RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeastyeast

Gene RPL39, Length 156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL39YJL189W GDI1P39958 451 aaKnown RBP0.2□□□□□ -2.38
RPL39YJL189W VAB2P40003 282 aa0.2□□□□□ -2.38
RPL39YJL189W RPE1P46969 238 aa0.2□□□□□ -2.38
RPL39YJL189W YJL118WP47022 219 aa0.2□□□□□ -2.38
RPL39YJL189W YML6P51998 286 aa0.19□□□□□ -2.38
RPL39YJL189W YMR114CQ04471 368 aaKnown RBP0.19□□□□□ -2.38
RPL39YJL189W UTP23Q12339 254 aaKnown RBP0.19□□□□□ -2.38
RPL39YJL189W NOT5Q12514 560 aaPredicted RBP0.19□□□□□ -2.38
RPL39YJL189W VMA5P31412 392 aaKnown RBP0.18□□□□□ -2.38
RPL39YJL189W YER135CP40082 130 aa0.18□□□□□ -2.38
RPL39YJL189W PEP8P40335 379 aa0.18□□□□□ -2.38
RPL39YJL189W IRC4Q03036 179 aa0.18□□□□□ -2.38
RPL39YJL189W BUR2Q05949 395 aa0.18□□□□□ -2.38
RPL39YJL189W ISD11Q6Q560 94 aa0.18□□□□□ -2.38
RPL39YJL189W RAD7P06779 565 aa0.17□□□□□ -2.38
RPL39YJL189W OSM1P21375 501 aaKnown RBP0.17□□□□□ -2.38
RPL39YJL189W COT1P32798 439 aa0.17□□□□□ -2.38
RPL39YJL189W IMP3P32899 183 aaPredicted RBP0.17□□□□□ -2.38
RPL39YJL189W SWE1P32944 819 aa0.17□□□□□ -2.38
RPL39YJL189W MCH2P36032 473 aa0.17□□□□□ -2.38
RPL39YJL189W ECM18Q04623 453 aa0.17□□□□□ -2.38
RPL39YJL189W YEL009C-AA0A023PZF2 135 aa0.16□□□□□ -2.38
RPL39YJL189W ACB1P31787 87 aa0.16□□□□□ -2.38
RPL39YJL189W ADH5P38113 351 aaKnown RBP0.16□□□□□ -2.38
RPL39YJL189W PHO89P38361 574 aa0.16□□□□□ -2.38
RPL39YJL189W SEN34P39707 275 aa0.16□□□□□ -2.38
RPL39YJL189W RPA34P47006 233 aaPredicted RBP0.16□□□□□ -2.38
RPL39YJL189W YGL114WP53134 725 aa0.16□□□□□ -2.38
RPL39YJL189W RVB1Q03940 463 aaKnown RBP0.16□□□□□ -2.38
RPL39YJL189W CAT2P32796 670 aaKnown RBP0.15□□□□□ -2.39
RPL39YJL189W ZRT1P32804 376 aa0.15□□□□□ -2.39
RPL39YJL189W POP8P38208 133 aa0.15□□□□□ -2.39
RPL39YJL189W CIS3P47001 227 aa0.15□□□□□ -2.39
RPL39YJL189W YPT32P51996 222 aaKnown RBP0.15□□□□□ -2.39
RPL39YJL189W YGR168CP53293 376 aa0.15□□□□□ -2.39
RPL39YJL189W CAB5Q03941 241 aa0.15□□□□□ -2.39
RPL39YJL189W IFM1P25038 676 aa0.14□□□□□ -2.39
RPL39YJL189W SNX4P47057 423 aa0.14□□□□□ -2.39
RPL39YJL189W YGR016WP53209 190 aa0.14□□□□□ -2.39
RPL39YJL189W YNL146WP53906 100 aa0.14□□□□□ -2.39
RPL39YJL189W VPS9P54787 451 aa0.14□□□□□ -2.39
RPL39YJL189W TRM44Q02648 567 aaKnown RBP0.14□□□□□ -2.39
RPL39YJL189W TAZ1Q06510 381 aa0.14□□□□□ -2.39
RPL39YJL189W PUT1P09368 476 aa0.13□□□□□ -2.39
RPL39YJL189W ARN2P38724 620 aa0.13□□□□□ -2.39
RPL39YJL189W YHR035WP38769 630 aa0.13□□□□□ -2.39
RPL39YJL189W LRP1P38801 184 aaKnown RBP0.13□□□□□ -2.39
RPL39YJL189W TIF34P40217 347 aaKnown RBP0.13□□□□□ -2.39
RPL39YJL189W SEC28P40509 296 aaKnown RBP0.13□□□□□ -2.39
RPL39YJL189W UBC13P52490 153 aa0.13□□□□□ -2.39
RPL39YJL189W SXM1Q04175 944 aaKnown RBP0.13□□□□□ -2.39
RPL39YJL189W POX1P13711 748 aa0.12□□□□□ -2.39
RPL39YJL189W ERG2P32352 222 aa0.12□□□□□ -2.39
RPL39YJL189W VPH1P32563 840 aaKnown RBP0.12□□□□□ -2.39
RPL39YJL189W SCM4P32564 187 aa0.12□□□□□ -2.39
RPL39YJL189W YKL162CP36052 402 aa0.12□□□□□ -2.39
RPL39YJL189W SHQ1P40486 507 aaPredicted RBP0.12□□□□□ -2.39
RPL39YJL189W RPL37AP49166 88 aaKnown RBP0.12□□□□□ -2.39
RPL39YJL189W COG7P53195 279 aa0.12□□□□□ -2.39
RPL39YJL189W YDR262WQ12331 272 aa0.12□□□□□ -2.39
RPL39YJL189W RPL18AP0CX49 186 aaKnown RBP0.11□□□□□ -2.39
RPL39YJL189W RPL18BP0CX50 186 aaKnown RBP0.11□□□□□ -2.39
RPL39YJL189W SFC1P33303 322 aa0.11□□□□□ -2.39
RPL39YJL189W GDH2P33327 1092 aaKnown RBP0.11□□□□□ -2.39
RPL39YJL189W SKI2P35207 1287 aaKnown RBP RIP-Chip data0.11□□□□□ -2.39not detected
RPL39YJL189W GDT1P38301 280 aaPredicted RBP0.11□□□□□ -2.39
RPL39YJL189W AAH1P53909 347 aa0.11□□□□□ -2.39
RPL39YJL189W SUB1P54000 292 aaKnown RBP0.11□□□□□ -2.39
RPL39YJL189W PEX12Q04370 399 aa0.11□□□□□ -2.39
RPL39YJL189W FPR1P20081 114 aaKnown RBP0.1□□□□□ -2.39
RPL39YJL189W DPB2P24482 689 aaPredicted RBP0.1□□□□□ -2.39
RPL39YJL189W PUP2P32379 260 aa0.1□□□□□ -2.39
RPL39YJL189W YBR219CP38317 127 aa0.1□□□□□ -2.39
RPL39YJL189W FMP41P53889 259 aaKnown RBP0.1□□□□□ -2.39
RPL39YJL189W PBP4Q07362 185 aaKnown RBP0.1□□□□□ -2.39
RPL39YJL189W GEP5Q12393 293 aa0.1□□□□□ -2.39
RPL39YJL189W YER188C-AP0C0V2 99 aa0.09□□□□□ -2.4
RPL39YJL189W YGL010WP25338 174 aa0.09□□□□□ -2.4
RPL39YJL189W BMH1P29311 267 aaKnown RBP0.09□□□□□ -2.4
RPL39YJL189W AEP1P32493 518 aa0.09□□□□□ -2.4
RPL39YJL189W CSG2P35206 410 aa0.09□□□□□ -2.4
RPL39YJL189W GDS1P41913 522 aa0.09□□□□□ -2.4
RPL39YJL189W TAD2P47058 250 aa0.09□□□□□ -2.4
RPL39YJL189W MDM34P53083 459 aa0.09□□□□□ -2.4
RPL39YJL189W OKP1P53298 406 aa0.09□□□□□ -2.4
RPL39YJL189W CSI2Q08054 341 aa0.09□□□□□ -2.4
RPL39YJL189W FRE6Q12473 712 aa0.09□□□□□ -2.4
RPL39YJL189W MHT1Q12525 324 aa0.09□□□□□ -2.4
RPL39YJL189W RPL2AP0CX45 254 aaKnown RBP0.08□□□□□ -2.4
RPL39YJL189W RPL2BP0CX46 254 aaKnown RBP0.08□□□□□ -2.4
RPL39YJL189W YBR220CP38318 560 aa0.08□□□□□ -2.4
RPL39YJL189W SWC4P53201 476 aa0.08□□□□□ -2.4
RPL39YJL189W MZM1Q03429 123 aaPredicted RBP0.08□□□□□ -2.4
RPL39YJL189W DPP1Q05521 289 aa0.08□□□□□ -2.4
RPL39YJL189W YOR114WQ12219 294 aa0.08□□□□□ -2.4
RPL39YJL189W DCN1Q12395 269 aa0.08□□□□□ -2.4
RPL39YJL189W FKS1P38631 1876 aaKnown RBP0.07□□□□□ -2.4
RPL39YJL189W RPL31AP0C2H8 113 aaKnown RBP0.07□□□□□ -2.4
RPL39YJL189W SCL1P21243 252 aaKnown RBP0.07□□□□□ -2.4
RPL39YJL189W DAD2P36162 133 aa0.07□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms