RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CPB2Q96IY4 423 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 TSPAN18Q96SJ8 248 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 OSBPL7Q9BZF2 842 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 SEMA6BQ9H3T3 888 aa25.62■■□□□ 1.69
RAB40C-212ENST00000569575 ZMYND8Q9ULU4 1186 aaPredicted RBP25.62■■□□□ 1.69
RAB40C-212ENST00000569575 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.62■■□□□ 1.69
RAB40C-212ENST00000569575 C9IYK1 514 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 ANKRD63C9JTQ0 380 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 EDN1P05305 212 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 SYN1P17600 705 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 ADSSP30520 456 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 MATR3P43243 847 aaKnown RBP eCLIP25.61■■□□□ 1.69
RAB40C-212ENST00000569575 VWCEQ96DN2 955 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 MSTO1Q9BUK6 570 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 CDT1Q9H211 546 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 DMAC2Q9NW81 257 aa25.61■■□□□ 1.69
RAB40C-212ENST00000569575 AGO2Q9UKV8 859 aaKnown RBP25.61■■□□□ 1.69
RAB40C-212ENST00000569575 TTLL13PA6NNM8 815 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 CLTAP09496 248 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 STAG3L1P0CL83 205 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 GRM5P41594 1212 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 ENPEPQ07075 957 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 UBXN11Q5T124 520 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 LRSAM1Q6UWE0 723 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 XXYLT1Q8NBI6 393 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 ENOX1Q8TC92 643 aaKnown RBP25.6■■□□□ 1.69
RAB40C-212ENST00000569575 NOC3LQ8WTT2 800 aaKnown RBP25.6■■□□□ 1.69
RAB40C-212ENST00000569575 FBXL18Q96ME1 805 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 CEP63Q96MT8 703 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 MKNK1Q9BUB5 465 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 CCDC94Q9BW85 323 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-212ENST00000569575 ANKFY1Q9P2R3 1169 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 PCDHB2Q9Y5E7 798 aa25.6■■□□□ 1.69
RAB40C-212ENST00000569575 CETN3O15182 167 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 HOXA2O43364 376 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 EXTL3O43909 919 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 GNA14O95837 355 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 NR3C1P04150 777 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 PRKCSHP14314 528 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-212ENST00000569575 EEF1DP3Q658K8 133 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 ANKRD40Q6AI12 368 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 KLHL10Q6JEL2 608 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 TTI2Q6NXR4 508 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 RTN4RL1Q86UN2 441 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-212ENST00000569575 CD302Q8IX05 232 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 ZC3H3Q8IXZ2 948 aaKnown RBP25.59■■□□□ 1.69
RAB40C-212ENST00000569575 GPD1LQ8N335 351 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 HERVK_113Q902F9 699 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 PLEKHA5Q9HAU0 1116 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 TOPORSQ9NS56 1045 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-212ENST00000569575 TMEM161AQ9NX61 479 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 FRMD4BQ9Y2L6 1034 aa25.59■■□□□ 1.69
RAB40C-212ENST00000569575 AMHP03971 560 aa25.58■■□□□ 1.69
RAB40C-212ENST00000569575 MLLT1Q03111 559 aaPredicted RBP25.58■■□□□ 1.69
RAB40C-212ENST00000569575 ADAM9Q13443 819 aa25.58■■□□□ 1.69
RAB40C-212ENST00000569575 SURF1Q15526 300 aa25.58■■□□□ 1.69
RAB40C-212ENST00000569575 TMEM240Q5SV17 173 aa25.58■■□□□ 1.69
RAB40C-212ENST00000569575 USP37Q86T82 979 aa25.58■■□□□ 1.69
RAB40C-212ENST00000569575 PHOSPHO2Q8TCD6 241 aa25.58■■□□□ 1.69
RAB40C-212ENST00000569575 ZBTB45Q96K62 511 aaPredicted RBP25.58■■□□□ 1.69
RAB40C-212ENST00000569575 HSPBP1Q9NZL4 362 aa25.58■■□□□ 1.69
RAB40C-212ENST00000569575 CTNND2Q9UQB3 1225 aa25.58■■□□□ 1.69
RAB40C-212ENST00000569575 TTC3P53804 2025 aa25.58■■□□□ 1.68
RAB40C-212ENST00000569575 MICAL3Q7RTP6 2002 aa25.58■■□□□ 1.68
RAB40C-212ENST00000569575 MGEA5O60502 916 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 NPTXRO95502 500 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 NR2F2P24468 414 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 KCNJ6P48051 423 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 YARSP54577 528 aaKnown RBP25.57■■□□□ 1.68
RAB40C-212ENST00000569575 ZNF365Q70YC5 407 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 C16orf59Q7L2K0 433 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 ECHDC2Q86YB7 292 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 NPAS4Q8IUM7 802 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 ACAP3Q96P50 834 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 GIT1Q9Y2X7 761 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 IPPQ9Y573 584 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 PCDHB7Q9Y5E2 793 aa25.57■■□□□ 1.68
RAB40C-212ENST00000569575 ZNF233A6NK53 670 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 SMTNL1A8MU46 457 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 IKBKBO14920 756 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 SLC16A3O15427 465 aaKnown RBP25.56■■□□□ 1.68
RAB40C-212ENST00000569575 EXOC3O60645 756 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 BMP8BP34820 402 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 ANO6Q4KMQ2 910 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 SPATA1Q5VX52 437 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 FILIP1Q7Z7B0 1213 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 ZBTB33Q86T24 672 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 ZNF598Q86UK7 904 aaKnown RBP25.56■■□□□ 1.68
RAB40C-212ENST00000569575 CSGALNACT2Q8N6G5 542 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 CBWD1Q9BRT8 395 aa25.56■■□□□ 1.68
RAB40C-212ENST00000569575 EIF2AQ9BY44 585 aaKnown RBP25.56■■□□□ 1.68
RAB40C-212ENST00000569575 CPSF3Q9UKF6 684 aaKnown RBP25.56■■□□□ 1.68
RAB40C-212ENST00000569575 CLIC2O15247 247 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 FAM189A1O60320 539 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 ADRB2P07550 413 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 ACRP10323 421 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 ITGA4P13612 1032 aa25.55■■□□□ 1.68
RAB40C-212ENST00000569575 PSMC2P35998 433 aaKnown RBP25.55■■□□□ 1.68
RAB40C-212ENST00000569575 MAGEA10P43363 369 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-212ENST00000569575 ZNF165P49910 485 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms