RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W VPS73P53142 486 aaKnown RBP2.21□□□□□ -2.06
UBP15YMR304W YGR015CP53208 328 aa2.21□□□□□ -2.06
UBP15YMR304W YDC1Q02896 317 aa2.21□□□□□ -2.06
UBP15YMR304W EST3Q03096 181 aa2.21□□□□□ -2.06
UBP15YMR304W SEC13Q04491 297 aaKnown RBP2.21□□□□□ -2.06
UBP15YMR304W BSP1Q06604 576 aa2.21□□□□□ -2.06
UBP15YMR304W HDA2Q06629 674 aa2.21□□□□□ -2.06
UBP15YMR304W IRC13Q08630 104 aa2.21□□□□□ -2.06
UBP15YMR304W MBF1O14467 151 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W PUT2P07275 575 aa2.2□□□□□ -2.06
UBP15YMR304W RFA1P22336 621 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W CPR2P23285 205 aa2.2□□□□□ -2.06
UBP15YMR304W RNQ1P25367 405 aa2.2□□□□□ -2.06
UBP15YMR304W GEX1P25596 615 aa2.2□□□□□ -2.06
UBP15YMR304W CSM1P25651 190 aa2.2□□□□□ -2.06
UBP15YMR304W ECM25P32525 599 aa2.2□□□□□ -2.06
UBP15YMR304W FRE2P36033 711 aa2.2□□□□□ -2.06
UBP15YMR304W GMH1P36125 273 aa2.2□□□□□ -2.06
UBP15YMR304W COS8P38723 381 aa2.2□□□□□ -2.06
UBP15YMR304W SWD1P39706 426 aa2.2□□□□□ -2.06
UBP15YMR304W TIF34P40217 347 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W PRM5P40476 318 aa2.2□□□□□ -2.06
UBP15YMR304W PAU15P40585 124 aa2.2□□□□□ -2.06
UBP15YMR304W CTF18P49956 741 aa2.2□□□□□ -2.06
UBP15YMR304W HOF1Q05080 669 aa2.2□□□□□ -2.06
UBP15YMR304W FEX1Q08913 375 aa2.2□□□□□ -2.06
UBP15YMR304W RPN13O13563 156 aa2.2□□□□□ -2.06
UBP15YMR304W CDC6P09119 513 aa2.2□□□□□ -2.06
UBP15YMR304W RPL19AP0CX82 189 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W RPL19BP0CX83 189 aaPredicted RBP2.2□□□□□ -2.06
UBP15YMR304W GCS1P35197 352 aa2.2□□□□□ -2.06
UBP15YMR304W PDX3P38075 228 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W MIC12P38341 106 aa2.2□□□□□ -2.06
UBP15YMR304W CRG1P38892 291 aaRIP-Chip data2.2□□□□□ -2.06not detected
UBP15YMR304W VPS52P39904 641 aa2.2□□□□□ -2.06
UBP15YMR304W CAT5P41735 233 aa2.2□□□□□ -2.06
UBP15YMR304W TAX4P47030 604 aa2.2□□□□□ -2.06
UBP15YMR304W YGR126WP53274 230 aa2.2□□□□□ -2.06
UBP15YMR304W YIP3P53633 176 aa2.2□□□□□ -2.06
UBP15YMR304W SPR6Q01684 191 aa2.2□□□□□ -2.06
UBP15YMR304W MSC1Q03104 513 aa2.2□□□□□ -2.06
UBP15YMR304W YMR160WQ03823 816 aa2.2□□□□□ -2.06
UBP15YMR304W DAL4Q04895 635 aa2.2□□□□□ -2.06
UBP15YMR304W TEN1Q07921 160 aa2.2□□□□□ -2.06
UBP15YMR304W YPL264CQ08980 353 aa2.2□□□□□ -2.06
UBP15YMR304W YKL018C-AQ3E7A7 99 aa2.2□□□□□ -2.06
UBP15YMR304W TPK1P06244 397 aa2.2□□□□□ -2.06
UBP15YMR304W GAS1P22146 559 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W EXG1P23776 448 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W BUD5P25300 642 aaPredicted RBP2.2□□□□□ -2.06
UBP15YMR304W ARO7P32178 256 aa2.2□□□□□ -2.06
UBP15YMR304W TIP20P33891 701 aa2.2□□□□□ -2.06
UBP15YMR304W PET10P36139 283 aa2.2□□□□□ -2.06
UBP15YMR304W SLM4P38247 162 aa2.2□□□□□ -2.06
UBP15YMR304W SWC5P38326 303 aa2.2□□□□□ -2.06
UBP15YMR304W PZF1P39933 429 aa2.2□□□□□ -2.06
UBP15YMR304W YFL064CP43540 174 aa2.2□□□□□ -2.06
UBP15YMR304W PUS4P48567 403 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W COX18P53239 316 aa2.2□□□□□ -2.06
UBP15YMR304W YGR066CP53242 292 aa2.2□□□□□ -2.06
UBP15YMR304W NUP116Q02630 1113 aa2.2□□□□□ -2.06
UBP15YMR304W YPL067CQ02754 198 aa2.2□□□□□ -2.06
UBP15YMR304W DIG2Q03373 323 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W ECM18Q04623 453 aa2.2□□□□□ -2.06
UBP15YMR304W CWC2Q12046 339 aaPredicted RBP2.2□□□□□ -2.06
UBP15YMR304W RDL1Q12305 139 aaKnown RBP2.2□□□□□ -2.06
UBP15YMR304W SPT15P13393 240 aaKnown RBP2.19□□□□□ -2.06
UBP15YMR304W KRE1P17260 313 aa2.19□□□□□ -2.06
UBP15YMR304W GRX2P17695 143 aaKnown RBP2.19□□□□□ -2.06
UBP15YMR304W SEC22P22214 214 aa2.19□□□□□ -2.06
UBP15YMR304W NNK1P36003 928 aa2.19□□□□□ -2.06
UBP15YMR304W PCM1P38628 557 aaKnown RBP2.19□□□□□ -2.06
UBP15YMR304W MET30P39014 640 aa2.19□□□□□ -2.06
UBP15YMR304W YAR028WP39548 234 aa2.19□□□□□ -2.06
UBP15YMR304W GTS1P40956 396 aa2.19□□□□□ -2.06
UBP15YMR304W GZF3P42944 551 aaKnown RBP2.19□□□□□ -2.06
UBP15YMR304W IRC7P43623 340 aa2.19□□□□□ -2.06
UBP15YMR304W MRPS35P53292 345 aa2.19□□□□□ -2.06
UBP15YMR304W MRPL13Q02204 264 aa2.19□□□□□ -2.06
UBP15YMR304W GIP3Q03016 1276 aa2.19□□□□□ -2.06
UBP15YMR304W EFR3Q03653 782 aaKnown RBP2.19□□□□□ -2.06
UBP15YMR304W SCW10Q04951 389 aa2.19□□□□□ -2.06
UBP15YMR304W CYK3Q07533 885 aa2.19□□□□□ -2.06
UBP15YMR304W RRG7Q08774 242 aaPredicted RBP2.19□□□□□ -2.06
UBP15YMR304W OXR1Q08952 273 aa2.19□□□□□ -2.06
UBP15YMR304W AFT2Q08957 416 aa2.19□□□□□ -2.06
UBP15YMR304W CBS2P14905 389 aa2.19□□□□□ -2.06
UBP15YMR304W MSN2P33748 704 aa2.19□□□□□ -2.06
UBP15YMR304W ATG7P38862 630 aa2.19□□□□□ -2.06
UBP15YMR304W YER121WP40076 114 aa2.19□□□□□ -2.06
UBP15YMR304W MGS1P40151 587 aa2.19□□□□□ -2.06
UBP15YMR304W YJR015WP47090 510 aa2.19□□□□□ -2.06
UBP15YMR304W COQ6P53318 479 aa2.19□□□□□ -2.06
UBP15YMR304W DBP6P53734 629 aaKnown RBP2.19□□□□□ -2.06
UBP15YMR304W NOG1Q02892 647 aaKnown RBP2.19□□□□□ -2.06
UBP15YMR304W SRT1Q03175 343 aa2.19□□□□□ -2.06
UBP15YMR304W CUE4Q04201 117 aaPredicted RBP2.19□□□□□ -2.06
UBP15YMR304W NEJ1Q06148 342 aa2.19□□□□□ -2.06
UBP15YMR304W AIM6Q07716 390 aa2.19□□□□□ -2.06
UBP15YMR304W NRT1Q08485 598 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms