RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PER3P56645 1201 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 TARDBPQ13148 414 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 PLS1Q14651 629 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 RTP5Q14D33 572 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 MST1LQ2TV78 715 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 TMEM95Q3KNT9 176 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 TAS1R1Q7RTX1 841 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 RSPH3Q86UC2 560 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 ZSWIM9Q86XI8 627 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 ANKRD42Q8N9B4 389 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 KYQ8NBH2 561 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 PIK3C3Q8NEB9 887 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 MYRIPQ8NFW9 859 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 POF1BQ8WVV4 589 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 ANKS1AQ92625 1134 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 CYFIP2Q96F07 1278 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 MRGPRX4Q96LA9 322 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 SAMD11Q96NU1 681 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 UBA5Q9GZZ9 404 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 PNPOQ9NVS9 261 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 CALCOCO1Q9P1Z2 691 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 STAP2Q9UGK3 403 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 SIK3Q9Y2K2 1263 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 PCDHA5Q9Y5H7 936 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 SNX13Q9Y5W8 968 aa6.51□□□□□ -1.37
HMGB1P3-201ENST00000502802 A0A1W2PPL8 197 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 FOXN3O00409 490 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 KPNA5O15131 536 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 KNG1P01042 644 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 FGAP02671 866 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 SYN1P17600 705 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 RAB39AQ14964 217 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 DGKKQ5KSL6 1271 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 FAM9AQ8IZU1 332 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 TTLL6Q8N841 843 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 IL31RAQ8NI17 732 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 CCHCR1Q8TD31 782 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 RAB24Q969Q5 203 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 UIMC1Q96RL1 719 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 VRK1Q99986 396 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 C14orf93Q9H972 538 aaKnown RBP6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 BCO1Q9HAY6 547 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 KIAA1586Q9HCI6 787 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 ARFGAP3Q9NP61 516 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 ABCF2Q9UG63 623 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 CDC42EP3Q9UKI2 254 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 CORO2BQ9UQ03 480 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 VWA7Q9Y334 891 aa6.5□□□□□ -1.37
HMGB1P3-201ENST00000502802 TBX3O15119 743 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 SH3BP5O60239 455 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 NBNO60934 754 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 PPFIA4O75335 1185 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 TYRP1P17643 537 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 TNFSF4P23510 183 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 SREBF1P36956 1147 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 STAT5BP51692 787 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 CDR1P51861 262 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 SESN2P58004 480 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 EIF4HQ15056 248 aaKnown RBP6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 PQLC1Q8N2U9 271 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 SH2D3CQ8N5H7 860 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 MSL3Q8N5Y2 521 aaKnown RBP6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 LINC00482Q8N8I6 264 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 ZNF480Q8WV37 535 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 TMX3Q96JJ7 454 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 UHRF1Q96T88 793 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 WDR12Q9GZL7 423 aaKnown RBP6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 CNTD2Q9H8S5 307 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 LRCH1Q9Y2L9 728 aa6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 MYBBP1AQ9BQG0 1328 aaKnown RBP6.49□□□□□ -1.37
HMGB1P3-201ENST00000502802 ISM1B1AKI9 464 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 BIN1O00499 593 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 NPHP1O15259 732 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 PEX10O60683 326 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 COL6A1P12109 1028 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 MALP21145 153 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 IGFBP6P24592 240 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 POLD1P28340 1107 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 KCNQ1P51787 676 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 GP2P55259 537 aaKnown RBP6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 FOXO4P98177 505 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 TLE1Q04724 770 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 SNAPC2Q13487 334 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 FAM209BQ5JX69 171 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 GADL1Q6ZQY3 521 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 CBLL1Q75N03 491 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 OR7D4Q8NG98 312 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 IFI44Q8TCB0 444 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 GFM2Q969S9 779 aaKnown RBP6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 PDCD2LQ9BRP1 358 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 CRB3Q9BUF7 120 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 VPS11Q9H270 941 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 CERS4Q9HA82 394 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 ZNF287Q9HBT7 754 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 STARD7Q9NQZ5 370 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 TLR9Q9NR96 1032 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 GPRC5BQ9NZH0 403 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 TRPS1Q9UHF7 1281 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 FEZ2Q9UHY8 353 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms