RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W CDC14Q00684 551 aa3.4□□□□□ -1.87
VPS28YPL065W VBA1Q04301 562 aa3.4□□□□□ -1.87
VPS28YPL065W CSI1Q04368 295 aa3.4□□□□□ -1.87
VPS28YPL065W YLL007CQ07799 665 aa3.4□□□□□ -1.87
VPS28YPL065W IMP1P28627 190 aa3.39□□□□□ -1.87
VPS28YPL065W TPS2P31688 896 aaKnown RBP3.39□□□□□ -1.87
VPS28YPL065W PRY2P36110 329 aa3.39□□□□□ -1.87
VPS28YPL065W SCC4P40090 624 aa3.39□□□□□ -1.87
VPS28YPL065W AVT7P40501 490 aa3.39□□□□□ -1.87
VPS28YPL065W YFL064CP43540 174 aa3.39□□□□□ -1.87
VPS28YPL065W MRX5P47007 382 aa3.39□□□□□ -1.87
VPS28YPL065W YPL113CQ02961 396 aa3.39□□□□□ -1.87
VPS28YPL065W ARC18Q05933 178 aaKnown RBP3.39□□□□□ -1.87
VPS28YPL065W CUP2P15315 225 aa3.38□□□□□ -1.87
VPS28YPL065W CDC42P19073 191 aa3.38□□□□□ -1.87
VPS28YPL065W VPH2P32341 215 aa3.38□□□□□ -1.87
VPS28YPL065W MRPL3P36516 390 aa3.38□□□□□ -1.87
VPS28YPL065W RCY1P39531 840 aa3.38□□□□□ -1.87
VPS28YPL065W PRP24P49960 444 aaKnown RBP3.38□□□□□ -1.87
VPS28YPL065W PEX31P53203 462 aa3.38□□□□□ -1.87
VPS28YPL065W PET494P07390 489 aaPredicted RBP3.37□□□□□ -1.87
VPS28YPL065W SUA5P32579 426 aa3.37□□□□□ -1.87
VPS28YPL065W KRE29P40026 464 aa3.37□□□□□ -1.87
VPS28YPL065W ZRG17P53735 605 aa3.37□□□□□ -1.87
VPS28YPL065W MRS2Q01926 470 aa3.37□□□□□ -1.87
VPS28YPL065W YML018CQ03730 393 aa3.37□□□□□ -1.87
VPS28YPL065W TAF9Q05027 157 aa3.37□□□□□ -1.87
VPS28YPL065W ATG15P25641 520 aa3.36□□□□□ -1.87
VPS28YPL065W FMT1P32785 401 aa3.36□□□□□ -1.87
VPS28YPL065W SEN34P39707 275 aa3.36□□□□□ -1.87
VPS28YPL065W LIF1P53150 421 aa3.36□□□□□ -1.87
VPS28YPL065W KAP95Q06142 861 aaKnown RBP3.36□□□□□ -1.87
VPS28YPL065W SSK22P25390 1331 aaPredicted RBP3.36□□□□□ -1.87
VPS28YPL065W POF1P25576 258 aa3.35□□□□□ -1.87
VPS28YPL065W ATG12P38316 186 aa3.35□□□□□ -1.87
VPS28YPL065W YIR035CP40579 254 aa3.35□□□□□ -1.87
VPS28YPL065W PFS2P42841 465 aaKnown RBP3.35□□□□□ -1.87
VPS28YPL065W YJL118WP47022 219 aa3.35□□□□□ -1.87
VPS28YPL065W IBA57P47158 497 aa3.35□□□□□ -1.87
VPS28YPL065W MPP6P53725 186 aaPredicted RBP3.35□□□□□ -1.87
VPS28YPL065W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
VPS28YPL065W VPS60Q03390 229 aa3.35□□□□□ -1.87
VPS28YPL065W SFH1Q06168 426 aa3.35□□□□□ -1.87
VPS28YPL065W GMC2Q06201 188 aa3.35□□□□□ -1.87
VPS28YPL065W LOA1Q06508 300 aa3.35□□□□□ -1.87
VPS28YPL065W ARV1Q06541 321 aa3.35□□□□□ -1.87
VPS28YPL065W YPL264CQ08980 353 aa3.35□□□□□ -1.87
VPS28YPL065W RPS3P05750 240 aaKnown RBP3.34□□□□□ -1.87
VPS28YPL065W PRE7P23724 241 aaKnown RBP3.34□□□□□ -1.87
VPS28YPL065W ARO4P32449 370 aaKnown RBP3.34□□□□□ -1.87
VPS28YPL065W AST1P35183 429 aa3.34□□□□□ -1.87
VPS28YPL065W COA1P40452 197 aa3.34□□□□□ -1.87
VPS28YPL065W UFD1P53044 361 aa3.34□□□□□ -1.87
VPS28YPL065W COX20Q04935 205 aa3.34□□□□□ -1.87
VPS28YPL065W RPL24AP04449 155 aaKnown RBP3.33□□□□□ -1.88
VPS28YPL065W RPP0P05317 312 aaKnown RBP3.33□□□□□ -1.88
VPS28YPL065W MET16P18408 261 aaPredicted RBP3.33□□□□□ -1.88
VPS28YPL065W AGA2P32781 87 aa3.33□□□□□ -1.88
VPS28YPL065W COT1P32798 439 aa3.33□□□□□ -1.88
VPS28YPL065W YBL081WP38180 368 aaKnown RBP3.33□□□□□ -1.88
VPS28YPL065W YIL059CP40520 121 aa3.33□□□□□ -1.88
VPS28YPL065W COS4P43542 379 aa3.33□□□□□ -1.88
VPS28YPL065W KAP114P53067 1004 aa3.33□□□□□ -1.88
VPS28YPL065W YDR222WQ04925 415 aa3.33□□□□□ -1.88
VPS28YPL065W YPR195CQ06594 109 aa3.33□□□□□ -1.88
VPS28YPL065W RRT8Q08219 342 aa3.33□□□□□ -1.88
VPS28YPL065W VPS1P21576 704 aaKnown RBP3.32□□□□□ -1.88
VPS28YPL065W CSE1P33307 960 aa3.32□□□□□ -1.88
VPS28YPL065W HSM3P38348 480 aa3.32□□□□□ -1.88
VPS28YPL065W SYS1P41544 203 aa3.32□□□□□ -1.88
VPS28YPL065W COG7P53195 279 aa3.32□□□□□ -1.88
VPS28YPL065W OSH6Q02201 448 aa3.32□□□□□ -1.88
VPS28YPL065W GTO3Q04806 366 aa3.32□□□□□ -1.88
VPS28YPL065W PRM7Q12459 698 aa3.32□□□□□ -1.88
VPS28YPL065W COX2P00410 251 aa3.31□□□□□ -1.88
VPS28YPL065W POL30P15873 258 aaKnown RBP3.31□□□□□ -1.88
VPS28YPL065W PHO80P20052 293 aa3.31□□□□□ -1.88
VPS28YPL065W RPT5P33297 434 aaKnown RBP3.31□□□□□ -1.88
VPS28YPL065W YUH1P35127 236 aa3.31□□□□□ -1.88
VPS28YPL065W PET100P38958 111 aa3.31□□□□□ -1.88
VPS28YPL065W PRM9P39551 298 aa3.31□□□□□ -1.88
VPS28YPL065W AVT6P40074 448 aa3.31□□□□□ -1.88
VPS28YPL065W SER33P40510 469 aa3.31□□□□□ -1.88
VPS28YPL065W FMP41P53889 259 aaKnown RBP3.31□□□□□ -1.88
VPS28YPL065W YDL144CQ07589 356 aa3.31□□□□□ -1.88
VPS28YPL065W PER33Q12144 273 aa3.31□□□□□ -1.88
VPS28YPL065W IES3Q12345 250 aa3.31□□□□□ -1.88
VPS28YPL065W POP8P38208 133 aa3.3□□□□□ -1.88
VPS28YPL065W CPR7P47103 393 aa3.3□□□□□ -1.88
VPS28YPL065W SWT21P53873 357 aaPredicted RBP3.3□□□□□ -1.88
VPS28YPL065W TRM44Q02648 567 aaKnown RBP3.3□□□□□ -1.88
VPS28YPL065W OST6Q03723 332 aa3.3□□□□□ -1.88
VPS28YPL065W SEC10Q06245 871 aa3.3□□□□□ -1.88
VPS28YPL065W SGT2Q12118 346 aaKnown RBP3.3□□□□□ -1.88
VPS28YPL065W YOL107WQ12239 342 aa3.3□□□□□ -1.88
VPS28YPL065W YMR316C-AI2HB70 103 aa3.29□□□□□ -1.88
VPS28YPL065W RPS23AP0CX29 145 aaKnown RBP3.29□□□□□ -1.88
VPS28YPL065W RPS23BP0CX30 145 aa3.29□□□□□ -1.88
VPS28YPL065W CAT2P32796 670 aaKnown RBP3.29□□□□□ -1.88
VPS28YPL065W YFR045WP43617 309 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms