RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 AEBP2Q6ZN18 517 aaPredicted RBP21.82■■□□□ 1.08
PRPF38A-203ENST00000487160 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
PRPF38A-203ENST00000487160 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
PRPF38A-203ENST00000487160 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
PRPF38A-203ENST00000487160 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
PRPF38A-203ENST00000487160 FOXD1Q16676 465 aa17.05■□□□□ 0.32
PRPF38A-203ENST00000487160 ADRA2BP18089 450 aa16.8■□□□□ 0.28
PRPF38A-203ENST00000487160 PPP6R1Q9UPN7 881 aa16.79■□□□□ 0.28
PRPF38A-203ENST00000487160 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
PRPF38A-203ENST00000487160 KCNA4P22459 653 aa15.97■□□□□ 0.15
PRPF38A-203ENST00000487160 PPP4R3CPQ6ZMV5 832 aa15.8■□□□□ 0.12
PRPF38A-203ENST00000487160 MSH5O43196 834 aa15.5■□□□□ 0.07
PRPF38A-203ENST00000487160 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
PRPF38A-203ENST00000487160 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
PRPF38A-203ENST00000487160 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
PRPF38A-203ENST00000487160 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
PRPF38A-203ENST00000487160 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
PRPF38A-203ENST00000487160 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
PRPF38A-203ENST00000487160 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
PRPF38A-203ENST00000487160 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
PRPF38A-203ENST00000487160 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
PRPF38A-203ENST00000487160 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
PRPF38A-203ENST00000487160 ZBTB22O15209 634 aa14.71□□□□□ -0.05
PRPF38A-203ENST00000487160 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
PRPF38A-203ENST00000487160 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
PRPF38A-203ENST00000487160 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
PRPF38A-203ENST00000487160 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
PRPF38A-203ENST00000487160 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
PRPF38A-203ENST00000487160 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
PRPF38A-203ENST00000487160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.173e-11■■■□□ 18.3
PRPF38A-203ENST00000487160 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.17
PRPF38A-203ENST00000487160 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
PRPF38A-203ENST00000487160 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
PRPF38A-203ENST00000487160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
PRPF38A-203ENST00000487160 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
PRPF38A-203ENST00000487160 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
PRPF38A-203ENST00000487160 FKBP8Q14318 412 aa13.52□□□□□ -0.25
PRPF38A-203ENST00000487160 APLP2Q06481 763 aa13.46□□□□□ -0.25
PRPF38A-203ENST00000487160 ZNF219Q9P2Y4 722 aaPredicted RBP13.43□□□□□ -0.26
PRPF38A-203ENST00000487160 POTEDQ86YR6 584 aa13.35□□□□□ -0.27
PRPF38A-203ENST00000487160 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
PRPF38A-203ENST00000487160 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
PRPF38A-203ENST00000487160 TRHP20396 242 aaPredicted RBP13.26□□□□□ -0.29
PRPF38A-203ENST00000487160 CAPN15O75808 1086 aa13.2□□□□□ -0.3
PRPF38A-203ENST00000487160 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
PRPF38A-203ENST00000487160 POLA2Q14181 598 aa13.15□□□□□ -0.3
PRPF38A-203ENST00000487160 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
PRPF38A-203ENST00000487160 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
PRPF38A-203ENST00000487160 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
PRPF38A-203ENST00000487160 FBLN2P98095 1184 aa13.07□□□□□ -0.32
PRPF38A-203ENST00000487160 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
PRPF38A-203ENST00000487160 ABCB7O75027 752 aa13.01□□□□□ -0.33
PRPF38A-203ENST00000487160 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
PRPF38A-203ENST00000487160 PROM2Q8N271 834 aa12.88□□□□□ -0.35
PRPF38A-203ENST00000487160 DSG3P32926 999 aa12.87□□□□□ -0.35
PRPF38A-203ENST00000487160 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
PRPF38A-203ENST00000487160 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.37
PRPF38A-203ENST00000487160 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
PRPF38A-203ENST00000487160 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
PRPF38A-203ENST00000487160 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
PRPF38A-203ENST00000487160 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
PRPF38A-203ENST00000487160 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
PRPF38A-203ENST00000487160 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
PRPF38A-203ENST00000487160 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
PRPF38A-203ENST00000487160 SSUH2Q9Y2M2 353 aa12.58□□□□□ -0.4
PRPF38A-203ENST00000487160 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
PRPF38A-203ENST00000487160 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
PRPF38A-203ENST00000487160 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
PRPF38A-203ENST00000487160 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
PRPF38A-203ENST00000487160 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
PRPF38A-203ENST00000487160 PKD2Q13563 968 aa12.35□□□□□ -0.43
PRPF38A-203ENST00000487160 MIER1Q8N108 512 aa12.34□□□□□ -0.43
PRPF38A-203ENST00000487160 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
PRPF38A-203ENST00000487160 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
PRPF38A-203ENST00000487160 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
PRPF38A-203ENST00000487160 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
PRPF38A-203ENST00000487160 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
PRPF38A-203ENST00000487160 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
PRPF38A-203ENST00000487160 ZBTB47Q9UFB7 747 aaPredicted RBP12.15□□□□□ -0.46
PRPF38A-203ENST00000487160 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
PRPF38A-203ENST00000487160 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
PRPF38A-203ENST00000487160 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-203ENST00000487160 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
PRPF38A-203ENST00000487160 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
PRPF38A-203ENST00000487160 RGL2O15211 777 aa12.06□□□□□ -0.48
PRPF38A-203ENST00000487160 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
PRPF38A-203ENST00000487160 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
PRPF38A-203ENST00000487160 CREBZFQ9NS37 354 aa12□□□□□ -0.49
PRPF38A-203ENST00000487160 NUBP1P53384 320 aa11.97□□□□□ -0.49
PRPF38A-203ENST00000487160 HAP1P54257 671 aaPredicted RBP11.96□□□□□ -0.49
PRPF38A-203ENST00000487160 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-203ENST00000487160 GSE1Q14687 1217 aa11.94□□□□□ -0.5
PRPF38A-203ENST00000487160 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
PRPF38A-203ENST00000487160 MNX1P50219 401 aaPredicted RBP11.93□□□□□ -0.5
PRPF38A-203ENST00000487160 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
PRPF38A-203ENST00000487160 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
PRPF38A-203ENST00000487160 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
PRPF38A-203ENST00000487160 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
PRPF38A-203ENST00000487160 PAXIP1Q6ZW49 1069 aaPredicted RBP11.86□□□□□ -0.51
PRPF38A-203ENST00000487160 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms