RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 FAM189A1O60320 539 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 PROZP22891 400 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 EIF4BP23588 611 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 HOXA11P31270 313 aaPredicted RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 MGAT3Q09327 533 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 ARID5BQ14865 1188 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 PKN2Q16513 984 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 FAM187BQ17R55 369 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 VWA3BQ502W6 1294 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 SRGAP1Q7Z6B7 1085 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 POP1Q99575 1024 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 AGO2Q9UKV8 859 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 FRMD4BQ9Y2L6 1034 aa16.41■□□□□ 0.22
SREK1-209ENST00000520953 NOC2LQ9Y3T9 749 aaKnown RBP16.41■□□□□ 0.22
SREK1-209ENST00000520953 CLDN3O15551 220 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 TOM1L1O75674 476 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 GARTP22102 1010 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 CDK7P50613 346 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 OSTNP61366 133 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 UBXN1Q04323 297 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 GOLGA8FQ08AF8 430 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 GOLGA8DPQ0D2H9 430 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 MAN2A1Q16706 1144 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 C1orf220Q5T0J3 134 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 CATSPER4Q7RTX7 472 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 TMC6Q7Z403 805 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 FRMD5Q7Z6J6 570 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 ANKRD20A12PQ8NF67 263 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 TMEM174Q8WUU8 243 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 SLC35C1Q96A29 364 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 MCOLN1Q9GZU1 580 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 CDT1Q9H211 546 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 NDST4Q9H3R1 872 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 TOPORSQ9NS56 1045 aaPredicted RBP16.4■□□□□ 0.22
SREK1-209ENST00000520953 CGNQ9P2M7 1197 aaKnown RBP16.4■□□□□ 0.22
SREK1-209ENST00000520953 GNA14O95837 355 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 PBX1P40424 430 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 CRYBB1P53674 252 aaPredicted RBP16.4■□□□□ 0.22
SREK1-209ENST00000520953 TERF1P54274 439 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 SNRPFP62306 86 aaKnown RBP16.4■□□□□ 0.22
SREK1-209ENST00000520953 APBA1Q02410 837 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 ZNF568Q3ZCX4 644 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 ZNF618Q5T7W0 954 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 TCERG1LQ5VWI1 586 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 FAM228AQ86W67 206 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 LRRC8AQ8IWT6 810 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 GPD1LQ8N335 351 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 NME8Q8N427 588 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 CCDC127Q96BQ5 260 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 FBXL18Q96ME1 805 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.4■□□□□ 0.22
SREK1-209ENST00000520953 TRPV2Q9Y5S1 764 aa16.4■□□□□ 0.22
SREK1-209ENST00000520953 MEFVO15553 781 aaPredicted RBP16.39■□□□□ 0.21
SREK1-209ENST00000520953 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
SREK1-209ENST00000520953 ERLIN2O94905 339 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 ABCD1P33897 745 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 PTPN11Q06124 597 aaPredicted RBP16.39■□□□□ 0.21
SREK1-209ENST00000520953 PTK7Q13308 1070 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 MYBPC2Q14324 1141 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 DNTTIP2Q5QJE6 756 aaKnown RBP16.39■□□□□ 0.21
SREK1-209ENST00000520953 MPZL3Q6UWV2 235 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 VSTM4Q8IW00 320 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 THNSL1Q8IYQ7 743 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 TMEM130Q8N3G9 435 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 AGO3Q9H9G7 860 aaKnown RBP16.39■□□□□ 0.21
SREK1-209ENST00000520953 TNFSF13BQ9Y275 285 aa16.39■□□□□ 0.21
SREK1-209ENST00000520953 CBFA2T2O43439 604 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 EXTL3O43909 919 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 SCP2P22307 547 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 GJA8P48165 433 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 MCL1Q07820 350 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 KCNH2Q12809 1159 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 LMBRD2Q68DH5 695 aaPredicted RBP16.38■□□□□ 0.21
SREK1-209ENST00000520953 TRAF7Q6Q0C0 670 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 MKNK1Q9BUB5 465 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 EIF2AQ9BY44 585 aaKnown RBP16.38■□□□□ 0.21
SREK1-209ENST00000520953 PTPRJQ12913 1337 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 LRRN2O75325 713 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 PPP3CAQ08209 521 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 BFSP1Q12934 665 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 FILIP1LQ4L180 1135 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 CBWD6Q4V339 395 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 CBWD3Q5JTY5 395 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 CBWD5Q5RIA9 395 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 SCARA3Q6AZY7 606 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 CXCL16Q9H2A7 254 aa16.38■□□□□ 0.21
SREK1-209ENST00000520953 A0A1B0GUA9 196 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 GHRP10912 638 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 CKBP12277 381 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 CYP24A1Q07973 514 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 SYCP1Q15431 976 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 SLFN12LQ6IEE8 588 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 RPAINQ86UA6 219 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
SREK1-209ENST00000520953 PRIMPOLQ96LW4 560 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms