RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 SLC27A1Q6PCB7 646 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 PIK3AP1Q6ZUJ8 805 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 RTL10Q7L3V2 364 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 CCDC105Q8IYK2 499 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 ZNF707Q96C28 371 aaPredicted RBP10.45□□□□□ -0.74
SDC2-207ENST00000522911 DYDC2Q96IM9 177 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 EIF2AK1Q9BQI3 630 aaKnown RBP10.45□□□□□ -0.74
SDC2-207ENST00000522911 COLEC11Q9BWP8 271 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 EIF2AQ9BY44 585 aaKnown RBP10.45□□□□□ -0.74
SDC2-207ENST00000522911 SLKQ9H2G2 1235 aaPredicted RBP10.45□□□□□ -0.74
SDC2-207ENST00000522911 SEMA4AQ9H3S1 761 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 MFSD1Q9H3U5 465 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 SMOC2Q9H3U7 446 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 MAN1C1Q9NR34 630 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 FAM86C1Q9NVL1 165 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 PCDHA12Q9UN75 941 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 DNAH14Q0VDD8 3507 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 SPTBN4Q9H254 2564 aa10.45□□□□□ -0.74
SDC2-207ENST00000522911 CCDC195A0A1B0GUA6 201 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 CTDNEP1O95476 244 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 POMCP01189 267 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 ARF4P18085 180 aaPredicted RBP10.44□□□□□ -0.74
SDC2-207ENST00000522911 HOXA9P31269 272 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 MLH1P40692 756 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 RARRES1P49788 294 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 AK2P54819 239 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 STK3Q13188 491 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 CAPSQ13938 189 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 EARS2Q5JPH6 523 aaKnown RBP10.44□□□□□ -0.74
SDC2-207ENST00000522911 CDCA2Q69YH5 1023 aaPredicted RBP10.44□□□□□ -0.74
SDC2-207ENST00000522911 PHLDB3Q6NSJ2 640 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 ASCL5Q7RTU5 278 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 MTMR9Q96QG7 549 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 GAD1Q99259 594 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 BRMS1Q9HCU9 246 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 MIOSQ9NXC5 875 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 ADAM28Q9UKQ2 775 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 TPCN1Q9ULQ1 816 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 ARID2Q68CP9 1835 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 DMXL1Q9Y485 3027 aa10.44□□□□□ -0.74
SDC2-207ENST00000522911 ANHXE9PGG2 379 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 INO80B-WBP1J3KQ70 363 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 ZBTB39O15060 712 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 SRFP11831 508 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 FDPSP14324 419 aaKnown RBP10.43□□□□□ -0.74
SDC2-207ENST00000522911 MUTP22033 750 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 GLRA2P23416 452 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 KRT2P35908 639 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 OR1G1P47890 313 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 SCNN1GP51170 649 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 CYP4A11Q02928 519 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 ORC2Q13416 577 aaPredicted RBP10.43□□□□□ -0.74
SDC2-207ENST00000522911 CTTNQ14247 550 aaKnown RBP10.43□□□□□ -0.74
SDC2-207ENST00000522911 NCAPH2Q6IBW4 605 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 FUT10Q6P4F1 479 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 TAS1R1Q7RTX1 841 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 TPH2Q8IWU9 490 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 DTWD2Q8NBA8 298 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 MCPH1Q8NEM0 835 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 FEZF2Q8TBJ5 459 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 NKD2Q969F2 451 aaPredicted RBP10.43□□□□□ -0.74
SDC2-207ENST00000522911 BORCS6Q96GS4 357 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 ZFP42Q96MM3 310 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 PRKD2Q9BZL6 878 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 NT5C3AQ9H0P0 336 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 FZD8Q9H461 694 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 TTC12Q9H892 705 aaPredicted RBP10.43□□□□□ -0.74
SDC2-207ENST00000522911 SLC2A4RGQ9NR83 387 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 PRMT7Q9NVM4 692 aaPredicted RBP10.43□□□□□ -0.74
SDC2-207ENST00000522911 ORC3Q9UBD5 711 aaPredicted RBP10.43□□□□□ -0.74
SDC2-207ENST00000522911 PRG3Q9Y2Y8 225 aaPredicted RBP10.43□□□□□ -0.74
SDC2-207ENST00000522911 CACNA1AO00555 2505 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 C2orf16Q68DN1 1984 aa10.43□□□□□ -0.74
SDC2-207ENST00000522911 SF3B1O75533 1304 aaKnown RBP eCLIP10.42□□□□□ -0.74
SDC2-207ENST00000522911 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 TGM5O43548 720 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 MARCH6O60337 910 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 NEMFO60524 1076 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 HNRNPA1P09651 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
SDC2-207ENST00000522911 LAMP2P13473 410 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 NR5A1Q13285 461 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 CALCRLQ16602 461 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 PDXDC1Q6P996 788 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 SLC44A3Q8N4M1 653 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 ASAP3Q8TDY4 903 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 PIK3R5Q8WYR1 880 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 SMG7Q92540 1137 aaKnown RBP10.42□□□□□ -0.74
SDC2-207ENST00000522911 GTF3C6Q969F1 213 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 CPB2Q96IY4 423 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 GPR62Q9BZJ7 368 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 TRIM6Q9C030 488 aaPredicted RBP10.42□□□□□ -0.74
SDC2-207ENST00000522911 NXF3Q9H4D5 531 aaKnown RBP10.42□□□□□ -0.74
SDC2-207ENST00000522911 TUFT1Q9NNX1 390 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 GJB4Q9NTQ9 266 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 HES2Q9Y543 173 aa10.42□□□□□ -0.74
SDC2-207ENST00000522911 KRBA1A5PL33 1030 aa10.41□□□□□ -0.74
SDC2-207ENST00000522911 TMEM189-UBE2V1I3L0A0 370 aa10.41□□□□□ -0.74
SDC2-207ENST00000522911 C2CD2LO14523 706 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms