aaKnown RBP1.82□□□□□ -2.12
PBP4YDL053C TIM11P81449 96 aaPredicted RBP1.82□□□□□ -2.12
PBP4YDL053C YOR268CQ08734 132 aa1.82□□□□□ -2.12
PBP4YDL053C NOT5Q12514 560 aaPredicted RBP1.82□□□□□ -2.12
PBP4YDL053C AI5_BETAQ9ZZX0 354 aa1.82□□□□□ -2.12
PBP4YDL053C INO80P53115 1489 aa1.82□□□□□ -2.12
PBP4YDL053C RAD10P06838 210 aa1.81□□□□□ -2.12
PBP4YDL053C COS2P0CX12 379 aa1.81□□□□□ -2.12
PBP4YDL053C COS3P0CX13 379 aa1.81□□□□□ -2.12
PBP4YDL053C RIB7P33312 244 aa1.81□□□□□ -2.12
PBP4YDL053C MRX5P47007 382 aa1.81□□□□□ -2.12
PBP4YDL053C EGD1Q02642 157 aaKnown RBP1.81□□□□□ -2.12
PBP4YDL053C GRH1Q04410 372 aaKnown RBP1.81□□□□□ -2.12
PBP4YDL053C ARV1Q06541 321 aa1.81□□□□□ -2.12
PBP4YDL053C QCR6P00127 147 aa1.8□□□□□ -2.12
PBP4YDL053C PEX18P38855 283 aa1.8□□□□□ -2.12
PBP4YDL053C SPT8P38915 602 aa1.8□□□□□ -2.12
PBP4YDL053C BFR1P38934 470 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
PBP4YDL053C NPT1P39683 429 aaKnown RBP1.8□□□□□ -2.12
PBP4YDL053C SPP2Q02521 185 aa1.8□□□□□ -2.12
PBP4YDL053C CWC21Q03375 135 aaKnown RBP1.8□□□□□ -2.12
PBP4YDL053C MYO5Q04439 1219 aaKnown RBP1.8□□□□□ -2.12
PBP4YDL053C RNH1Q04740 348 aa1.8□□□□□ -2.12
PBP4YDL053C SUE1Q06524 206 aa1.8□□□□□ -2.12
PBP4YDL053C PER33Q12144 273 aa1.8□□□□□ -2.12
PBP4YDL053C YPL247CQ12523 523 aa1.8□□□□□ -2.12
PBP4YDL053C RPL4AP10664 362 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms