RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C LOH1P47055 219 aa1.91□□□□□ -2.1
ATG38YLR211C PXR1P53335 271 aaPredicted RBP1.91□□□□□ -2.1
ATG38YLR211C SPP2Q02521 185 aa1.91□□□□□ -2.1
ATG38YLR211C COX20Q04935 205 aa1.91□□□□□ -2.1
ATG38YLR211C CTS2Q06350 511 aa1.91□□□□□ -2.1
ATG38YLR211C PBP4Q07362 185 aaKnown RBP1.91□□□□□ -2.1
ATG38YLR211C TFC7Q12415 435 aa1.91□□□□□ -2.1
ATG38YLR211C POL30P15873 258 aaKnown RBP1.9□□□□□ -2.11
ATG38YLR211C YSR3P23501 404 aa1.9□□□□□ -2.11
ATG38YLR211C RPL5P26321 297 aaKnown RBP1.9□□□□□ -2.11
ATG38YLR211C CWP1P28319 239 aa1.9□□□□□ -2.11
ATG38YLR211C ITR2P30606 609 aa1.9□□□□□ -2.11
ATG38YLR211C YKT6P36015 200 aaKnown RBP1.9□□□□□ -2.11
ATG38YLR211C YKR032WP36127 104 aa1.9□□□□□ -2.11
ATG38YLR211C PET8P38921 284 aa1.9□□□□□ -2.11
ATG38YLR211C TAF6P53040 516 aa1.9□□□□□ -2.11
ATG38YLR211C TIM21P53220 239 aa1.9□□□□□ -2.11
ATG38YLR211C YNL040WP53960 456 aaPredicted RBP1.9□□□□□ -2.11
ATG38YLR211C PET117Q02771 107 aa1.9□□□□□ -2.11
ATG38YLR211C RVB1Q03940 463 aaKnown RBP1.9□□□□□ -2.11
ATG38YLR211C BOP2Q06150 570 aa1.9□□□□□ -2.11
ATG38YLR211C BCP1Q06338 283 aa1.9□□□□□ -2.11
ATG38YLR211C GPN3Q06543 272 aa1.9□□□□□ -2.11
ATG38YLR211C MRX9Q07349 420 aaKnown RBP1.9□□□□□ -2.11
ATG38YLR211C ERP3Q12403 225 aa1.9□□□□□ -2.11
ATG38YLR211C GIS3Q12418 502 aa1.9□□□□□ -2.11
ATG38YLR211C PRE7P23724 241 aaKnown RBP1.89□□□□□ -2.11
ATG38YLR211C SUA5P32579 426 aa1.89□□□□□ -2.11
ATG38YLR211C KTI12P34253 313 aaKnown RBP1.89□□□□□ -2.11
ATG38YLR211C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
ATG38YLR211C SWD2P36104 329 aaPredicted RBP1.89□□□□□ -2.11
ATG38YLR211C HIS2P38635 335 aa1.89□□□□□ -2.11
ATG38YLR211C INA22P40576 216 aa1.89□□□□□ -2.11
ATG38YLR211C ECO1P43605 281 aa1.89□□□□□ -2.11
ATG38YLR211C BUD13P46947 266 aaPredicted RBP1.89□□□□□ -2.11
ATG38YLR211C BIO4P53630 237 aa1.89□□□□□ -2.11
ATG38YLR211C RDL2Q08742 149 aaKnown RBP1.89□□□□□ -2.11
ATG38YLR211C FEX1Q08913 375 aa1.89□□□□□ -2.11
ATG38YLR211C FEX2Q08991 375 aa1.89□□□□□ -2.11
ATG38YLR211C SIA1Q12212 622 aa1.89□□□□□ -2.11
ATG38YLR211C YOR029WQ12243 111 aa1.89□□□□□ -2.11
ATG38YLR211C MED4Q12343 284 aa1.89□□□□□ -2.11
ATG38YLR211C IES3Q12345 250 aa1.89□□□□□ -2.11
ATG38YLR211C SSK22P25390 1331 aaPredicted RBP1.89□□□□□ -2.11
ATG38YLR211C SAC3P46674 1301 aa1.89□□□□□ -2.11
ATG38YLR211C BEM2P39960 2167 aaKnown RBP1.88□□□□□ -2.11
ATG38YLR211C MSF1P08425 469 aa1.88□□□□□ -2.11
ATG38YLR211C FRS2P15625 503 aaKnown RBP1.88□□□□□ -2.11
ATG38YLR211C SNF6P18888 332 aa1.88□□□□□ -2.11
ATG38YLR211C YCR016WP25617 290 aaKnown RBP1.88□□□□□ -2.11
ATG38YLR211C ZRT1P32804 376 aa1.88□□□□□ -2.11
ATG38YLR211C YBL081WP38180 368 aaKnown RBP1.88□□□□□ -2.11
ATG38YLR211C TCD1P38756 429 aa1.88□□□□□ -2.11
ATG38YLR211C BIG1P38813 335 aa1.88□□□□□ -2.11
ATG38YLR211C PET100P38958 111 aa1.88□□□□□ -2.11
ATG38YLR211C PRM9P39551 298 aa1.88□□□□□ -2.11
ATG38YLR211C YER085CP40058 173 aa1.88□□□□□ -2.11
ATG38YLR211C RTR1P40084 226 aaPredicted RBP1.88□□□□□ -2.11
ATG38YLR211C SHQ1P40486 507 aaPredicted RBP1.88□□□□□ -2.11
ATG38YLR211C MNT4P53745 580 aa1.88□□□□□ -2.11
ATG38YLR211C HCH1P53834 153 aa1.88□□□□□ -2.11
ATG38YLR211C UBX2Q04228 584 aa1.88□□□□□ -2.11
ATG38YLR211C YPR172WQ06608 200 aa1.88□□□□□ -2.11
ATG38YLR211C PRM4Q12498 284 aa1.88□□□□□ -2.11
ATG38YLR211C COX2P00410 251 aa1.87□□□□□ -2.11
ATG38YLR211C CDC36P06100 191 aaPredicted RBP1.87□□□□□ -2.11
ATG38YLR211C RAD3P06839 778 aa1.87□□□□□ -2.11
ATG38YLR211C RPB4P20433 221 aaPredicted RBP1.87□□□□□ -2.11
ATG38YLR211C BMH2P34730 273 aaKnown RBP1.87□□□□□ -2.11
ATG38YLR211C ATG12P38316 186 aa1.87□□□□□ -2.11
ATG38YLR211C AGP3P43548 558 aa1.87□□□□□ -2.11
ATG38YLR211C MRX5P47007 382 aa1.87□□□□□ -2.11
ATG38YLR211C COX16P47081 118 aa1.87□□□□□ -2.11
ATG38YLR211C KEL2P50090 882 aa1.87□□□□□ -2.11
ATG38YLR211C UFD1P53044 361 aa1.87□□□□□ -2.11
ATG38YLR211C OKP1P53298 406 aa1.87□□□□□ -2.11
ATG38YLR211C YNR066CP53752 436 aa1.87□□□□□ -2.11
ATG38YLR211C YMR209CQ03648 457 aa1.87□□□□□ -2.11
ATG38YLR211C MYO5Q04439 1219 aaKnown RBP1.87□□□□□ -2.11
ATG38YLR211C YDR114CQ04597 100 aa1.87□□□□□ -2.11
ATG38YLR211C APC9Q12107 265 aa1.87□□□□□ -2.11
ATG38YLR211C POM33Q12164 279 aa1.87□□□□□ -2.11
ATG38YLR211C ADF1Q2V2Q1 113 aa1.87□□□□□ -2.11
ATG38YLR211C MATALPHA1P0CY06 175 aa1.86□□□□□ -2.11
ATG38YLR211C HMLALPHA1P0CY07 175 aa1.86□□□□□ -2.11
ATG38YLR211C MER1P16523 270 aa1.86□□□□□ -2.11
ATG38YLR211C VPS1P21576 704 aaKnown RBP1.86□□□□□ -2.11
ATG38YLR211C VPS3P23643 1011 aa1.86□□□□□ -2.11
ATG38YLR211C RBK1P25332 333 aa1.86□□□□□ -2.11
ATG38YLR211C RSA4P25382 515 aaKnown RBP1.86□□□□□ -2.11
ATG38YLR211C ACB1P31787 87 aa1.86□□□□□ -2.11
ATG38YLR211C KRE6P32486 720 aa1.86□□□□□ -2.11
ATG38YLR211C GCG1P32656 232 aaKnown RBP1.86□□□□□ -2.11
ATG38YLR211C COA1P40452 197 aa1.86□□□□□ -2.11
ATG38YLR211C FMC1P40491 155 aa1.86□□□□□ -2.11
ATG38YLR211C MSS2P40990 351 aa1.86□□□□□ -2.11
ATG38YLR211C GCN20P43535 752 aaKnown RBP1.86□□□□□ -2.11
ATG38YLR211C KAP114P53067 1004 aa1.86□□□□□ -2.11
ATG38YLR211C IRC4Q03036 179 aa1.86□□□□□ -2.11
ATG38YLR211C SRL4Q03085 281 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms