RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W YOR292CQ08743 309 aa1.04□□□□□ -2.24
SPT21YMR179W VIK1Q12045 647 aa1.04□□□□□ -2.24
SPT21YMR179W BTS1Q12051 335 aa1.04□□□□□ -2.24
SPT21YMR179W SSK22P25390 1331 aaPredicted RBP1.04□□□□□ -2.24
SPT21YMR179W MSF1P08425 469 aa1.04□□□□□ -2.24
SPT21YMR179W VPS1P21576 704 aaKnown RBP1.04□□□□□ -2.24
SPT21YMR179W CWP1P28319 239 aa1.04□□□□□ -2.24
SPT21YMR179W AEP1P32493 518 aa1.04□□□□□ -2.24
SPT21YMR179W CDC13P32797 924 aaKnown RBP1.04□□□□□ -2.24
SPT21YMR179W ZRT3P34240 503 aa1.04□□□□□ -2.24
SPT21YMR179W HSM3P38348 480 aa1.04□□□□□ -2.24
SPT21YMR179W RRG9P40156 214 aa1.04□□□□□ -2.24
SPT21YMR179W YAR1P46683 200 aa1.04□□□□□ -2.24
SPT21YMR179W PEX31P53203 462 aa1.04□□□□□ -2.24
SPT21YMR179W YNL134CP53912 376 aaKnown RBP1.04□□□□□ -2.24
SPT21YMR179W ALG11P53954 548 aaKnown RBP1.04□□□□□ -2.24
SPT21YMR179W YNL040WP53960 456 aaPredicted RBP1.04□□□□□ -2.24
SPT21YMR179W YMR244WQ04018 355 aa1.04□□□□□ -2.24
SPT21YMR179W SEC13Q04491 297 aaKnown RBP1.04□□□□□ -2.24
SPT21YMR179W TAF9Q05027 157 aa1.04□□□□□ -2.24
SPT21YMR179W YLR173WQ06247 608 aa1.04□□□□□ -2.24
SPT21YMR179W YOR114WQ12219 294 aa1.04□□□□□ -2.24
SPT21YMR179W YAL067W-AQ8TGK6 75 aa1.04□□□□□ -2.24
SPT21YMR179W HIS1P00498 297 aaKnown RBP1.03□□□□□ -2.24
SPT21YMR179W PET494P07390 489 aaPredicted RBP1.03□□□□□ -2.24
SPT21YMR179W DAL81P21657 970 aa1.03□□□□□ -2.24
SPT21YMR179W DAL82P21705 255 aa1.03□□□□□ -2.24
SPT21YMR179W POF1P25576 258 aa1.03□□□□□ -2.24
SPT21YMR179W SUA5P32579 426 aa1.03□□□□□ -2.24
SPT21YMR179W CSE1P33307 960 aa1.03□□□□□ -2.24
SPT21YMR179W DBP7P36120 742 aaKnown RBP1.03□□□□□ -2.24
SPT21YMR179W FRM2P37261 193 aa1.03□□□□□ -2.24
SPT21YMR179W MBA1P38300 278 aa1.03□□□□□ -2.24
SPT21YMR179W ECM34P38728 170 aa1.03□□□□□ -2.24
SPT21YMR179W YHR045WP38775 560 aa1.03□□□□□ -2.24
SPT21YMR179W SPT8P38915 602 aa1.03□□□□□ -2.24
SPT21YMR179W AGX1P43567 385 aa1.03□□□□□ -2.24
SPT21YMR179W IBA57P47158 497 aa1.03□□□□□ -2.24
SPT21YMR179W NUP84P52891 726 aa1.03□□□□□ -2.24
SPT21YMR179W MNT4P53745 580 aa1.03□□□□□ -2.24
SPT21YMR179W YML018CQ03730 393 aa1.03□□□□□ -2.24
SPT21YMR179W UTP15Q04305 513 aaKnown RBP1.03□□□□□ -2.24
SPT21YMR179W SFH1Q06168 426 aa1.03□□□□□ -2.24
SPT21YMR179W TRM10Q12400 293 aa1.03□□□□□ -2.24
SPT21YMR179W RPP0P05317 312 aaKnown RBP1.03□□□□□ -2.25
SPT21YMR179W RPS3P05750 240 aaKnown RBP1.03□□□□□ -2.25
SPT21YMR179W RRT12P25381 491 aa1.03□□□□□ -2.25
SPT21YMR179W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.03□□□□□ -2.25not detected
SPT21YMR179W BIG1P38813 335 aa1.03□□□□□ -2.25
SPT21YMR179W NPT1P39683 429 aaKnown RBP1.03□□□□□ -2.25
SPT21YMR179W AVT7P40501 490 aa1.03□□□□□ -2.25
SPT21YMR179W YFL064CP43540 174 aa1.03□□□□□ -2.25
SPT21YMR179W MIC19P43594 170 aa1.03□□□□□ -2.25
SPT21YMR179W TAD2P47058 250 aa1.03□□□□□ -2.25
SPT21YMR179W TIM11P81449 96 aaPredicted RBP1.03□□□□□ -2.25
SPT21YMR179W TRM44Q02648 567 aaKnown RBP1.03□□□□□ -2.25
SPT21YMR179W OST6Q03723 332 aa1.03□□□□□ -2.25
SPT21YMR179W ECM19Q06011 112 aa1.03□□□□□ -2.25
SPT21YMR179W ARV1Q06541 321 aa1.03□□□□□ -2.25
SPT21YMR179W YPL278CQ08990 100 aa1.03□□□□□ -2.25
SPT21YMR179W PER33Q12144 273 aa1.03□□□□□ -2.25
SPT21YMR179W TY3A-GQ12173 290 aa1.03□□□□□ -2.25
SPT21YMR179W MED4Q12343 284 aa1.03□□□□□ -2.25
SPT21YMR179W DFM1Q12743 341 aaKnown RBP1.03□□□□□ -2.25
SPT21YMR179W TY3A-IQ99219 290 aa1.03□□□□□ -2.25
SPT21YMR179W RAD3P06839 778 aa1.02□□□□□ -2.25
SPT21YMR179W MRP1P10662 321 aaKnown RBP1.02□□□□□ -2.25
SPT21YMR179W COX10P21592 462 aa1.02□□□□□ -2.25
SPT21YMR179W YCR025CP25352 136 aa1.02□□□□□ -2.25
SPT21YMR179W ARO4P32449 370 aaKnown RBP1.02□□□□□ -2.25
SPT21YMR179W AIM29P36154 155 aa1.02□□□□□ -2.25
SPT21YMR179W ATG12P38316 186 aa1.02□□□□□ -2.25
SPT21YMR179W KRE29P40026 464 aa1.02□□□□□ -2.25
SPT21YMR179W DDI1P40087 428 aa1.02□□□□□ -2.25
SPT21YMR179W BNA6P43619 295 aa1.02□□□□□ -2.25
SPT21YMR179W LIA1P47120 325 aaKnown RBP1.02□□□□□ -2.25
SPT21YMR179W YGL118CP53132 145 aa1.02□□□□□ -2.25
SPT21YMR179W ZRG17P53735 605 aa1.02□□□□□ -2.25
SPT21YMR179W YPL113CQ02961 396 aa1.02□□□□□ -2.25
SPT21YMR179W VPS60Q03390 229 aa1.02□□□□□ -2.25
SPT21YMR179W RNH1Q04740 348 aa1.02□□□□□ -2.25
SPT21YMR179W ADH6Q04894 360 aaKnown RBP1.02□□□□□ -2.25
SPT21YMR179W SEC10Q06245 871 aa1.02□□□□□ -2.25
SPT21YMR179W LOA1Q06508 300 aa1.02□□□□□ -2.25
SPT21YMR179W CTR3Q06686 241 aa1.02□□□□□ -2.25
SPT21YMR179W DIB1Q06819 143 aaPredicted RBP1.02□□□□□ -2.25
SPT21YMR179W SDO1Q07953 250 aaKnown RBP1.02□□□□□ -2.25
SPT21YMR179W YOR029WQ12243 111 aa1.02□□□□□ -2.25
SPT21YMR179W YAL063C-AQ3E791 96 aa1.02□□□□□ -2.25
SPT21YMR179W AUS1Q08409 1394 aa1.02□□□□□ -2.25
SPT21YMR179W YAL064W-BO13512 126 aa1.01□□□□□ -2.25
SPT21YMR179W ATG15P25641 520 aa1.01□□□□□ -2.25
SPT21YMR179W RPB9P27999 122 aa1.01□□□□□ -2.25
SPT21YMR179W IMP1P28627 190 aa1.01□□□□□ -2.25
SPT21YMR179W VPH2P32341 215 aa1.01□□□□□ -2.25
SPT21YMR179W ALK2P32789 676 aaPredicted RBP1.01□□□□□ -2.25
SPT21YMR179W MRPL3P36516 390 aa1.01□□□□□ -2.25
SPT21YMR179W PRS4P38063 326 aaPredicted RBP1.01□□□□□ -2.25
SPT21YMR179W PRS2P38620 318 aaKnown RBP1.01□□□□□ -2.25
SPT21YMR179W YIL054WP40524 105 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms