RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W RFT1P38206 574 aaPredicted RBP3.8□□□□□ -1.8
TFA1YKL028W FIG1P38224 298 aa3.8□□□□□ -1.8
TFA1YKL028W YBR096WP38256 230 aa3.8□□□□□ -1.8
TFA1YKL028W MET30P39014 640 aa3.8□□□□□ -1.8
TFA1YKL028W YKE4P40544 346 aa3.8□□□□□ -1.8
TFA1YKL028W CFD1P40558 293 aa3.8□□□□□ -1.8
TFA1YKL028W CIN2P46670 268 aa3.8□□□□□ -1.8
TFA1YKL028W AIM23P47015 356 aa3.8□□□□□ -1.8
TFA1YKL028W LSM1P47017 172 aaKnown RBP3.8□□□□□ -1.8
TFA1YKL028W MIG2P53035 382 aa3.8□□□□□ -1.8
TFA1YKL028W NSA1P53136 463 aaPredicted RBP3.8□□□□□ -1.8
TFA1YKL028W PIR3Q03180 325 aa3.8□□□□□ -1.8
TFA1YKL028W YMR166CQ03829 368 aa3.8□□□□□ -1.8
TFA1YKL028W TAF9Q05027 157 aa3.8□□□□□ -1.8
TFA1YKL028W MRX9Q07349 420 aaKnown RBP3.8□□□□□ -1.8
TFA1YKL028W ESA1Q08649 445 aa3.8□□□□□ -1.8
TFA1YKL028W YOR114WQ12219 294 aa3.8□□□□□ -1.8
TFA1YKL028W CSR2Q12734 1121 aa3.8□□□□□ -1.8
TFA1YKL028W STH1P32597 1359 aa3.8□□□□□ -1.8
TFA1YKL028W SNA3P14359 133 aa3.79□□□□□ -1.8
TFA1YKL028W TPS2P31688 896 aaKnown RBP3.79□□□□□ -1.8
TFA1YKL028W AGA1P32323 725 aa3.79□□□□□ -1.8
TFA1YKL028W SHG1P38337 142 aa3.79□□□□□ -1.8
TFA1YKL028W MTC6P38849 526 aa3.79□□□□□ -1.8
TFA1YKL028W AZF1P41696 914 aa3.79□□□□□ -1.8
TFA1YKL028W GAB1P41733 394 aa3.79□□□□□ -1.8
TFA1YKL028W IKS1P47042 667 aa3.79□□□□□ -1.8
TFA1YKL028W YPS5P53057 165 aa3.79□□□□□ -1.8
TFA1YKL028W TPN1P53099 579 aa3.79□□□□□ -1.8
TFA1YKL028W PEX12Q04370 399 aa3.79□□□□□ -1.8
TFA1YKL028W SPC2Q04969 178 aa3.79□□□□□ -1.8
TFA1YKL028W DPP1Q05521 289 aa3.79□□□□□ -1.8
TFA1YKL028W PEX30Q06169 523 aa3.79□□□□□ -1.8
TFA1YKL028W DTD1Q07648 150 aaKnown RBP3.79□□□□□ -1.8
TFA1YKL028W RSA1Q08932 381 aa3.79□□□□□ -1.8
TFA1YKL028W YDL109CQ12103 647 aa3.79□□□□□ -1.8
TFA1YKL028W PIS1P06197 220 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W SPT3P06844 337 aa3.78□□□□□ -1.8
TFA1YKL028W BCY1P07278 416 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W CHA1P25379 360 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W KTI12P34253 313 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W MIX23P38162 196 aa3.78□□□□□ -1.8
TFA1YKL028W POP7P38291 140 aa3.78□□□□□ -1.8
TFA1YKL028W VAB2P40003 282 aa3.78□□□□□ -1.8
TFA1YKL028W OST1P41543 476 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W SNO3P43544 222 aa3.78□□□□□ -1.8
TFA1YKL028W SWS2P53937 143 aa3.78□□□□□ -1.8
TFA1YKL028W DIG1Q03063 452 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W RSC9Q03124 581 aa3.78□□□□□ -1.8
TFA1YKL028W SEC10Q06245 871 aa3.78□□□□□ -1.8
TFA1YKL028W RRS1Q08746 203 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W WTM1Q12363 437 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W TFC7Q12415 435 aa3.78□□□□□ -1.8
TFA1YKL028W EAF3Q12432 401 aa3.78□□□□□ -1.8
TFA1YKL028W YPL119C-AQ3E751 87 aa3.78□□□□□ -1.8
TFA1YKL028W HEM4P06174 275 aa3.78□□□□□ -1.8
TFA1YKL028W PET494P07390 489 aaPredicted RBP3.78□□□□□ -1.8
TFA1YKL028W RPL42AP0CX27 106 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W RPL42BP0CX28 106 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W RPL23AP0CX41 137 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W RPL23BP0CX42 137 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W TRR1P29509 319 aaKnown RBP3.78□□□□□ -1.8
TFA1YKL028W ANR2P36090 516 aaPredicted RBP3.78□□□□□ -1.8
TFA1YKL028W YCR087C-AP37263 153 aa3.78□□□□□ -1.8
TFA1YKL028W SCO2P38072 301 aa3.78□□□□□ -1.8
TFA1YKL028W IRC18P47056 224 aa3.78□□□□□ -1.8
TFA1YKL028W TRM9P49957 279 aa3.78□□□□□ -1.8
TFA1YKL028W IBD2P53892 351 aa3.78□□□□□ -1.8
TFA1YKL028W SUR7P54003 302 aa3.78□□□□□ -1.8
TFA1YKL028W YLR460CP54007 376 aa3.78□□□□□ -1.8
TFA1YKL028W YLR152CP54072 576 aa3.78□□□□□ -1.8
TFA1YKL028W TDA1Q03533 586 aa3.78□□□□□ -1.8
TFA1YKL028W GMC1Q04399 608 aa3.78□□□□□ -1.8
TFA1YKL028W YPR098CQ06089 161 aa3.78□□□□□ -1.8
TFA1YKL028W HEM25Q07534 307 aa3.78□□□□□ -1.8
TFA1YKL028W FOL3Q12676 427 aaPredicted RBP3.78□□□□□ -1.8
TFA1YKL028W SIR4P11978 1358 aa3.77□□□□□ -1.81
TFA1YKL028W PUT1P09368 476 aa3.77□□□□□ -1.81
TFA1YKL028W IFM1P25038 676 aa3.77□□□□□ -1.81
TFA1YKL028W ALK2P32789 676 aaPredicted RBP3.77□□□□□ -1.81
TFA1YKL028W YOX1P34161 385 aa3.77□□□□□ -1.81
TFA1YKL028W DBP7P36120 742 aaKnown RBP3.77□□□□□ -1.81
TFA1YKL028W PET8P38921 284 aa3.77□□□□□ -1.81
TFA1YKL028W LCB3P47013 409 aa3.77□□□□□ -1.81
TFA1YKL028W OST3P48439 350 aa3.77□□□□□ -1.81
TFA1YKL028W NBP35P52920 328 aa3.77□□□□□ -1.81
TFA1YKL028W MMS2P53152 137 aa3.77□□□□□ -1.81
TFA1YKL028W GOR1P53839 350 aa3.77□□□□□ -1.81
TFA1YKL028W FYV6P53913 173 aa3.77□□□□□ -1.81
TFA1YKL028W RHO3Q00245 231 aaKnown RBP3.77□□□□□ -1.81
TFA1YKL028W PRP38Q00723 242 aaPredicted RBP3.77□□□□□ -1.81
TFA1YKL028W SNO1Q03144 224 aa3.77□□□□□ -1.81
TFA1YKL028W YMR010WQ03687 405 aa3.77□□□□□ -1.81
TFA1YKL028W YDR415CQ04033 374 aaPredicted RBP3.77□□□□□ -1.81
TFA1YKL028W YMR254CQ04838 102 aa3.77□□□□□ -1.81
TFA1YKL028W NNT1Q05874 261 aa3.77□□□□□ -1.81
TFA1YKL028W ORM2Q06144 216 aa3.77□□□□□ -1.81
TFA1YKL028W YDL114WQ07530 308 aa3.77□□□□□ -1.81
TFA1YKL028W YNG1Q08465 219 aa3.77□□□□□ -1.81
TFA1YKL028W YGK3Q12222 375 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms