RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C ERV41Q04651 352 aa2.37□□□□□ -2.03
CUP9YPL177C DPP1Q05521 289 aa2.37□□□□□ -2.03
CUP9YPL177C YLR413WQ06689 675 aa2.37□□□□□ -2.03
CUP9YPL177C YPR063CQ12160 140 aa2.37□□□□□ -2.03
CUP9YPL177C TFS1P14306 219 aa2.36□□□□□ -2.03
CUP9YPL177C AEP1P32493 518 aa2.36□□□□□ -2.03
CUP9YPL177C YIA6P40556 373 aa2.36□□□□□ -2.03
CUP9YPL177C SYS1P41544 203 aa2.36□□□□□ -2.03
CUP9YPL177C KEL2P50090 882 aa2.36□□□□□ -2.03
CUP9YPL177C LIF1P53150 421 aa2.36□□□□□ -2.03
CUP9YPL177C YNL260CP53846 198 aa2.36□□□□□ -2.03
CUP9YPL177C YNL050CP53952 270 aa2.36□□□□□ -2.03
CUP9YPL177C MRS2Q01926 470 aa2.36□□□□□ -2.03
CUP9YPL177C OSH6Q02201 448 aa2.36□□□□□ -2.03
CUP9YPL177C BER1Q06688 274 aaKnown RBP2.36□□□□□ -2.03
CUP9YPL177C YAK1P14680 807 aa2.35□□□□□ -2.03
CUP9YPL177C GCG1P32656 232 aaKnown RBP2.35□□□□□ -2.03
CUP9YPL177C TKL2P33315 681 aa2.35□□□□□ -2.03
CUP9YPL177C MED8P38304 223 aa2.35□□□□□ -2.03
CUP9YPL177C YJL144WP47009 104 aa2.35□□□□□ -2.03
CUP9YPL177C YMR209CQ03648 457 aa2.35□□□□□ -2.03
CUP9YPL177C CSI1Q04368 295 aa2.35□□□□□ -2.03
CUP9YPL177C BCP1Q06338 283 aa2.35□□□□□ -2.03
CUP9YPL177C HRT1Q08273 121 aa2.35□□□□□ -2.03
CUP9YPL177C TDH1P00360 332 aaKnown RBP2.34□□□□□ -2.03
CUP9YPL177C PHO80P20052 293 aa2.34□□□□□ -2.03
CUP9YPL177C ATG15P25641 520 aa2.34□□□□□ -2.03
CUP9YPL177C DAL80P26343 269 aa2.34□□□□□ -2.03
CUP9YPL177C YHL044WP38727 235 aa2.34□□□□□ -2.03
CUP9YPL177C TDA11P38854 504 aa2.34□□□□□ -2.03
CUP9YPL177C SEN34P39707 275 aa2.34□□□□□ -2.03
CUP9YPL177C TPN1P53099 579 aa2.34□□□□□ -2.03
CUP9YPL177C ERV25P54837 211 aaKnown RBP2.34□□□□□ -2.03
CUP9YPL177C GPN3Q06543 272 aa2.34□□□□□ -2.03
CUP9YPL177C ILV1P00927 576 aaKnown RBP2.33□□□□□ -2.04
CUP9YPL177C FRS2P15625 503 aaKnown RBP2.33□□□□□ -2.04
CUP9YPL177C YKL070WP36087 169 aa2.33□□□□□ -2.04
CUP9YPL177C AVT6P40074 448 aa2.33□□□□□ -2.04
CUP9YPL177C MND1P53102 219 aa2.33□□□□□ -2.04
CUP9YPL177C YML018CQ03730 393 aa2.33□□□□□ -2.04
CUP9YPL177C FMP16Q12497 93 aa2.33□□□□□ -2.04
CUP9YPL177C YIL002W-AQ3E7Z5 69 aa2.33□□□□□ -2.04
CUP9YPL177C YPR096CO13587 100 aa2.32□□□□□ -2.04
CUP9YPL177C PET494P07390 489 aaPredicted RBP2.32□□□□□ -2.04
CUP9YPL177C MET2P08465 486 aa2.32□□□□□ -2.04
CUP9YPL177C YOL163WP0CF20 169 aa2.32□□□□□ -2.04
CUP9YPL177C VPS1P21576 704 aaKnown RBP2.32□□□□□ -2.04
CUP9YPL177C ICL1P28240 557 aaPredicted RBP2.32□□□□□ -2.04
CUP9YPL177C SUA5P32579 426 aa2.32□□□□□ -2.04
CUP9YPL177C ALK2P32789 676 aaPredicted RBP2.32□□□□□ -2.04
CUP9YPL177C COT1P32798 439 aa2.32□□□□□ -2.04
CUP9YPL177C SDH4P37298 181 aa2.32□□□□□ -2.04
CUP9YPL177C YER084WP40057 128 aa2.32□□□□□ -2.04
CUP9YPL177C BUD13P46947 266 aaPredicted RBP2.32□□□□□ -2.04
CUP9YPL177C PEX31P53203 462 aa2.32□□□□□ -2.04
CUP9YPL177C SWT21P53873 357 aaPredicted RBP2.32□□□□□ -2.04
CUP9YPL177C DIA1P54005 336 aa2.32□□□□□ -2.04
CUP9YPL177C YDR114CQ04597 100 aa2.32□□□□□ -2.04
CUP9YPL177C NNT1Q05874 261 aa2.32□□□□□ -2.04
CUP9YPL177C YDL144CQ07589 356 aa2.32□□□□□ -2.04
CUP9YPL177C ATG5Q12380 294 aa2.32□□□□□ -2.04
CUP9YPL177C MRX4Q12467 430 aa2.32□□□□□ -2.04
CUP9YPL177C RPC40P07703 335 aaKnown RBP2.31□□□□□ -2.04
CUP9YPL177C YSR3P23501 404 aa2.31□□□□□ -2.04
CUP9YPL177C MIG1P27705 504 aa2.31□□□□□ -2.04
CUP9YPL177C FMP33P46998 180 aa2.31□□□□□ -2.04
CUP9YPL177C YGL088WP53151 121 aa2.31□□□□□ -2.04
CUP9YPL177C CPD1P53314 239 aa2.31□□□□□ -2.04
CUP9YPL177C EGD1Q02642 157 aaKnown RBP2.31□□□□□ -2.04
CUP9YPL177C TAF9Q05027 157 aa2.31□□□□□ -2.04
CUP9YPL177C LOA1Q06508 300 aa2.31□□□□□ -2.04
CUP9YPL177C RLP24Q07915 199 aaKnown RBP2.31□□□□□ -2.04
CUP9YPL177C PRR2Q12310 699 aa2.31□□□□□ -2.04
CUP9YPL177C KRE1P17260 313 aa2.3□□□□□ -2.04
CUP9YPL177C PPQ1P32945 549 aa2.3□□□□□ -2.04
CUP9YPL177C POP8P38208 133 aa2.3□□□□□ -2.04
CUP9YPL177C ATG12P38316 186 aa2.3□□□□□ -2.04
CUP9YPL177C HSH155P49955 971 aaKnown RBP2.3□□□□□ -2.04
CUP9YPL177C MIG2P53035 382 aa2.3□□□□□ -2.04
CUP9YPL177C COG7P53195 279 aa2.3□□□□□ -2.04
CUP9YPL177C ALG9P53868 555 aaKnown RBP2.3□□□□□ -2.04
CUP9YPL177C CDC14Q00684 551 aa2.3□□□□□ -2.04
CUP9YPL177C VPS60Q03390 229 aa2.3□□□□□ -2.04
CUP9YPL177C VBA1Q04301 562 aa2.3□□□□□ -2.04
CUP9YPL177C CAT2P32796 670 aaKnown RBP2.29□□□□□ -2.04
CUP9YPL177C IBA57P47158 497 aa2.29□□□□□ -2.04
CUP9YPL177C FMP41P53889 259 aaKnown RBP2.29□□□□□ -2.04
CUP9YPL177C PAN1P32521 1480 aa2.28□□□□□ -2.04
CUP9YPL177C TDH2P00358 332 aaKnown RBP2.28□□□□□ -2.04
CUP9YPL177C RPS3P05750 240 aaKnown RBP2.28□□□□□ -2.04
CUP9YPL177C OSM1P21375 501 aaKnown RBP2.28□□□□□ -2.04
CUP9YPL177C KRE6P32486 720 aa2.28□□□□□ -2.04
CUP9YPL177C TRM7P38238 310 aaKnown RBP2.28□□□□□ -2.04
CUP9YPL177C PHO89P38361 574 aa2.28□□□□□ -2.04
CUP9YPL177C PEX18P38855 283 aa2.28□□□□□ -2.04
CUP9YPL177C LSB1P53281 241 aa2.28□□□□□ -2.04
CUP9YPL177C SPP2Q02521 185 aa2.28□□□□□ -2.04
CUP9YPL177C TVP15Q03860 143 aa2.28□□□□□ -2.04
CUP9YPL177C YLL007CQ07799 665 aa2.28□□□□□ -2.04
CUP9YPL177C YMR316C-AI2HB70 103 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms