RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W HTB1P02293 131 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W HTB2P02294 131 aa1.06□□□□□ -2.24
APL1YJR005W CDC33P07260 213 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W LPD1P09624 499 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W RPL27AP0C2H6 136 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W RPL27BP0C2H7 136 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W EST1P17214 699 aaPredicted RBP1.06□□□□□ -2.24
APL1YJR005W COQ1P18900 473 aa1.06□□□□□ -2.24
APL1YJR005W YCK1P23291 538 aa1.06□□□□□ -2.24
APL1YJR005W PRE8P23639 250 aa1.06□□□□□ -2.24
APL1YJR005W MIR1P23641 311 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W PRE7P23724 241 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W MEK1P24719 497 aaPredicted RBP1.06□□□□□ -2.24
APL1YJR005W YIH1P25637 258 aa1.06□□□□□ -2.24
APL1YJR005W VMA5P31412 392 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W SPT14P32363 452 aa1.06□□□□□ -2.24
APL1YJR005W HYM1P32464 399 aa1.06□□□□□ -2.24
APL1YJR005W UGX2P32772 223 aa1.06□□□□□ -2.24
APL1YJR005W PRX1P34227 261 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W AST1P35183 429 aa1.06□□□□□ -2.24
APL1YJR005W KKQ8P36004 724 aa1.06□□□□□ -2.24
APL1YJR005W DOA1P36037 715 aa1.06□□□□□ -2.24
APL1YJR005W ARA1P38115 344 aa1.06□□□□□ -2.24
APL1YJR005W BNA4P38169 460 aa1.06□□□□□ -2.24
APL1YJR005W DER1P38307 211 aa1.06□□□□□ -2.24
APL1YJR005W COS8P38723 381 aa1.06□□□□□ -2.24
APL1YJR005W MAM33P40513 266 aa1.06□□□□□ -2.24
APL1YJR005W YGR210CP42942 411 aa1.06□□□□□ -2.24
APL1YJR005W HOC1P47124 396 aa1.06□□□□□ -2.24
APL1YJR005W YJR149WP47177 404 aa1.06□□□□□ -2.24
APL1YJR005W PHB2P50085 310 aa1.06□□□□□ -2.24
APL1YJR005W YGL185CP53100 379 aa1.06□□□□□ -2.24
APL1YJR005W PNC1P53184 216 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W GET1P53192 235 aa1.06□□□□□ -2.24
APL1YJR005W YGR026WP53217 278 aa1.06□□□□□ -2.24
APL1YJR005W FMP48P53233 369 aa1.06□□□□□ -2.24
APL1YJR005W OGG1P53397 376 aaPredicted RBP1.06□□□□□ -2.24
APL1YJR005W YNR066CP53752 436 aa1.06□□□□□ -2.24
APL1YJR005W YNL143CP53908 130 aa1.06□□□□□ -2.24
APL1YJR005W MTQ1P53944 314 aa1.06□□□□□ -2.24
APL1YJR005W YNL040WP53960 456 aaPredicted RBP1.06□□□□□ -2.24
APL1YJR005W PRM15Q03262 622 aa1.06□□□□□ -2.24
APL1YJR005W OST6Q03723 332 aa1.06□□□□□ -2.24
APL1YJR005W TRM82Q03774 444 aa1.06□□□□□ -2.24
APL1YJR005W YDR387CQ04162 555 aa1.06□□□□□ -2.24
APL1YJR005W MYO5Q04439 1219 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W PEX30Q06169 523 aa1.06□□□□□ -2.24
APL1YJR005W RIF2Q06208 395 aa1.06□□□□□ -2.24
APL1YJR005W BER1Q06688 274 aaKnown RBP1.06□□□□□ -2.24
APL1YJR005W PAM18Q07914 168 aa1.06□□□□□ -2.24
APL1YJR005W HRD1Q08109 551 aa1.06□□□□□ -2.24
APL1YJR005W YNG1Q08465 219 aa1.06□□□□□ -2.24
APL1YJR005W SCP1Q08873 200 aa1.06□□□□□ -2.24
APL1YJR005W CTI6Q08923 506 aa1.06□□□□□ -2.24
APL1YJR005W YPL199CQ08954 240 aa1.06□□□□□ -2.24
APL1YJR005W FEX2Q08991 375 aa1.06□□□□□ -2.24
APL1YJR005W APC9Q12107 265 aa1.06□□□□□ -2.24
APL1YJR005W NMD4Q12129 218 aa1.06□□□□□ -2.24
APL1YJR005W DGK1Q12382 290 aa1.06□□□□□ -2.24
APL1YJR005W MRX4Q12467 430 aa1.06□□□□□ -2.24
APL1YJR005W YDL012CQ12489 107 aa1.06□□□□□ -2.24
APL1YJR005W FMP16Q12497 93 aa1.06□□□□□ -2.24
APL1YJR005W PRM4Q12498 284 aa1.06□□□□□ -2.24
APL1YJR005W SFG1Q12507 346 aa1.06□□□□□ -2.24
APL1YJR005W AFI1Q99222 893 aa1.06□□□□□ -2.24
APL1YJR005W PET20Q99373 253 aa1.06□□□□□ -2.24
APL1YJR005W IRC20Q06554 1556 aa1.05□□□□□ -2.24
APL1YJR005W NUP170P38181 1502 aa1.05□□□□□ -2.24
APL1YJR005W GEA2P39993 1459 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W MDS3P53094 1487 aa1.05□□□□□ -2.24
APL1YJR005W SCC2Q04002 1493 aa1.05□□□□□ -2.24
APL1YJR005W KRE5P22023 1365 aa1.05□□□□□ -2.24
APL1YJR005W SEC7P11075 2009 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W TPI1P00942 248 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W RPL24AP04449 155 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W SNA3P14359 133 aa1.05□□□□□ -2.24
APL1YJR005W UGA1P17649 471 aa1.05□□□□□ -2.24
APL1YJR005W ERD2P18414 219 aa1.05□□□□□ -2.24
APL1YJR005W ART10P18634 518 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W PRE1P22141 198 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W RPS1BP23248 255 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W DAL2P25335 343 aa1.05□□□□□ -2.24
APL1YJR005W CHA1P25379 360 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W YCR051WP25631 222 aa1.05□□□□□ -2.24
APL1YJR005W AHC2P25649 128 aa1.05□□□□□ -2.24
APL1YJR005W CWP1P28319 239 aa1.05□□□□□ -2.24
APL1YJR005W RAD14P28519 371 aa1.05□□□□□ -2.24
APL1YJR005W ERG9P29704 444 aa1.05□□□□□ -2.24
APL1YJR005W ARO7P32178 256 aa1.05□□□□□ -2.24
APL1YJR005W RNP1P32385 249 aa1.05□□□□□ -2.24
APL1YJR005W MDH3P32419 343 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
APL1YJR005W SPS19P32573 292 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W CDC13P32797 924 aaKnown RBP1.05□□□□□ -2.24
APL1YJR005W RPC25P35718 212 aa1.05□□□□□ -2.24
APL1YJR005W PTK1P36002 662 aaPredicted RBP1.05□□□□□ -2.24
APL1YJR005W MCH2P36032 473 aa1.05□□□□□ -2.24
APL1YJR005W FRE2P36033 711 aa1.05□□□□□ -2.24
APL1YJR005W JEN1P36035 616 aa1.05□□□□□ -2.24
APL1YJR005W MRPL15P36523 253 aa1.05□□□□□ -2.24
APL1YJR005W CBP4P37267 147 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms