RNA–Protein interactions for RNA: YMR072W

ABF2, Transcript of Mitochondrial DNA-binding protein, yeastyeast

Gene ABF2, Length 552 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF2YMR072W PET117Q02771 107 aa0.35□□□□□ -2.35
ABF2YMR072W TRM82Q03774 444 aa0.35□□□□□ -2.35
ABF2YMR072W PRP42Q03776 544 aaKnown RBP0.35□□□□□ -2.35
ABF2YMR072W UBX2Q04228 584 aa0.35□□□□□ -2.35
ABF2YMR072W MGR3Q04472 501 aa0.35□□□□□ -2.35
ABF2YMR072W ROY1Q04847 553 aa0.35□□□□□ -2.35
ABF2YMR072W INM2Q05533 292 aa0.35□□□□□ -2.35
ABF2YMR072W ATG38Q05789 226 aaKnown RBP0.35□□□□□ -2.35
ABF2YMR072W SUE1Q06524 206 aa0.35□□□□□ -2.35
ABF2YMR072W YPR172WQ06608 200 aa0.35□□□□□ -2.35
ABF2YMR072W IPK1Q06667 281 aa0.35□□□□□ -2.35
ABF2YMR072W ASR1Q06834 288 aa0.35□□□□□ -2.35
ABF2YMR072W DTD1Q07648 150 aaKnown RBP0.35□□□□□ -2.35
ABF2YMR072W YLR031WQ07978 186 aa0.35□□□□□ -2.35
ABF2YMR072W HRD1Q08109 551 aa0.35□□□□□ -2.35
ABF2YMR072W FEX1Q08913 375 aa0.35□□□□□ -2.35
ABF2YMR072W FEX2Q08991 375 aa0.35□□□□□ -2.35
ABF2YMR072W VIK1Q12045 647 aa0.35□□□□□ -2.35
ABF2YMR072W SIA1Q12212 622 aa0.35□□□□□ -2.35
ABF2YMR072W NFI1Q12216 726 aa0.35□□□□□ -2.35
ABF2YMR072W YOR114WQ12219 294 aa0.35□□□□□ -2.35
ABF2YMR072W RPN5Q12250 445 aaKnown RBP0.35□□□□□ -2.35
ABF2YMR072W PST1Q12355 444 aa0.35□□□□□ -2.35
ABF2YMR072W RRP36Q12481 300 aaPredicted RBP0.35□□□□□ -2.35
ABF2YMR072W DCP1Q12517 231 aaPredicted RBP0.35□□□□□ -2.35
ABF2YMR072W RPS28AQ3E7X9 67 aaPredicted RBP0.35□□□□□ -2.35
ABF2YMR072W LAG2Q92325 660 aa0.35□□□□□ -2.35
ABF2YMR072W NUP157P40064 1391 aaKnown RBP0.34□□□□□ -2.35
ABF2YMR072W IPP1P00817 287 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W RPL25P04456 142 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W QCR2P07257 368 aa0.34□□□□□ -2.36
ABF2YMR072W CAR2P07991 424 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W SSA3P09435 649 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W PBI2P0CT04 75 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W RPL23AP0CX41 137 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W RPL23BP0CX42 137 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W ZWF1P11412 505 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W RSR1P13856 272 aa0.34□□□□□ -2.36
ABF2YMR072W FBA1P14540 359 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W YAK1P14680 807 aa0.34□□□□□ -2.36
ABF2YMR072W NSP1P14907 823 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W CBF1P17106 351 aa0.34□□□□□ -2.36
ABF2YMR072W UGA1P17649 471 aa0.34□□□□□ -2.36
ABF2YMR072W UTR1P21373 530 aa0.34□□□□□ -2.36
ABF2YMR072W UBA1P22515 1024 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W TAF2P23255 1407 aa0.34□□□□□ -2.36
ABF2YMR072W MRPL25P23369 157 aa0.34□□□□□ -2.36
ABF2YMR072W HXT2P23585 541 aa0.34□□□□□ -2.36
ABF2YMR072W SEC14P24280 304 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W RNA15P25299 296 aaPredicted RBP0.34□□□□□ -2.36
ABF2YMR072W TRX3P25372 127 aa0.34□□□□□ -2.36
ABF2YMR072W STP22P25604 385 aa0.34□□□□□ -2.36
ABF2YMR072W RPL5P26321 297 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W IMP1P28627 190 aa0.34□□□□□ -2.36
ABF2YMR072W ERG9P29704 444 aa0.34□□□□□ -2.36
ABF2YMR072W HOM6P31116 359 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W KRE6P32486 720 aa0.34□□□□□ -2.36
ABF2YMR072W NRP1P32770 719 aaKnown RBP RIP-Chip data0.34□□□□□ -2.36not detected
ABF2YMR072W PTM1P32857 523 aa0.34□□□□□ -2.36
ABF2YMR072W CSE1P33307 960 aa0.34□□□□□ -2.36
ABF2YMR072W RIB7P33312 244 aa0.34□□□□□ -2.36
ABF2YMR072W PRX1P34227 261 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W YKT6P36015 200 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W YPT52P36018 234 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W JEN1P36035 616 aa0.34□□□□□ -2.36
ABF2YMR072W SRP102P36057 244 aaPredicted RBP0.34□□□□□ -2.36
ABF2YMR072W YKR015CP36111 568 aa0.34□□□□□ -2.36
ABF2YMR072W YBR063CP38083 404 aa0.34□□□□□ -2.36
ABF2YMR072W ZTA1P38230 334 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W SLM4P38247 162 aa0.34□□□□□ -2.36
ABF2YMR072W SPP381P38282 291 aaPredicted RBP0.34□□□□□ -2.36
ABF2YMR072W POP7P38291 140 aa0.34□□□□□ -2.36
ABF2YMR072W MED8P38304 223 aa0.34□□□□□ -2.36
ABF2YMR072W SWC5P38326 303 aa0.34□□□□□ -2.36
ABF2YMR072W PHO89P38361 574 aa0.34□□□□□ -2.36
ABF2YMR072W HIS2P38635 335 aa0.34□□□□□ -2.36
ABF2YMR072W SMF2P38778 549 aa0.34□□□□□ -2.36
ABF2YMR072W LRP1P38801 184 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W CTM1P38818 585 aa0.34□□□□□ -2.36
ABF2YMR072W SUR2P38992 349 aa0.34□□□□□ -2.36
ABF2YMR072W FET3P38993 636 aa0.34□□□□□ -2.36
ABF2YMR072W MNN9P39107 395 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W SOP4P39543 234 aaPredicted RBP0.34□□□□□ -2.36
ABF2YMR072W GIM4P40005 111 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W VTC1P40046 129 aaRIP-Chip data0.34□□□□□ -2.36not detected
ABF2YMR072W SER3P40054 469 aa0.34□□□□□ -2.36
ABF2YMR072W RTR1P40084 226 aaPredicted RBP0.34□□□□□ -2.36
ABF2YMR072W MEP1P40260 492 aa0.34□□□□□ -2.36
ABF2YMR072W PRE6P40303 254 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W PDS1P40316 373 aaPredicted RBP0.34□□□□□ -2.36
ABF2YMR072W SOK1P40317 901 aa0.34□□□□□ -2.36
ABF2YMR072W RFC4P40339 323 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W FMC1P40491 155 aa0.34□□□□□ -2.36
ABF2YMR072W EFM4P40516 257 aa0.34□□□□□ -2.36
ABF2YMR072W YRB2P40517 327 aa0.34□□□□□ -2.36
ABF2YMR072W YIL001WP40560 513 aa0.34□□□□□ -2.36
ABF2YMR072W GCN20P43535 752 aaKnown RBP0.34□□□□□ -2.36
ABF2YMR072W YFL040WP43562 540 aa0.34□□□□□ -2.36
ABF2YMR072W IRC6P43615 237 aa0.34□□□□□ -2.36
ABF2YMR072W RPE1P46969 238 aa0.34□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms