RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 APBB1IPQ7Z5R6 666 aaPredicted RBP17.05■□□□□ 0.32
SNX6-205ENST00000555648 C12orf76Q8N812 135 aaPredicted RBP17.05■□□□□ 0.32
SNX6-205ENST00000555648 KLHL5Q96PQ7 755 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 BHMT2Q9H2M3 363 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 KLK14Q9P0G3 267 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 DPP7Q9UHL4 492 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 KIAA1024Q9UPX6 916 aa17.05■□□□□ 0.32
SNX6-205ENST00000555648 ATG2AQ2TAZ0 1938 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 INPPL1O15357 1258 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 PRKCBP05771 671 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 ADH1AP07327 375 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 GLUD2P49448 558 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 GRIK3Q13003 919 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 FAM187BQ17R55 369 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 CDCA2Q69YH5 1023 aaPredicted RBP17.04■□□□□ 0.32
SNX6-205ENST00000555648 DTHD1Q6ZMT9 781 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 TRIM67Q6ZTA4 783 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 HFE2Q6ZVN8 426 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 KIFAP3Q92845 792 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 PBXIP1Q96AQ6 731 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 FBXL18Q96ME1 805 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 HERC2P3Q9BVR0 1158 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 VN1R3Q9BXE9 311 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 FZD8Q9H461 694 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 SFXN1Q9H9B4 322 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 DDX19AQ9NUU7 478 aaKnown RBP17.04■□□□□ 0.32
SNX6-205ENST00000555648 DNM3Q9UQ16 869 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 MUC3AQ02505 3323 aa17.04■□□□□ 0.32
SNX6-205ENST00000555648 TMEM221A6NGB7 291 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 M0R296 226 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 TADA2AO75478 443 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 CNPP09543 421 aaKnown RBP17.03■□□□□ 0.32
SNX6-205ENST00000555648 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 MCM2P49736 904 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 EFNA5P52803 228 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 DSC1Q08554 894 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 TMC5Q6UXY8 1006 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 SUGP1Q8IWZ8 645 aaKnown RBP17.03■□□□□ 0.32
SNX6-205ENST00000555648 TDRD5Q8NAT2 981 aaKnown RBP17.03■□□□□ 0.32
SNX6-205ENST00000555648 SLC22A17Q8WUG5 538 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 POMKQ9H5K3 350 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 MIOSQ9NXC5 875 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 DAXXQ9UER7 740 aaPredicted RBP17.03■□□□□ 0.32
SNX6-205ENST00000555648 PCDHB6Q9Y5E3 794 aa17.03■□□□□ 0.32
SNX6-205ENST00000555648 ACKR2O00590 384 aa17.02■□□□□ 0.32
SNX6-205ENST00000555648 ZRSR1Q15695 479 aaKnown RBP17.02■□□□□ 0.32
SNX6-205ENST00000555648 PTPN21Q16825 1174 aa17.02■□□□□ 0.32
SNX6-205ENST00000555648 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.32
SNX6-205ENST00000555648 C4orf32Q8N8J7 132 aa17.02■□□□□ 0.32
SNX6-205ENST00000555648 BSNDQ8WZ55 320 aa17.02■□□□□ 0.32
SNX6-205ENST00000555648 MARCH5Q9NX47 278 aa17.02■□□□□ 0.32
SNX6-205ENST00000555648 CDH22Q9UJ99 828 aa17.02■□□□□ 0.32
SNX6-205ENST00000555648 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.31
SNX6-205ENST00000555648 CCDC169A6NNP5 214 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 GLUD1P00367 558 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 PRPHP41219 470 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 TOB1P50616 345 aaPredicted RBP17.01■□□□□ 0.31
SNX6-205ENST00000555648 CLCN4P51793 760 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 SIGLEC14Q08ET2 396 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 DCAF4L1Q3SXM0 396 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 FUT10Q6P4F1 479 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 PLCD3Q8N3E9 789 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 ACSF2Q96CM8 615 aaPredicted RBP17.01■□□□□ 0.31
SNX6-205ENST00000555648 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 KCNH6Q9H252 994 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 PDZD7Q9H5P4 517 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNX6-205ENST00000555648 SNTG2Q9NY99 539 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 ADAM28Q9UKQ2 775 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 SMC3Q9UQE7 1217 aa17.01■□□□□ 0.31
SNX6-205ENST00000555648 C2CD4DB7Z1M9 353 aa17■□□□□ 0.31
SNX6-205ENST00000555648 K7ERI5 159 aa17■□□□□ 0.31
SNX6-205ENST00000555648 LILRB3O75022 631 aa17■□□□□ 0.31
SNX6-205ENST00000555648 THP07101 528 aa17■□□□□ 0.31
SNX6-205ENST00000555648 GJB2P29033 226 aa17■□□□□ 0.31
SNX6-205ENST00000555648 DSG1Q02413 1049 aa17■□□□□ 0.31
SNX6-205ENST00000555648 CREMQ03060 361 aa17■□□□□ 0.31
SNX6-205ENST00000555648 DMP1Q13316 513 aaPredicted RBP17■□□□□ 0.31
SNX6-205ENST00000555648 TUSC3Q13454 348 aa17■□□□□ 0.31
SNX6-205ENST00000555648 MTMR3Q13615 1198 aa17■□□□□ 0.31
SNX6-205ENST00000555648 ECM1Q16610 540 aa17■□□□□ 0.31
SNX6-205ENST00000555648 USP41Q3LFD5 358 aa17■□□□□ 0.31
SNX6-205ENST00000555648 ATF7IP2Q5U623 682 aa17■□□□□ 0.31
SNX6-205ENST00000555648 KANK3Q6NY19 840 aa17■□□□□ 0.31
SNX6-205ENST00000555648 CCDC149Q6ZUS6 474 aa17■□□□□ 0.31
SNX6-205ENST00000555648 TAS1R1Q7RTX1 841 aa17■□□□□ 0.31
SNX6-205ENST00000555648 BMP8AQ7Z5Y6 402 aa17■□□□□ 0.31
SNX6-205ENST00000555648 IGSF22Q8N9C0 903 aa17■□□□□ 0.31
SNX6-205ENST00000555648 CDK5RAP3Q96JB5 506 aa17■□□□□ 0.31
SNX6-205ENST00000555648 DRC1Q96MC2 740 aa17■□□□□ 0.31
SNX6-205ENST00000555648 KIFC3Q9BVG8 833 aa17■□□□□ 0.31
SNX6-205ENST00000555648 POLD4Q9HCU8 107 aa17■□□□□ 0.31
SNX6-205ENST00000555648 MAN1C1Q9NR34 630 aa17■□□□□ 0.31
SNX6-205ENST00000555648 ZSCAN21Q9Y5A6 473 aaPredicted RBP17■□□□□ 0.31
SNX6-205ENST00000555648 SF3B1O75533 1304 aaKnown RBP eCLIP16.99■□□□□ 0.316e-13■■■■■ 155.1
SNX6-205ENST00000555648 PHLPP2Q6ZVD8 1323 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 TEX28O15482 410 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 RECQL4O94761 1208 aa16.99■□□□□ 0.31
SNX6-205ENST00000555648 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
SNX6-205ENST00000555648 OTOP3Q7RTS5 596 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms