RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C TAD2P47058 250 aa3.29□□□□□ -1.88
YPK3YBR028C SWS2P53937 143 aa3.29□□□□□ -1.88
YPK3YBR028C CWC21Q03375 135 aaKnown RBP3.29□□□□□ -1.88
YPK3YBR028C OST6Q03723 332 aa3.29□□□□□ -1.88
YPK3YBR028C YPR195CQ06594 109 aa3.29□□□□□ -1.88
YPK3YBR028C RPS23AP0CX29 145 aaKnown RBP3.29□□□□□ -1.88
YPK3YBR028C RPS23BP0CX30 145 aa3.29□□□□□ -1.88
YPK3YBR028C PEX3P28795 441 aa3.29□□□□□ -1.88
YPK3YBR028C CAT2P32796 670 aaKnown RBP3.29□□□□□ -1.88
YPK3YBR028C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
YPK3YBR028C BFR1P38934 470 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88 RIP-Chip
YPK3YBR028C DXO1Q06349 442 aa3.29□□□□□ -1.88
YPK3YBR028C YPR172WQ06608 200 aa3.29□□□□□ -1.88
YPK3YBR028C ATG5Q12380 294 aa3.29□□□□□ -1.88
YPK3YBR028C PRM7Q12459 698 aa3.29□□□□□ -1.88
YPK3YBR028C YOS9Q99220 542 aa3.29□□□□□ -1.88
YPK3YBR028C FAB1P34756 2278 aa3.28□□□□□ -1.88
YPK3YBR028C CHD1P32657 1468 aa3.28□□□□□ -1.88
YPK3YBR028C RAD51P25454 400 aa3.28□□□□□ -1.88
YPK3YBR028C KRE6P32486 720 aa3.28□□□□□ -1.88
YPK3YBR028C DDI1P40087 428 aa3.28□□□□□ -1.88
YPK3YBR028C NBP35P52920 328 aa3.28□□□□□ -1.88
YPK3YBR028C SWT21P53873 357 aaPredicted RBP3.28□□□□□ -1.88
YPK3YBR028C ATC1Q04005 294 aa3.28□□□□□ -1.88
YPK3YBR028C CTS2Q06350 511 aa3.28□□□□□ -1.88
YPK3YBR028C PER33Q12144 273 aa3.28□□□□□ -1.88
YPK3YBR028C YOL107WQ12239 342 aa3.28□□□□□ -1.88
YPK3YBR028C IES3Q12345 250 aa3.28□□□□□ -1.88
YPK3YBR028C YMR316C-AI2HB70 103 aa3.27□□□□□ -1.89
YPK3YBR028C MSF1P08425 469 aa3.27□□□□□ -1.89
YPK3YBR028C OSM1P21375 501 aaKnown RBP3.27□□□□□ -1.89
YPK3YBR028C VPS1P21576 704 aaKnown RBP3.27□□□□□ -1.89
YPK3YBR028C CAB3P36076 571 aa3.27□□□□□ -1.89
YPK3YBR028C MED8P38304 223 aa3.27□□□□□ -1.89
YPK3YBR028C SPT8P38915 602 aa3.27□□□□□ -1.89
YPK3YBR028C NBP1P52919 319 aaPredicted RBP3.27□□□□□ -1.89
YPK3YBR028C NNT1Q05874 261 aa3.27□□□□□ -1.89
YPK3YBR028C CTR3Q06686 241 aa3.27□□□□□ -1.89
YPK3YBR028C HIS1P00498 297 aaKnown RBP3.26□□□□□ -1.89
YPK3YBR028C RSR1P13856 272 aa3.26□□□□□ -1.89
YPK3YBR028C YAK1P14680 807 aa3.26□□□□□ -1.89
YPK3YBR028C RRT12P25381 491 aa3.26□□□□□ -1.89
YPK3YBR028C SME1Q12330 94 aaPredicted RBP3.26□□□□□ -1.89
YPK3YBR028C AI5_BETAQ9ZZX0 354 aa3.26□□□□□ -1.89
YPK3YBR028C ALK2P32789 676 aaPredicted RBP3.25□□□□□ -1.89
YPK3YBR028C PHO89P38361 574 aa3.25□□□□□ -1.89
YPK3YBR028C SMC2P38989 1170 aaKnown RBP3.25□□□□□ -1.89
YPK3YBR028C SHC1P39000 512 aa3.25□□□□□ -1.89
YPK3YBR028C AGX1P43567 385 aa3.25□□□□□ -1.89
YPK3YBR028C MAL13P53338 473 aa3.25□□□□□ -1.89
YPK3YBR028C YNL095CP53932 642 aa3.25□□□□□ -1.89
YPK3YBR028C RRN5Q02983 363 aa3.25□□□□□ -1.89
YPK3YBR028C YPR063CQ12160 140 aa3.25□□□□□ -1.89
YPK3YBR028C YOL163WP0CF20 169 aa3.25□□□□□ -1.89
YPK3YBR028C CAM1P29547 415 aaKnown RBP3.25□□□□□ -1.89
YPK3YBR028C COY1P34237 679 aa3.25□□□□□ -1.89
YPK3YBR028C ECM14P38836 430 aa3.25□□□□□ -1.89
YPK3YBR028C ALG11P53954 548 aaKnown RBP3.25□□□□□ -1.89
YPK3YBR028C YPL039WQ03080 316 aa3.25□□□□□ -1.89
YPK3YBR028C STH1P32597 1359 aa3.24□□□□□ -1.89
YPK3YBR028C CWP1P28319 239 aa3.24□□□□□ -1.89
YPK3YBR028C NTG1P31378 399 aa3.24□□□□□ -1.89
YPK3YBR028C ERG2P32352 222 aa3.24□□□□□ -1.89
YPK3YBR028C HMT1P38074 348 aa3.24□□□□□ -1.89
YPK3YBR028C ECO1P43605 281 aa3.24□□□□□ -1.89
YPK3YBR028C NUP84P52891 726 aa3.24□□□□□ -1.89
YPK3YBR028C TIM21P53220 239 aa3.24□□□□□ -1.89
YPK3YBR028C APJ1P53940 528 aa3.24□□□□□ -1.89
YPK3YBR028C TVP15Q03860 143 aa3.24□□□□□ -1.89
YPK3YBR028C ADH6Q04894 360 aaKnown RBP3.24□□□□□ -1.89
YPK3YBR028C PRR2Q12310 699 aa3.24□□□□□ -1.89
YPK3YBR028C COS2P0CX12 379 aa3.23□□□□□ -1.89
YPK3YBR028C COS3P0CX13 379 aa3.23□□□□□ -1.89
YPK3YBR028C RPL4AP10664 362 aaKnown RBP3.23□□□□□ -1.89
YPK3YBR028C ARN2P38724 620 aa3.23□□□□□ -1.89
YPK3YBR028C BIG1P38813 335 aa3.23□□□□□ -1.89
YPK3YBR028C RPL4BP49626 362 aaKnown RBP3.23□□□□□ -1.89
YPK3YBR028C BTS1Q12051 335 aa3.23□□□□□ -1.89
YPK3YBR028C PAN1P32521 1480 aa3.23□□□□□ -1.89
YPK3YBR028C DAL82P21705 255 aa3.22□□□□□ -1.89
YPK3YBR028C TKL2P33315 681 aa3.22□□□□□ -1.89
YPK3YBR028C HEK2P38199 381 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
YPK3YBR028C TRM7P38238 310 aaKnown RBP3.22□□□□□ -1.89
YPK3YBR028C PRS2P38620 318 aaKnown RBP3.22□□□□□ -1.89
YPK3YBR028C YHL049CP38722 271 aa3.22□□□□□ -1.89
YPK3YBR028C RPE1P46969 238 aa3.22□□□□□ -1.89
YPK3YBR028C YNL134CP53912 376 aaKnown RBP3.22□□□□□ -1.89
YPK3YBR028C YMR166CQ03829 368 aa3.22□□□□□ -1.89
YPK3YBR028C RUD3Q12234 484 aaKnown RBP3.22□□□□□ -1.89
YPK3YBR028C YBL112CQ3E7Y4 105 aa3.22□□□□□ -1.89
YPK3YBR028C MER1P16523 270 aa3.21□□□□□ -1.89
YPK3YBR028C CSG2P35206 410 aa3.21□□□□□ -1.89
YPK3YBR028C PRS4P38063 326 aaPredicted RBP3.21□□□□□ -1.89
YPK3YBR028C DSN1P40568 576 aa3.21□□□□□ -1.89
YPK3YBR028C YJR012CP47087 207 aa3.21□□□□□ -1.89
YPK3YBR028C YLR173WQ06247 608 aa3.21□□□□□ -1.89
YPK3YBR028C SDO1Q07953 250 aaKnown RBP3.21□□□□□ -1.89
YPK3YBR028C MRP1P10662 321 aaKnown RBP3.21□□□□□ -1.9
YPK3YBR028C QRI5P32344 111 aa3.21□□□□□ -1.9
YPK3YBR028C SPO73P40031 143 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms