RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 DYMQ7RTS9 669 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 ZNF720Q7Z2F6 126 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 SPRED2Q7Z698 418 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 MAP4K3Q8IVH8 894 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 COLGALT1Q8NBJ5 622 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 MRPL38Q96DV4 380 aaKnown RBP18.54■□□□□ 0.56
VAT1-204ENST00000587147 ZNF558Q96NG5 402 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 ZHX3Q9H4I2 956 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 TBC1D13Q9NVG8 400 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 MTCH2Q9Y6C9 303 aa18.54■□□□□ 0.56
VAT1-204ENST00000587147 ARL5CA6NH57 179 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 MEIS3P2A8K0S8 358 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 PPP1R37O75864 691 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 LIG1P18858 919 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 GRM5P41594 1212 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 ALDH7A1P49419 539 aaKnown RBP18.53■□□□□ 0.56
VAT1-204ENST00000587147 PLCB3Q01970 1234 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 ZNF568Q3ZCX4 644 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 KCNT2Q6UVM3 1135 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 STXBP4Q6ZWJ1 553 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 GDPD5Q8WTR4 605 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 MRPS27Q92552 414 aaKnown RBP18.53■□□□□ 0.56
VAT1-204ENST00000587147 CCDC34Q96HJ3 373 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 TMEM175Q9BSA9 504 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 TARS2Q9BW92 718 aaKnown RBP18.53■□□□□ 0.56
VAT1-204ENST00000587147 STRA6Q9BX79 667 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 TOPORSQ9NS56 1045 aaPredicted RBP18.53■□□□□ 0.56
VAT1-204ENST00000587147 PANK4Q9NVE7 773 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 PLAGL2Q9UPG8 496 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 PCDHB13Q9Y5F0 798 aa18.53■□□□□ 0.56
VAT1-204ENST00000587147 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.53■□□□□ 0.56
VAT1-204ENST00000587147 PVALEFA0A1B0GWK0 134 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 ABLIM1O14639 778 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 IDEP14735 1019 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 SYKP43405 635 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 RNASELQ05823 741 aaKnown RBP18.52■□□□□ 0.56
VAT1-204ENST00000587147 MCL1Q07820 350 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 GRIK3Q13003 919 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 NOLC1Q14978 699 aaKnown RBP eCLIP18.52■□□□□ 0.56
VAT1-204ENST00000587147 TIGD5Q53EQ6 642 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 HERC4Q5GLZ8 1057 aaPredicted RBP18.52■□□□□ 0.56
VAT1-204ENST00000587147 EEF1DP3Q658K8 133 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 PDE12Q6L8Q7 609 aaKnown RBP18.52■□□□□ 0.56
VAT1-204ENST00000587147 SFR1Q86XK3 245 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 CDT1Q9H211 546 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 MRPL44Q9H9J2 332 aaKnown RBP18.52■□□□□ 0.56
VAT1-204ENST00000587147 EXOC7Q9UPT5 735 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 HES2Q9Y543 173 aa18.52■□□□□ 0.56
VAT1-204ENST00000587147 TDRD15B5MCY1 1934 aaKnown RBP18.52■□□□□ 0.56
VAT1-204ENST00000587147 A0A1B0GVL5 298 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 HNRNPDLO14979 420 aaKnown RBP18.51■□□□□ 0.55
VAT1-204ENST00000587147 CLDN3O15551 220 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 ACTN4O43707 911 aaKnown RBP18.51■□□□□ 0.55
VAT1-204ENST00000587147 IGFBP4P22692 258 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 MLH1P40692 756 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 LIG4P49917 911 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 POU5F1Q01860 360 aaKnown RBP18.51■□□□□ 0.55
VAT1-204ENST00000587147 KRT17Q04695 432 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 DSC1Q08554 894 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 UNC13DQ70J99 1090 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 CDR2LQ86X02 465 aaPredicted RBP18.51■□□□□ 0.55
VAT1-204ENST00000587147 KLHL23Q8NBE8 558 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 MAFAQ8NHW3 353 aaPredicted RBP18.51■□□□□ 0.55
VAT1-204ENST00000587147 SPPL3Q8TCT6 385 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 BICD1Q96G01 975 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 FAM193BQ96PV7 902 aaPredicted RBP18.51■□□□□ 0.55
VAT1-204ENST00000587147 RPS6KC1Q96S38 1066 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 GAD1Q99259 594 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 TCHPQ9BT92 498 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 CCDC94Q9BW85 323 aaPredicted RBP18.51■□□□□ 0.55
VAT1-204ENST00000587147 RNF39Q9H2S5 420 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 SPG21Q9NZD8 308 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 INPP5FQ9Y2H2 1132 aa18.51■□□□□ 0.55
VAT1-204ENST00000587147 GOLGA6L4A6NEF3 574 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 RFXAPO00287 272 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 NR1I2O75469 434 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 FGF18O76093 207 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 RECQL4O94761 1208 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 ITGB1P05556 798 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 NMT1P30419 496 aaKnown RBP18.5■□□□□ 0.55
VAT1-204ENST00000587147 YARSP54577 528 aaKnown RBP18.5■□□□□ 0.55
VAT1-204ENST00000587147 BCAR1P56945 870 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 ASIC1P78348 528 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 L1TD1Q5T7N2 865 aaKnown RBP18.5■□□□□ 0.55
VAT1-204ENST00000587147 SLFN12LQ6IEE8 588 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 KANK3Q6NY19 840 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 THNSL1Q8IYQ7 743 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 SLC39A11Q8N1S5 342 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 FSIP1Q8NA03 581 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 GSTCDQ8NEC7 633 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 CHAMP1Q96JM3 812 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 TSPAN18Q96SJ8 248 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 NRDE2Q9H7Z3 1164 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 TMEM206Q9H813 350 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 PARP2Q9UGN5 583 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 PUF60Q9UHX1 559 aaKnown RBP18.5■□□□□ 0.55
VAT1-204ENST00000587147 STYXL1Q9Y6J8 313 aa18.5■□□□□ 0.55
VAT1-204ENST00000587147 FSD2A1L4K1 749 aa18.49■□□□□ 0.55
VAT1-204ENST00000587147 EIF3DO15371 548 aaKnown RBP eCLIP18.49■□□□□ 0.55
VAT1-204ENST00000587147 AKAP5P24588 427 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms