RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PQLC1Q8N2U9 271 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 LILRA3Q8N6C8 439 aaPredicted RBP6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 ADAMTS17Q8TE56 1095 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 RPS6KC1Q96S38 1066 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 DMRTA2Q96SC8 542 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 PPP1R16BQ96T49 567 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 UHRF1Q96T88 793 aaPredicted RBP6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 PDCD2LQ9BRP1 358 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 B3GNT5Q9BYG0 378 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 LDAHQ9H6V9 325 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 MANSC1Q9H8J5 431 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 BCO1Q9HAY6 547 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 CD320Q9NPF0 282 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 GPRC5DQ9NZD1 345 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 TRPS1Q9UHF7 1281 aa6.28□□□□□ -1.4
PRPF38A-203ENST00000487160 FAM227AF5H4B4 570 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 ADCY6O43306 1168 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 TOX4O94842 621 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 PHKG2P15735 406 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 SREBF1P36956 1147 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 AFF3P51826 1226 aaKnown RBP6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 NEK3P51956 506 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 AGFG1P52594 562 aaKnown RBP6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 WNT3AP56704 352 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 TARDBPQ13148 414 aaKnown RBP eCLIP6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 PICALMQ13492 652 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 KIAA0753Q2KHM9 967 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 ANO6Q4KMQ2 910 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 ZMAT1Q5H9K5 638 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 FAM26FQ5R3K3 315 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 THEMIS2Q5TEJ8 643 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 OR7D4Q8NG98 312 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 OR14K1Q8NGZ2 314 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 KLHDC4Q8TBB5 520 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 LPPQ93052 612 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 SLC7A6OSQ96CW6 309 aaPredicted RBP6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 MRGPRX4Q96LA9 322 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 MPHOSPH6Q99547 160 aaKnown RBP6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 SLC38A3Q99624 504 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 VRK1Q99986 396 aaPredicted RBP6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 CHMP4AQ9BY43 222 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 ZNF700Q9H0M5 742 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 L1RE1Q9UN81 338 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 STXBP5LQ9Y2K9 1186 aa6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 THOC2Q8NI27 1593 aaKnown RBP6.27□□□□□ -1.41
PRPF38A-203ENST00000487160 ANO9A1A5B4 782 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 C9orf118A6NHY6 69 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 SLC16A6O15403 523 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 ITGA10O75578 1167 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 AMY1AP04745 511 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 ADCY7P51828 1080 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 HK3P52790 923 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 LINC00310P59036 64 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 BPIFB4P59827 614 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 BRD3Q15059 726 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 KCNA10Q16322 511 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 KHDC1Q4VXA5 237 aaKnown RBP6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 ZNF648Q5T619 568 aaPredicted RBP6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 RSPH3Q86UC2 560 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 COL23A1Q86Y22 540 aaPredicted RBP6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 ZGPATQ8N5A5 531 aaKnown RBP6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 TP53I13Q8NBR0 393 aaPredicted RBP6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 C3orf20Q8ND61 904 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 REPS2Q8NFH8 660 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 FBXO18Q8NFZ0 1043 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 PLBD2Q8NHP8 589 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 FBXO41Q8TF61 875 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 STON2Q8WXE9 905 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 MBD6Q96DN6 1003 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 CDK5RAP3Q96JB5 506 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 TMX3Q96JJ7 454 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 LCORQ96JN0 433 aaPredicted RBP6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 RPL10LQ96L21 214 aaKnown RBP6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 SLC6A15Q9H2J7 730 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 PCDHA3Q9Y5H8 950 aa6.26□□□□□ -1.41
PRPF38A-203ENST00000487160 MYBBP1AQ9BQG0 1328 aaKnown RBP6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 NPIPB6E9PJ23 425 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 PMM2O15305 246 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 TPD52L2O43399 206 aaKnown RBP6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 GASTP01350 101 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 VSIG10L2P0DP72 767 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 CRHR1P34998 444 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 HGFACQ04756 655 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 DUSP2Q05923 314 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 NOGQ13253 232 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 RNF220Q5VTB9 566 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 KRT40Q6A162 431 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 RALYLQ86SE5 291 aaKnown RBP6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 DAAM2Q86T65 1068 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 ZNF761Q86XN6 746 aaPredicted RBP6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 ANKRD53Q8N9V6 530 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 IFI44Q8TCB0 444 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 CYFIP2Q96F07 1278 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 SENP6Q9GZR1 1112 aaPredicted RBP6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 BHMT2Q9H2M3 363 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 ARMT1Q9H993 441 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 POLHQ9Y253 713 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 PCDHGB6Q9Y5F9 930 aa6.25□□□□□ -1.41
PRPF38A-203ENST00000487160 A0A088AWK7 358 aa6.24□□□□□ -1.41
PRPF38A-203ENST00000487160 CAPN8A6NHC0 703 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms