RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 L1RE1Q9UN81 338 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 PRKAB1Q9Y478 270 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 ZNF263O14978 683 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 KRT86O43790 486 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 LCA5LO95447 670 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 SCGB1D2O95969 90 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 ATP1A1P05023 1023 aaKnown RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 TUBBP07437 444 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 FAM157BP0CG42 384 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 ESRRAP11474 423 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 GCFC2P16383 781 aaKnown RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 STAT3P40763 770 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 MRPL12P52815 198 aaKnown RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 SEPT2Q15019 361 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 MAN2A1Q16706 1144 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 GNPTABQ3T906 1256 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 ZCWPW2Q504Y3 356 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 DCAF15Q66K64 600 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 NCAPH2Q6IBW4 605 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 NLRP8Q86W28 1048 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 NOA1Q8NC60 698 aaKnown RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 CDK5RAP3Q96JB5 506 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 UIMC1Q96RL1 719 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 LRRC3Q9BY71 257 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 DNAJC18Q9H819 358 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 TRPC5Q9UL62 973 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 C9IYK1 514 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 SOX1O00570 391 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 EPHB6O15197 1021 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 FGFR1OPO95684 399 aaKnown RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 NFIAQ12857 509 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 MTMR1Q13613 665 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 SV2CQ496J9 727 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 WDR93Q6P2C0 686 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 KLHL6Q8WZ60 621 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 JAKMIP2Q96AA8 810 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 PSTPIP2Q9H939 334 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 ZIM2Q9NZV7 527 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 HDAC6Q9UBN7 1215 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 SIPA1L1O43166 1804 aa8.02□□□□□ -1.12
CLCN3-202ENST00000360642 MYH7BA7E2Y1 1941 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 MYH4Q9Y623 1939 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 NPR1P16066 1061 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 OAS2P29728 719 aaKnown RBP8.02□□□□□ -1.13
CLCN3-202ENST00000360642 CYP2C19P33261 490 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 SOX18P35713 384 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 SLC16A2P36021 539 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 CCNFP41002 786 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 VSNL1P62760 191 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 KCTD1Q719H9 257 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 CCDC84Q86UT8 332 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-202ENST00000360642 ZFPM1Q8IX07 1006 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 TEKT1Q969V4 418 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 CCDC17Q96LX7 622 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 MBOAT7Q96N66 472 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 MRIQ9BWK5 157 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 ARHGAP20Q9P2F6 1191 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 PCDHA2Q9Y5H9 948 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 SAR1BQ9Y6B6 198 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 ARFGEF1Q9Y6D6 1849 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 CYP3A7-CYP3A51PA0A087WV96 503 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 ANO9A1A5B4 782 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 C2CD2LO14523 706 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 SLC26A4O43511 780 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 HLA-DOAP06340 250 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 PLEKP08567 350 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-202ENST00000360642 RHOXF2BP0C7M4 288 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 NME2P22392 152 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 CYP3A7P24462 503 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 ID4P47928 161 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 VAV2P52735 878 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 RPL6Q02878 288 aaKnown RBP8.02□□□□□ -1.13
CLCN3-202ENST00000360642 ZNF252P-AS1Q0IIN9 211 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 KIAA1328Q86T90 577 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 RNF180Q86T96 592 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 CRYGNQ8WXF5 182 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 GJA10Q969M2 543 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 ZDHHC15Q96MV8 337 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 NAP1L4Q99733 375 aaKnown RBP8.02□□□□□ -1.13
CLCN3-202ENST00000360642 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 RHOXF2Q9BQY4 288 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 KCNMB3Q9NPA1 279 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-202ENST00000360642 PCDHA12Q9UN75 941 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 DUSP10Q9Y6W6 482 aa8.02□□□□□ -1.13
CLCN3-202ENST00000360642 DDX3YO15523 660 aaKnown RBP8.01□□□□□ -1.13
CLCN3-202ENST00000360642 KPNA6O60684 536 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 ERLIN1O75477 346 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 USP11P51784 963 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 CYP27A1Q02318 531 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 COASYQ13057 564 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 IKBKEQ14164 716 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 MEX3CQ5U5Q3 659 aaKnown RBP8.01□□□□□ -1.13
CLCN3-202ENST00000360642 ARHGAP27Q6ZUM4 889 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 HDXQ7Z353 690 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 MMS19Q96T76 1030 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 GLT8D2Q9H1C3 349 aa8.01□□□□□ -1.13
CLCN3-202ENST00000360642 ZCCHC17Q9NP64 241 aaKnown RBP8.01□□□□□ -1.13
CLCN3-202ENST00000360642 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-202ENST00000360642 EPHX1P07099 455 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms