RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	CDC6	P09119	513 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	IDP1	P21954	428 aa	Known RBP	3.17	□□□□□ -1.9
PEX1	YKL197C	PPZ1	P26570	692 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	GAC1	P28006	793 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	ARP2	P32381	391 aa	Known RBP	3.17	□□□□□ -1.9
PEX1	YKL197C	YKL071W	P36086	256 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	FLR1	P38124	548 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	ALP1	P38971	573 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	SPG5	P42933	373 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	AIM23	P47015	356 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	MNN10	P50108	393 aa	Known RBP	3.17	□□□□□ -1.9
PEX1	YKL197C	GTF1	P53260	183 aa	Predicted RBP	3.17	□□□□□ -1.9
PEX1	YKL197C	SED5	Q01590	340 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	TRM13	Q12383	476 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	TRM11	Q12463	433 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	YCR075W-A	Q3E830	75 aa		3.17	□□□□□ -1.9
PEX1	YKL197C	HRP1	Q99383	534 aa	Known RBP	3.17	□□□□□ -1.9
PEX1	YKL197C	PHO2	P07269	559 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	RPL3	P14126	387 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	STE18	P18852	110 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
PEX1	YKL197C	YCR015C	P25616	317 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	TRM7	P38238	310 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	TOS1	P38288	455 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	YPT31	P38555	223 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	YIL108W	P40483	696 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	GAT1	P43574	510 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	ADO1	P47143	340 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	NIF3	P53081	288 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	YPL067C	Q02754	198 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	YPL113C	Q02961	396 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	CTL1	Q03220	320 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	YDR278C	Q05612	105 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	OXR1	Q08952	273 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	AFT2	Q08957	416 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	YOR283W	Q12040	230 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	KCS1	Q12494	1050 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	SLO1	Q3E784	85 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	BCY1	P07278	416 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	RPS4A	P0CX35	261 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	RPS4B	P0CX36	261 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	COQ3	P27680	312 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	SYN8	P31377	255 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	SSS1	P35179	80 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	COS9	P36034	407 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	YPC1	P38298	316 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	VBA2	P38358	474 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	PHO90	P39535	881 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	SMX2	P40204	77 aa	Known RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	DPB11	P47027	764 aa	Predicted RBP	3.16	□□□□□ -1.9
PEX1	YKL197C	SNN1	P48232	102 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	HOF1	Q05080	669 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	EST2	Q06163	884 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	THI21	Q08975	551 aa		3.16	□□□□□ -1.9
PEX1	YKL197C	CPR1	P14832	162 aa	Known RBP	3.15	□□□□□ -1.9
PEX1	YKL197C	THI80	P35202	319 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	GMH1	P36125	273 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	RRN10	P38204	145 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	MIP6	P38760	659 aa	Known RBP	3.15	□□□□□ -1.9
PEX1	YKL197C	PHO23	P50947	330 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	EXG2	P52911	562 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	RMD9	P53140	646 aa	Known RBP	3.15	□□□□□ -1.9
PEX1	YKL197C	YDR366C	P87287	132 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	RPC11	Q04307	110 aa	Predicted RBP	3.15	□□□□□ -1.9
PEX1	YKL197C	GAS2	Q06135	555 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	ECM30	Q06673	1274 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	ASR1	Q06834	288 aa		3.15	□□□□□ -1.9
PEX1	YKL197C	LPX1	Q12405	387 aa	Known RBP	3.15	□□□□□ -1.9
PEX1	YKL197C	FAS2	P19097	1887 aa	Known RBP	3.15	□□□□□ -1.9
PEX1	YKL197C	BET2	P20133	325 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	YCR023C	P25351	611 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	NFS1	P25374	497 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	CDC50	P25656	391 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	RML2	P32611	393 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	RAD23	P32628	398 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	TOA2	P32774	122 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	KTI12	P34253	313 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	MTC4	P38335	694 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	GLR1	P41921	483 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	RPN11	P43588	306 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	INN1	P53901	409 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	AIM36	Q03798	255 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	CAB5	Q03941	241 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	APC4	Q04601	652 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	DIC1	Q06143	298 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	THI20	Q08224	551 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	YPL260W	Q08977	551 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	SPC3	Q12133	184 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	RMD5	Q12508	421 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	CAR1	P00812	333 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	RPL24B	P24000	155 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
PEX1	YKL197C	RPT3	P33298	428 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	RER2	P35196	286 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	HES1	P35843	434 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	YKR041W	P36134	250 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	PRS4	P38063	326 aa	Predicted RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	TRM9	P49957	279 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	AIF1	P52923	378 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	MSO1	P53604	210 aa	Known RBP	3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms