RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeast

Gene CCS1, Length 750 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCS1	YMR038C	ARP10	Q04549	284 aa		4.07	□□□□□ -1.76
CCS1	YMR038C	COX20	Q04935	205 aa		4.07	□□□□□ -1.76
CCS1	YMR038C	ARR1	Q06596	294 aa		4.07	□□□□□ -1.76
CCS1	YMR038C	ARG3	P05150	338 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	MER1	P16523	270 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	PHO91	P27514	894 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	CYS4	P32582	507 aa	Known RBP	4.06	□□□□□ -1.76
CCS1	YMR038C	SSE1	P32589	693 aa	Known RBP	4.06	□□□□□ -1.76
CCS1	YMR038C	YKL102C	P34249	101 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	ZTA1	P38230	334 aa	Known RBP	4.06	□□□□□ -1.76
CCS1	YMR038C	MTC4	P38335	694 aa	Known RBP	4.06	□□□□□ -1.76
CCS1	YMR038C	TSC10	P38342	320 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	BUR6	P40096	142 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	IGO1	P53897	168 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	MTQ1	P53944	314 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	ARV1	Q06541	321 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	PSR1	Q07800	427 aa		4.06	□□□□□ -1.76
CCS1	YMR038C	RDL2	Q08742	149 aa	Known RBP	4.06	□□□□□ -1.76
CCS1	YMR038C	PUT2	P07275	575 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	CAR2	P07991	424 aa	Known RBP	4.05	□□□□□ -1.76
CCS1	YMR038C	RPL35A	P0CX84	120 aa	Known RBP	4.05	□□□□□ -1.76
CCS1	YMR038C	RPL35B	P0CX85	120 aa	Known RBP	4.05	□□□□□ -1.76
CCS1	YMR038C	SCO1	P23833	295 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	RAD14	P28519	371 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	EHD3	P28817	500 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	COS9	P36034	407 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	YBR220C	P38318	560 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	RCK1	P38622	512 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	YHR180W	P38868	163 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	YEL068C	P39977	110 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	YER188W	P40103	239 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	CAK1	P43568	368 aa	Predicted RBP	4.05	□□□□□ -1.76
CCS1	YMR038C	PKP2	P53170	491 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	YPL039W	Q03080	316 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	MSA1	Q08471	629 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	HNT3	Q08702	217 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	DYN1	P36022	4092 aa		4.05	□□□□□ -1.76
CCS1	YMR038C	MF(ALPHA)1	P01149	165 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	RPL15A	P05748	204 aa	Known RBP	4.04	□□□□□ -1.76
CCS1	YMR038C	ERD2	P18414	219 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	UTR1	P21373	530 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	CLB3	P24870	427 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	SIP2	P34164	415 aa	Known RBP	4.04	□□□□□ -1.76
CCS1	YMR038C	MRPL39	P36533	70 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	RFC4	P40339	323 aa	Known RBP	4.04	□□□□□ -1.76
CCS1	YMR038C	ADO1	P47143	340 aa	Known RBP	4.04	□□□□□ -1.76
CCS1	YMR038C	PCP1	P53259	346 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	YGR126W	P53274	230 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	SYF2	P53277	215 aa	Predicted RBP	4.04	□□□□□ -1.76
CCS1	YMR038C	YNL181W	P53878	407 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	MRP51	Q02950	344 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	FMN1	Q03778	218 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	URC2	Q04411	772 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	ATG26	Q06321	1198 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	BTS1	Q12051	335 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	MCP1	Q12106	302 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	YDL180W	Q12301	547 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	SET6	Q12529	373 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	YKL068W-A	Q3E826	78 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	YPT6	Q99260	215 aa		4.04	□□□□□ -1.76
CCS1	YMR038C	YAL064W-B	O13512	126 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	RPB8	P20436	146 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	RPS1B	P23248	255 aa	Known RBP	4.03	□□□□□ -1.76
CCS1	YMR038C	SWH1	P35845	1188 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	YPK3	P38070	525 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	ROT2	P38138	954 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	BIG1	P38813	335 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	MNN9	P39107	395 aa	Known RBP	4.03	□□□□□ -1.76
CCS1	YMR038C	HPM1	P40481	377 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	SHE4	P51534	789 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	YNL234W	P53857	426 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	YMR254C	Q04838	102 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	BRX1	Q08235	291 aa	Known RBP	4.03	□□□□□ -1.76
CCS1	YMR038C	MED2	Q12124	431 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	NKP1	Q12493	238 aa		4.03	□□□□□ -1.76
CCS1	YMR038C	RHO1	P06780	209 aa	Known RBP	4.02	□□□□□ -1.77
CCS1	YMR038C	EXO70	P19658	623 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	RRP4	P38792	359 aa	Known RBP	4.02	□□□□□ -1.77
CCS1	YMR038C	PHO90	P39535	881 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	MTW1	P39731	289 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	YND1	P40009	630 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	RTS2	P40962	232 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	DIA3	P52290	468 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	SBH2	P52871	88 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	TWF1	P53250	332 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	MNT4	P53745	580 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	HXT11	P54862	567 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	KAP120	Q02932	1032 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	KRE28	Q04431	385 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	SSQ1	Q05931	657 aa	Predicted RBP	4.02	□□□□□ -1.77
CCS1	YMR038C	GRE1	Q08969	168 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	YDL109C	Q12103	647 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	YOR214C	Q12282	236 aa		4.02	□□□□□ -1.77
CCS1	YMR038C	REP1	P03871	373 aa		4.01	□□□□□ -1.77
CCS1	YMR038C	VMA16	P23968	213 aa		4.01	□□□□□ -1.77
CCS1	YMR038C	ITR1	P30605	584 aa		4.01	□□□□□ -1.77
CCS1	YMR038C	MRE11	P32829	692 aa		4.01	□□□□□ -1.77
CCS1	YMR038C	MDL1	P33310	695 aa		4.01	□□□□□ -1.77
CCS1	YMR038C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
CCS1	YMR038C	MOB2	P43563	287 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms