RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	JEN1	P36035	616 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	UTP30	P36144	274 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	YHR210C	P38893	341 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	NAS2	P40555	220 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	HXT9	P40885	567 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	PMT6	P42934	759 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	IDS2	P46958	469 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	SFH5	P47008	294 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	MDV1	P47025	714 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	PMT5	P52867	743 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	DOC1	P53068	250 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	YGR012W	P53206	393 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	VOA1	P53262	265 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	LSM7	P53905	115 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	HXT11	P54862	567 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	MFB1	Q04922	465 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	PAL1	Q05518	499 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	RGC1	Q06108	1083 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	RRP9	Q06506	573 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	TSR2	Q06672	205 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	FMP40	Q08968	688 aa	Predicted RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	YDL109C	Q12103	647 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	MCP1	Q12106	302 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	SCM3	Q12334	223 aa		4.57	□□□□□ -1.68
KTI12	YKL110C	ACC1	Q00955	2233 aa	Known RBP	4.57	□□□□□ -1.68
KTI12	YKL110C	YSF3	P0C074	85 aa	Predicted RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	NCP1	P16603	691 aa	Known RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	CPR2	P23285	205 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	PUT3	P25502	979 aa	Predicted RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	PBN1	P25580	416 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	ERG24	P32462	438 aa	Known RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	HYM1	P32464	399 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	VPS17	P32913	551 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
KTI12	YKL110C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
KTI12	YKL110C	YKL071W	P36086	256 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	MRPL15	P36523	253 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	PEX32	P38292	413 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	MTC4	P38335	694 aa	Known RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
KTI12	YKL110C	PHO90	P39535	881 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	QRI1	P43123	477 aa	Known RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	NRM1	P53718	249 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	SNP1	Q00916	300 aa	Predicted RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	NGL2	Q03264	515 aa	Known RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	TDA1	Q03533	586 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	EKI1	Q03764	534 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	ASR1	Q06834	288 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	YOR378W	Q08902	515 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	HSP42	Q12329	375 aa		4.56	□□□□□ -1.68
KTI12	YKL110C	PRP46	Q12417	451 aa	Predicted RBP	4.56	□□□□□ -1.68
KTI12	YKL110C	OPI3	P05375	206 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	MRP1	P10662	321 aa	Known RBP	4.55	□□□□□ -1.68
KTI12	YKL110C	HMG1	P12683	1054 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	STE12	P13574	688 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	STF2	P16965	84 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	SAR1	P20606	190 aa	Known RBP	4.55	□□□□□ -1.68
KTI12	YKL110C	ERG9	P29704	444 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	THI4	P32318	326 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	PAU2	P32612	120 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	EMP70	P32802	667 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	NIC96	P34077	839 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	MTH1	P35198	433 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	GPX1	P36014	167 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	CHK1	P38147	527 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	IFA38	P38286	347 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	HTD2	P38790	280 aa	Known RBP	4.55	□□□□□ -1.68
KTI12	YKL110C	MDE1	P47095	244 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	YJR141W	P47172	347 aa	Predicted RBP	4.55	□□□□□ -1.68
KTI12	YKL110C	LYS20	P48570	428 aa	Known RBP	4.55	□□□□□ -1.68
KTI12	YKL110C	MPP6	P53725	186 aa	Predicted RBP	4.55	□□□□□ -1.68
KTI12	YKL110C	BUD25	P85052	153 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	YMR210W	Q03649	449 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	SPC19	Q03954	165 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	SNX41	Q04053	625 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	SEI1	Q06058	285 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	AIM6	Q07716	390 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	LYS21	Q12122	440 aa	Known RBP	4.55	□□□□□ -1.68
KTI12	YKL110C	INP53	Q12271	1107 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	FRE7	Q12333	620 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	YOR343C	Q12484	108 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	SFG1	Q12507	346 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	SET6	Q12529	373 aa		4.55	□□□□□ -1.68
KTI12	YKL110C	ADK1	P07170	222 aa	Known RBP	4.54	□□□□□ -1.68
KTI12	YKL110C	COX9	P07255	59 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	SPS2	P08459	502 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	YGL041W-A	P0C5N3	154 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	PDA1	P16387	420 aa	Known RBP	4.54	□□□□□ -1.68
KTI12	YKL110C	GLK1	P17709	500 aa	Known RBP	4.54	□□□□□ -1.68
KTI12	YKL110C	YCP4	P25349	247 aa	Known RBP	4.54	□□□□□ -1.68
KTI12	YKL110C	ATS1	P31386	333 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	TRS65	P32893	560 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	MSN4	P33749	630 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	YBR242W	P38331	238 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	VBA2	P38358	474 aa	Known RBP	4.54	□□□□□ -1.68
KTI12	YKL110C	YHR180W	P38868	163 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	PIC2	P40035	300 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	YIL060W	P40519	144 aa		4.54	□□□□□ -1.68
KTI12	YKL110C	DPB11	P47027	764 aa	Predicted RBP	4.54	□□□□□ -1.68
KTI12	YKL110C	BRR6	P53062	197 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms