RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C YSW1P38280 609 aa0.89□□□□□ -2.27
VPS20YMR077C YDR089WP38966 869 aa0.89□□□□□ -2.27
VPS20YMR077C PRP39P39682 629 aaKnown RBP0.89□□□□□ -2.27
VPS20YMR077C TIF34P40217 347 aaKnown RBP0.89□□□□□ -2.27
VPS20YMR077C PEP8P40335 379 aa0.89□□□□□ -2.27
VPS20YMR077C RPE1P46969 238 aa0.89□□□□□ -2.27
VPS20YMR077C MRS2Q01926 470 aa0.89□□□□□ -2.27
VPS20YMR077C IRC4Q03036 179 aa0.89□□□□□ -2.27
VPS20YMR077C RAD7P06779 565 aa0.88□□□□□ -2.27
VPS20YMR077C SGA1P08019 549 aa0.88□□□□□ -2.27
VPS20YMR077C TOM40P23644 387 aaKnown RBP0.88□□□□□ -2.27
VPS20YMR077C SPT8P38915 602 aa0.88□□□□□ -2.27
VPS20YMR077C SEC28P40509 296 aaKnown RBP0.88□□□□□ -2.27
VPS20YMR077C MZM1Q03429 123 aaPredicted RBP0.88□□□□□ -2.27
VPS20YMR077C CAB5Q03941 241 aa0.88□□□□□ -2.27
VPS20YMR077C BMH1P29311 267 aaKnown RBP0.87□□□□□ -2.27
VPS20YMR077C KRE6P32486 720 aa0.87□□□□□ -2.27
VPS20YMR077C SFC1P33303 322 aa0.87□□□□□ -2.27
VPS20YMR077C MCH2P36032 473 aa0.87□□□□□ -2.27
VPS20YMR077C YHR035WP38769 630 aa0.87□□□□□ -2.27
VPS20YMR077C LRP1P38801 184 aaKnown RBP0.87□□□□□ -2.27
VPS20YMR077C ALP1P38971 573 aa0.87□□□□□ -2.27
VPS20YMR077C VAB2P40003 282 aa0.87□□□□□ -2.27
VPS20YMR077C YFL040WP43562 540 aa0.87□□□□□ -2.27
VPS20YMR077C DAD3P69850 94 aa0.87□□□□□ -2.27
VPS20YMR077C SPO24Q3E752 67 aa0.87□□□□□ -2.27
VPS20YMR077C PUT1P09368 476 aa0.86□□□□□ -2.27
VPS20YMR077C STE23Q06010 1027 aa0.86□□□□□ -2.27
VPS20YMR077C YGL114WP53134 725 aa0.85□□□□□ -2.27
VPS20YMR077C YMR114CQ04471 368 aaKnown RBP0.85□□□□□ -2.27
VPS20YMR077C YOL019WQ08157 551 aa0.85□□□□□ -2.27
VPS20YMR077C NOT5Q12514 560 aaPredicted RBP0.85□□□□□ -2.27
VPS20YMR077C SCM4P32564 187 aa0.84□□□□□ -2.27
VPS20YMR077C ADH5P38113 351 aaKnown RBP0.84□□□□□ -2.27
VPS20YMR077C GON7P46984 123 aa0.84□□□□□ -2.27
VPS20YMR077C NUP49Q02199 472 aa0.84□□□□□ -2.27
VPS20YMR077C STE3P06783 470 aa0.83□□□□□ -2.28
VPS20YMR077C VPH1P32563 840 aaKnown RBP0.83□□□□□ -2.28
VPS20YMR077C YKR045CP36138 183 aa0.83□□□□□ -2.28
VPS20YMR077C PHO89P38361 574 aa0.83□□□□□ -2.28
VPS20YMR077C YNL146WP53906 100 aa0.83□□□□□ -2.28
VPS20YMR077C BUR2Q05949 395 aa0.83□□□□□ -2.28
VPS20YMR077C IMP3P32899 183 aaPredicted RBP0.82□□□□□ -2.28
VPS20YMR077C YNL143CP53908 130 aa0.82□□□□□ -2.28
VPS20YMR077C ECM18Q04623 453 aa0.82□□□□□ -2.28
VPS20YMR077C NBL1Q3E7Y6 73 aa0.82□□□□□ -2.28
VPS20YMR077C DAD2P36162 133 aa0.81□□□□□ -2.28
VPS20YMR077C YDR262WQ12331 272 aa0.81□□□□□ -2.28
VPS20YMR077C ERG2P32352 222 aa0.8□□□□□ -2.28
VPS20YMR077C ZRT1P32804 376 aa0.8□□□□□ -2.28
VPS20YMR077C RXT2P38255 430 aa0.8□□□□□ -2.28
VPS20YMR077C FRE6Q12473 712 aa0.8□□□□□ -2.28
VPS20YMR077C YBL112CQ3E7Y4 105 aa0.8□□□□□ -2.28
VPS20YMR077C YHI9P38765 294 aa0.79□□□□□ -2.28
VPS20YMR077C JEM1P40358 645 aa0.79□□□□□ -2.28
VPS20YMR077C AVT7P40501 490 aa0.79□□□□□ -2.28
VPS20YMR077C UBC13P52490 153 aa0.79□□□□□ -2.28
VPS20YMR077C SWC4P53201 476 aa0.79□□□□□ -2.28
VPS20YMR077C YGR168CP53293 376 aa0.79□□□□□ -2.28
VPS20YMR077C AEP1P32493 518 aa0.78□□□□□ -2.28
VPS20YMR077C COT1P32798 439 aa0.78□□□□□ -2.28
VPS20YMR077C DRE2P36152 348 aa0.78□□□□□ -2.28
VPS20YMR077C SHQ1P40486 507 aaPredicted RBP0.78□□□□□ -2.28
VPS20YMR077C CIS3P47001 227 aa0.78□□□□□ -2.28
VPS20YMR077C EOS1P53938 366 aa0.78□□□□□ -2.28
VPS20YMR077C YPL039WQ03080 316 aa0.78□□□□□ -2.28
VPS20YMR077C PEX12Q04370 399 aa0.78□□□□□ -2.28
VPS20YMR077C POP8P38208 133 aa0.77□□□□□ -2.29
VPS20YMR077C SEN34P39707 275 aa0.77□□□□□ -2.29
VPS20YMR077C CUE3P53137 624 aaKnown RBP0.77□□□□□ -2.29
VPS20YMR077C DBP9Q06218 594 aaKnown RBP0.77□□□□□ -2.29
VPS20YMR077C SKS1Q12505 502 aa0.77□□□□□ -2.29
VPS20YMR077C YPC1P38298 316 aa0.76□□□□□ -2.29
VPS20YMR077C YHB1P39676 399 aaKnown RBP0.76□□□□□ -2.29
VPS20YMR077C SNX4P47057 423 aa0.76□□□□□ -2.29
VPS20YMR077C INA22P40576 216 aa0.75□□□□□ -2.29
VPS20YMR077C OKP1P53298 406 aa0.75□□□□□ -2.29
VPS20YMR077C SMT3Q12306 101 aaKnown RBP0.75□□□□□ -2.29
VPS20YMR077C IZH4Q99393 312 aa0.75□□□□□ -2.29
VPS20YMR077C YGL010WP25338 174 aa0.74□□□□□ -2.29
VPS20YMR077C TAD2P47058 250 aa0.74□□□□□ -2.29
VPS20YMR077C YPT32P51996 222 aaKnown RBP0.74□□□□□ -2.29
VPS20YMR077C PRM15Q03262 622 aa0.74□□□□□ -2.29
VPS20YMR077C PML1Q07930 204 aaPredicted RBP0.74□□□□□ -2.29
VPS20YMR077C DCN1Q12395 269 aa0.74□□□□□ -2.29
VPS20YMR077C TAL1P15019 335 aaKnown RBP0.73□□□□□ -2.29
VPS20YMR077C DPB2P24482 689 aaPredicted RBP0.73□□□□□ -2.29
VPS20YMR077C YKL162CP36052 402 aa0.73□□□□□ -2.29
VPS20YMR077C LAS1P36146 502 aaPredicted RBP0.73□□□□□ -2.29
VPS20YMR077C RRP42Q12277 265 aaPredicted RBP0.73□□□□□ -2.29
VPS20YMR077C RAD3P06839 778 aa0.72□□□□□ -2.29
VPS20YMR077C RNR2P09938 399 aaKnown RBP0.72□□□□□ -2.29
VPS20YMR077C CCA1P21269 546 aa0.72□□□□□ -2.29
VPS20YMR077C POT1P27796 417 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
VPS20YMR077C CSG2P35206 410 aa0.72□□□□□ -2.29
VPS20YMR077C SIF2P38262 535 aa0.72□□□□□ -2.29
VPS20YMR077C GLE2P40066 365 aa0.72□□□□□ -2.29
VPS20YMR077C ERP4Q12450 207 aa0.72□□□□□ -2.29
VPS20YMR077C MHT1Q12525 324 aa0.72□□□□□ -2.29
VPS20YMR077C RPL18AP0CX49 186 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms