RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 USO1O60763 962 aaKnown RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PALMO75781 387 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 RASSF9O75901 435 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 BMP15O95972 392 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ESRRAP11474 423 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 SLC5A1P13866 664 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ARNTP27540 789 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 LONP1P36776 959 aaKnown RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 FLT3P36888 993 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 MDH1P40925 334 aaKnown RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PAFAH1B1P43034 410 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 MAGEA1P43355 309 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ASIC1P78348 528 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 TRIM28Q13263 835 aaKnown RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CBX2Q14781 532 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 TXNRD1Q16881 649 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 C21orf62-AS1Q17RA5 79 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC40Q4G0X9 1142 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 KDM7AQ6ZMT4 941 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 FMNL3Q8IVF7 1028 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 TAB3Q8N5C8 712 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 KIAA0895Q8NCT3 520 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF384Q8TF68 577 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 JDP2Q8WYK2 163 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 N4BP2L2Q92802 583 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CYFIP2Q96F07 1278 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 SCLT1Q96NL6 688 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PACSIN1Q9BY11 444 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 TSGA10Q9BZW7 698 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CPVLQ9H3G5 476 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 RNF41Q9H4P4 317 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 GDF3Q9NR23 364 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 DONSONQ9NYP3 566 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 CNOT8Q9UFF9 292 aaKnown RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 DDX20Q9UHI6 824 aaKnown RBP2.8□□□□□ -1.96
PRPF39-207ENST00000554439 MCM8Q9UJA3 840 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 NAGPAQ9UK23 515 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PLAGL2Q9UPG8 496 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 SIK3Q9Y2K2 1263 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 UBR2Q8IWV8 1755 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 RTL9Q8NET4 1388 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 PNPLA7Q6ZV29 1317 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 MYH1P12882 1939 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 MYH4Q9Y623 1939 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 COL4A1P02462 1669 aa2.8□□□□□ -1.96
PRPF39-207ENST00000554439 ERVV-2B6SEH9 535 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PDE8AO60658 829 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SKAP2O75563 359 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 FAM107AO95990 144 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RPSAP08865 295 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TCP1P17987 556 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GNAT2P19087 354 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PAX7P23759 505 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CCNE1P24864 410 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PDE6BP35913 854 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 STAT3P40763 770 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 USP8P40818 1118 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 UBA7P41226 1012 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 GYG1P46976 350 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SETQ01105 290 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 DDR1Q08345 913 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 HLTFQ14527 1009 aaKnown RBP eCLIP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 KCNB1Q14721 858 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 LRRC41Q15345 812 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 UAP1Q16222 522 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PFKFB3Q16875 520 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SLC35G1Q2M3R5 365 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 VWA3BQ502W6 1294 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TDRD12Q587J7 1177 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ODR4Q5SWX8 454 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 FAM182BQ5T319 152 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SCARA3Q6AZY7 606 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 C6orf89Q6UWU4 347 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RIPOR1Q6ZS17 1223 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 DYMQ7RTS9 669 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 IQCA1Q86XH1 822 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 IFT20Q8IY31 132 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 BLIDQ8IZY5 108 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 SYNPOQ8N3V7 929 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 KLHL6Q8WZ60 621 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PIGBQ92521 554 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ATP6V1G3Q96LB4 118 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC114Q96M63 670 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ALS2CR12Q96Q35 445 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 UIMC1Q96RL1 719 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ERGIC2Q96RQ1 377 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RIOK1Q9BRS2 568 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NUP58Q9BVL2 599 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 AP1M1Q9BXS5 423 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 TRIM9Q9C026 710 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NRSN2Q9GZP1 204 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ADAM19Q9H013 955 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NEUROG2Q9H2A3 272 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 NDST4Q9H3R1 872 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 RBM28Q9NW13 759 aaKnown RBP2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PCDHA6Q9UN73 950 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 JAG2Q9Y219 1238 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ZBTB1Q9Y2K1 713 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 ATP8A1Q9Y2Q0 1164 aa2.79□□□□□ -1.96
PRPF39-207ENST00000554439 PCDHA8Q9Y5H6 950 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms