RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W RNY1Q02933 434 aaKnown RBP2.06□□□□□ -2.08
PEP12YOR036W TAF9Q05027 157 aa2.06□□□□□ -2.08
PEP12YOR036W PIN3Q06449 215 aa2.06□□□□□ -2.08
PEP12YOR036W ARV1Q06541 321 aa2.06□□□□□ -2.08
PEP12YOR036W DIB1Q06819 143 aaPredicted RBP2.06□□□□□ -2.08
PEP12YOR036W SGT2Q12118 346 aaKnown RBP2.06□□□□□ -2.08
PEP12YOR036W TY3A-GQ12173 290 aa2.06□□□□□ -2.08
PEP12YOR036W RAX2Q12465 1220 aa2.06□□□□□ -2.08
PEP12YOR036W YDL012CQ12489 107 aa2.06□□□□□ -2.08
PEP12YOR036W DFM1Q12743 341 aaKnown RBP2.06□□□□□ -2.08
PEP12YOR036W TY3A-IQ99219 290 aa2.06□□□□□ -2.08
PEP12YOR036W ADH1P00330 348 aaKnown RBP2.05□□□□□ -2.08
PEP12YOR036W HIS1P00498 297 aaKnown RBP2.05□□□□□ -2.08
PEP12YOR036W RPS3P05750 240 aaKnown RBP2.05□□□□□ -2.08
PEP12YOR036W RAD3P06839 778 aa2.05□□□□□ -2.08
PEP12YOR036W DAL82P21705 255 aa2.05□□□□□ -2.08
PEP12YOR036W POF1P25576 258 aa2.05□□□□□ -2.08
PEP12YOR036W ARO4P32449 370 aaKnown RBP2.05□□□□□ -2.08
PEP12YOR036W CDC13P32797 924 aaKnown RBP2.05□□□□□ -2.08
PEP12YOR036W PRS1P32895 427 aaKnown RBP2.05□□□□□ -2.08
PEP12YOR036W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
PEP12YOR036W UTH1P36135 365 aa2.05□□□□□ -2.08
PEP12YOR036W FRM2P37261 193 aa2.05□□□□□ -2.08
PEP12YOR036W ECM34P38728 170 aa2.05□□□□□ -2.08
PEP12YOR036W YHR045WP38775 560 aa2.05□□□□□ -2.08
PEP12YOR036W SHC1P39000 512 aa2.05□□□□□ -2.08
PEP12YOR036W RRT13P40042 185 aa2.05□□□□□ -2.08
PEP12YOR036W FMC1P40491 155 aa2.05□□□□□ -2.08
PEP12YOR036W BNA6P43619 295 aa2.05□□□□□ -2.08
PEP12YOR036W HIT1P46973 164 aa2.05□□□□□ -2.08
PEP12YOR036W VEL1P53058 206 aa2.05□□□□□ -2.08
PEP12YOR036W LIF1P53150 421 aa2.05□□□□□ -2.08
PEP12YOR036W FMP48P53233 369 aa2.05□□□□□ -2.08
PEP12YOR036W VPS60Q03390 229 aa2.05□□□□□ -2.08
PEP12YOR036W OST6Q03723 332 aa2.05□□□□□ -2.08
PEP12YOR036W SFH1Q06168 426 aa2.05□□□□□ -2.08
PEP12YOR036W SDO1Q07953 250 aaKnown RBP2.05□□□□□ -2.08
PEP12YOR036W YOL029CQ08187 201 aa2.05□□□□□ -2.08
PEP12YOR036W BTS1Q12051 335 aa2.05□□□□□ -2.08
PEP12YOR036W SME1Q12330 94 aaPredicted RBP2.05□□□□□ -2.08
PEP12YOR036W ATG31Q12421 196 aa2.05□□□□□ -2.08
PEP12YOR036W YAL067W-AQ8TGK6 75 aa2.05□□□□□ -2.08
PEP12YOR036W FAB1P34756 2278 aa2.05□□□□□ -2.08
PEP12YOR036W YAL064W-BO13512 126 aa2.04□□□□□ -2.08
PEP12YOR036W ATG15P25641 520 aa2.04□□□□□ -2.08
PEP12YOR036W PEX3P28795 441 aa2.04□□□□□ -2.08
PEP12YOR036W AIM29P36154 155 aa2.04□□□□□ -2.08
PEP12YOR036W MRPL3P36516 390 aa2.04□□□□□ -2.08
PEP12YOR036W MRX3P38172 270 aa2.04□□□□□ -2.08
PEP12YOR036W ATG12P38316 186 aa2.04□□□□□ -2.08
PEP12YOR036W PRS2P38620 318 aaKnown RBP2.04□□□□□ -2.08
PEP12YOR036W BIG1P38813 335 aa2.04□□□□□ -2.08
PEP12YOR036W SEO1P39709 593 aa2.04□□□□□ -2.08
PEP12YOR036W UFE1P41834 346 aa2.04□□□□□ -2.08
PEP12YOR036W YFL064CP43540 174 aa2.04□□□□□ -2.08
PEP12YOR036W ASG7P46993 209 aa2.04□□□□□ -2.08
PEP12YOR036W TIM21P53220 239 aa2.04□□□□□ -2.08
PEP12YOR036W ACT1P60010 375 aaKnown RBP2.04□□□□□ -2.08
PEP12YOR036W PET117Q02771 107 aa2.04□□□□□ -2.08
PEP12YOR036W INP1Q03694 420 aa2.04□□□□□ -2.08
PEP12YOR036W YMR244WQ04018 355 aa2.04□□□□□ -2.08
PEP12YOR036W ECM19Q06011 112 aa2.04□□□□□ -2.08
PEP12YOR036W SEC10Q06245 871 aa2.04□□□□□ -2.08
PEP12YOR036W LOA1Q06508 300 aa2.04□□□□□ -2.08
PEP12YOR036W RUD3Q12234 484 aaKnown RBP2.04□□□□□ -2.08
PEP12YOR036W YOS9Q99220 542 aa2.04□□□□□ -2.08
PEP12YOR036W MRP1P10662 321 aaKnown RBP2.03□□□□□ -2.08
PEP12YOR036W YCR025CP25352 136 aa2.03□□□□□ -2.08
PEP12YOR036W ZRT3P34240 503 aa2.03□□□□□ -2.08
PEP12YOR036W DBP7P36120 742 aaKnown RBP2.03□□□□□ -2.08
PEP12YOR036W MRP21P38175 177 aa2.03□□□□□ -2.08
PEP12YOR036W DSN1P40568 576 aa2.03□□□□□ -2.08
PEP12YOR036W GCN20P43535 752 aaKnown RBP2.03□□□□□ -2.08
PEP12YOR036W NBP35P52920 328 aa2.03□□□□□ -2.08
PEP12YOR036W PEX31P53203 462 aa2.03□□□□□ -2.08
PEP12YOR036W SWS2P53937 143 aa2.03□□□□□ -2.08
PEP12YOR036W TLG1Q03322 224 aa2.03□□□□□ -2.08
PEP12YOR036W SDC1Q03323 175 aa2.03□□□□□ -2.08
PEP12YOR036W CWC21Q03375 135 aaKnown RBP2.03□□□□□ -2.08
PEP12YOR036W UTP15Q04305 513 aaKnown RBP2.03□□□□□ -2.08
PEP12YOR036W YLR283WQ05867 314 aa2.03□□□□□ -2.08
PEP12YOR036W CTR3Q06686 241 aa2.03□□□□□ -2.08
PEP12YOR036W MCH1Q07376 486 aa2.03□□□□□ -2.08
PEP12YOR036W CSM4Q08955 156 aa2.03□□□□□ -2.08
PEP12YOR036W PER33Q12144 273 aa2.03□□□□□ -2.08
PEP12YOR036W TIR4Q12218 487 aaPredicted RBP2.03□□□□□ -2.08
PEP12YOR036W YOR029WQ12243 111 aa2.03□□□□□ -2.08
PEP12YOR036W YAL063C-AQ3E791 96 aa2.03□□□□□ -2.08
PEP12YOR036W STH1P32597 1359 aa2.02□□□□□ -2.09
PEP12YOR036W RPS19AP07280 144 aaKnown RBP2.02□□□□□ -2.09
PEP12YOR036W RPS19BP07281 144 aaPredicted RBP2.02□□□□□ -2.09
PEP12YOR036W RPB9P27999 122 aa2.02□□□□□ -2.09
PEP12YOR036W ALK2P32789 676 aaPredicted RBP2.02□□□□□ -2.09
PEP12YOR036W MRPS9P38120 278 aa2.02□□□□□ -2.09
PEP12YOR036W KRE29P40026 464 aa2.02□□□□□ -2.09
PEP12YOR036W YER085CP40058 173 aa2.02□□□□□ -2.09
PEP12YOR036W SER33P40510 469 aa2.02□□□□□ -2.09
PEP12YOR036W YIL054WP40524 105 aa2.02□□□□□ -2.09
PEP12YOR036W COG7P53195 279 aa2.02□□□□□ -2.09
PEP12YOR036W YGR067CP53243 804 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms