RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 MBNL2Q5VZF2 373 aaKnown RBP4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 UNC5BQ8IZJ1 945 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 PIK3C3Q8NEB9 887 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 PPP1R14CQ8TAE6 165 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 PROKR1Q8TCW9 393 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 MLST8Q9BVC4 326 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 ENKD1Q9H0I2 346 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 INTS7Q9NVH2 962 aaKnown RBP4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 TMEM260Q9NX78 707 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 PODXL2Q9NZ53 605 aa4.27□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZNF142P52746 1687 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 SHPRHQ149N8 1683 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 COL16A1Q07092 1604 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 PPFIA4O75335 1185 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 RECQL4O94761 1208 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 ABHD16AO95870 558 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 F2P00734 622 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 PROZP22891 400 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 CD69Q07108 199 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 LRRC32Q14392 662 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 PTPAQ15257 358 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 LRRC55Q6ZSA7 311 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 CXorf67Q86X51 503 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 KIF18BQ86Y91 864 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 VRK3Q8IV63 474 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 PASD1Q8IV76 773 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 NXPE1Q8N323 547 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 EFHBQ8N7U6 833 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 CDYL2Q8N8U2 506 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 OR5M3Q8NGP4 307 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 GPR150Q8NGU9 434 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 CPT1CQ8TCG5 803 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 CPPED1Q9BRF8 314 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 PDCD2LQ9BRP1 358 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 EPC1Q9H2F5 836 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 USP36Q9P275 1121 aaKnown RBP4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 PCDHB6Q9Y5E3 794 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 STRCP1A6NGW2 1772 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 FGD6Q6ZV73 1430 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 UNC13BO14795 1591 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 NRKQ7Z2Y5 1582 aa4.26□□□□□ -1.73
HMGB1P18-201ENST00000438801 GOLGB1Q14789 3259 aaKnown RBP4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 ST20-MTHFSA0A0A6YYL1 179 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZNF891A8MT65 544 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 TRIM24O15164 1050 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 KPNA6O60684 536 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 RHOBTB3O94955 611 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 SCAF4O95104 1147 aaKnown RBP4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 LY86O95711 162 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 CFBP00751 764 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 GYPEP15421 78 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 CASRP41180 1078 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 NEK4P51957 841 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 DSG1Q02413 1049 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 METTL24Q5JXM2 366 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 DPY19L2P1Q6NXN4 242 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 KCNV1Q6PIU1 500 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 ESPNLQ6ZVH7 1005 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 SYNPOQ8N3V7 929 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 CHTF18Q8WVB6 975 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZNF496Q96IT1 587 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 FAM193BQ96PV7 902 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZSWIM4Q9H7M6 989 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 THG1LQ9NWX6 298 aaKnown RBP4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 PACSIN3Q9UKS6 424 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 HS3ST4Q9Y661 456 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 DLC1Q96QB1 1528 aa4.25□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZCCHC11Q5TAX3 1644 aaKnown RBP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 PTPRGP23470 1445 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 TGM5O43548 720 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 DNAJC6O75061 913 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 PFKMP08237 780 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 ADRA1BP35368 520 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 FXR1P51114 621 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 WNT3AP56704 352 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 MRPL49Q13405 166 aaKnown RBP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 VPS72Q15906 364 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 TIGD2Q4W5G0 525 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 PLEKHG4Q58EX7 1191 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZBTB41Q5SVQ8 909 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 FAM83AQ86UY5 434 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 GLB1L3Q8NCI6 653 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 OR52N2Q8NGI0 321 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 SREK1Q8WXA9 508 aaKnown RBP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 FERMT2Q96AC1 680 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 LSM14BQ9BX40 385 aaKnown RBP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 CPEB1Q9BZB8 566 aaKnown RBP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 KCNH6Q9H252 994 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZNF768Q9H5H4 540 aaKnown RBP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 EIF2B4Q9UI10 523 aaKnown RBP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 MSRAQ9UJ68 235 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 USP18Q9UMW8 372 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 TRANK1O15050 2925 aa4.24□□□□□ -1.73
HMGB1P18-201ENST00000438801 MYOM1P52179 1685 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 ZFYVE16Q7Z3T8 1539 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 AHRRA9YTQ3 701 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 B3GALT2O43825 422 aa4.23□□□□□ -1.73
HMGB1P18-201ENST00000438801 SEC24DO94855 1032 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms