RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C MOB2P43563 287 aa3.12□□□□□ -1.91
VPS53YJL029C FMP33P46998 180 aa3.12□□□□□ -1.91
VPS53YJL029C BUD9P53226 547 aa3.12□□□□□ -1.91
VPS53YJL029C NUP116Q02630 1113 aa3.12□□□□□ -1.91
VPS53YJL029C HFD1Q04458 532 aa3.12□□□□□ -1.91
VPS53YJL029C RNH1Q04740 348 aa3.12□□□□□ -1.91
VPS53YJL029C ATG33Q06485 197 aa3.12□□□□□ -1.91
VPS53YJL029C MIM1Q08176 113 aa3.12□□□□□ -1.91
VPS53YJL029C MCH4Q08268 501 aa3.12□□□□□ -1.91
VPS53YJL029C IZH2Q12442 317 aa3.12□□□□□ -1.91
VPS53YJL029C YAK1P14680 807 aa3.11□□□□□ -1.91
VPS53YJL029C RPA135P22138 1203 aaKnown RBP3.11□□□□□ -1.91
VPS53YJL029C PTP2P29461 750 aa3.11□□□□□ -1.91
VPS53YJL029C GSH1P32477 678 aa3.11□□□□□ -1.91
VPS53YJL029C COS9P36034 407 aa3.11□□□□□ -1.91
VPS53YJL029C ALG14P38242 237 aa3.11□□□□□ -1.91
VPS53YJL029C RPS20P38701 121 aaKnown RBP3.11□□□□□ -1.91
VPS53YJL029C YFL051CP43552 160 aa3.11□□□□□ -1.91
VPS53YJL029C SSY5P47002 699 aa3.11□□□□□ -1.91
VPS53YJL029C SIP18P50263 79 aa3.11□□□□□ -1.91
VPS53YJL029C SYF2P53277 215 aaPredicted RBP3.11□□□□□ -1.91
VPS53YJL029C BNA7Q04066 261 aa3.11□□□□□ -1.91
VPS53YJL029C VCX1Q99385 411 aa3.11□□□□□ -1.91
VPS53YJL029C SIR3P06701 978 aa3.11□□□□□ -1.91
VPS53YJL029C RPL35AP0CX84 120 aaKnown RBP3.11□□□□□ -1.91
VPS53YJL029C RPL35BP0CX85 120 aaKnown RBP3.11□□□□□ -1.91
VPS53YJL029C ATR1P13090 542 aa3.11□□□□□ -1.91
VPS53YJL029C ARO3P14843 370 aaKnown RBP3.11□□□□□ -1.91
VPS53YJL029C ARC19P33204 171 aaKnown RBP3.11□□□□□ -1.91
VPS53YJL029C PDX3P38075 228 aaKnown RBP3.11□□□□□ -1.91
VPS53YJL029C YHL044WP38727 235 aa3.11□□□□□ -1.91
VPS53YJL029C YLF2P38746 405 aa3.11□□□□□ -1.91
VPS53YJL029C CHL4P38907 458 aa3.11□□□□□ -1.91
VPS53YJL029C SNL1P40548 159 aa3.11□□□□□ -1.91
VPS53YJL029C DPB11P47027 764 aaPredicted RBP3.11□□□□□ -1.91
VPS53YJL029C HMS2P47175 358 aa3.11□□□□□ -1.91
VPS53YJL029C COS1P53822 381 aa3.11□□□□□ -1.91
VPS53YJL029C SSY1Q03770 852 aa3.11□□□□□ -1.91
VPS53YJL029C ELP6Q04868 273 aa3.11□□□□□ -1.91
VPS53YJL029C RKM1Q08961 583 aaPredicted RBP3.11□□□□□ -1.91
VPS53YJL029C YPL225WQ08971 146 aaKnown RBP3.11□□□□□ -1.91
VPS53YJL029C SPC3Q12133 184 aa3.11□□□□□ -1.91
VPS53YJL029C YDR215CQ12240 137 aa3.11□□□□□ -1.91
VPS53YJL029C RPL15AP05748 204 aaKnown RBP3.1□□□□□ -1.91
VPS53YJL029C TPK3P05986 398 aa3.1□□□□□ -1.91
VPS53YJL029C SNF4P12904 322 aa3.1□□□□□ -1.91
VPS53YJL029C SPS100P13130 326 aa3.1□□□□□ -1.91
VPS53YJL029C PDA1P16387 420 aaKnown RBP3.1□□□□□ -1.91
VPS53YJL029C COQ2P32378 372 aa3.1□□□□□ -1.91
VPS53YJL029C CLG1P35190 452 aa3.1□□□□□ -1.91
VPS53YJL029C ILM1P47155 203 aa3.1□□□□□ -1.91
VPS53YJL029C VMA10P48836 114 aaKnown RBP3.1□□□□□ -1.91
VPS53YJL029C SHE4P51534 789 aa3.1□□□□□ -1.91
VPS53YJL029C SBH2P52871 88 aa3.1□□□□□ -1.91
VPS53YJL029C YIP5P53108 310 aa3.1□□□□□ -1.91
VPS53YJL029C RPL15BP54780 204 aaPredicted RBP3.1□□□□□ -1.91
VPS53YJL029C YPR196WQ06595 470 aa3.1□□□□□ -1.91
VPS53YJL029C SRL2Q12020 392 aa3.1□□□□□ -1.91
VPS53YJL029C NKP1Q12493 238 aa3.1□□□□□ -1.91
VPS53YJL029C RPL6BP05739 176 aaKnown RBP3.1□□□□□ -1.91
VPS53YJL029C NAM2P11325 894 aa3.1□□□□□ -1.91
VPS53YJL029C DBF20P32328 564 aa3.1□□□□□ -1.91
VPS53YJL029C MDH3P32419 343 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
VPS53YJL029C REC104P33323 182 aa3.1□□□□□ -1.91
VPS53YJL029C SWD1P39706 426 aa3.1□□□□□ -1.91
VPS53YJL029C YER084WP40057 128 aa3.1□□□□□ -1.91
VPS53YJL029C RRG9P40156 214 aa3.1□□□□□ -1.91
VPS53YJL029C ADO1P47143 340 aaKnown RBP3.1□□□□□ -1.91
VPS53YJL029C ABM1P47146 123 aa3.1□□□□□ -1.91
VPS53YJL029C NQM1P53228 333 aaPredicted RBP3.1□□□□□ -1.91
VPS53YJL029C DIG2Q03373 323 aaKnown RBP3.1□□□□□ -1.91
VPS53YJL029C RSM24Q03976 319 aa3.1□□□□□ -1.91
VPS53YJL029C YMR226CQ05016 267 aaKnown RBP3.1□□□□□ -1.91
VPS53YJL029C TAZ1Q06510 381 aa3.1□□□□□ -1.91
VPS53YJL029C YDL114WQ07530 308 aa3.1□□□□□ -1.91
VPS53YJL029C YDL007C-AQ2V2Q0 85 aa3.1□□□□□ -1.91
VPS53YJL029C Q0297Q9ZZV8 51 aa3.1□□□□□ -1.91
VPS53YJL029C ADE8P04161 214 aa3.09□□□□□ -1.91
VPS53YJL029C RPL24AP04449 155 aaKnown RBP3.09□□□□□ -1.91
VPS53YJL029C RPS23AP0CX29 145 aaKnown RBP3.09□□□□□ -1.91
VPS53YJL029C RPS23BP0CX30 145 aa3.09□□□□□ -1.91
VPS53YJL029C ERG4P25340 473 aa3.09□□□□□ -1.91
VPS53YJL029C GIT1P25346 518 aa3.09□□□□□ -1.91
VPS53YJL029C OAC1P32332 324 aa3.09□□□□□ -1.91
VPS53YJL029C SUR1P33300 382 aa3.09□□□□□ -1.91
VPS53YJL029C ECT1P33412 323 aa3.09□□□□□ -1.91
VPS53YJL029C SRP102P36057 244 aaPredicted RBP3.09□□□□□ -1.91
VPS53YJL029C DTR1P38125 572 aa3.09□□□□□ -1.91
VPS53YJL029C GZF3P42944 551 aaKnown RBP3.09□□□□□ -1.91
VPS53YJL029C MNT4P53745 580 aa3.09□□□□□ -1.91
VPS53YJL029C YNL046WP53956 172 aa3.09□□□□□ -1.91
VPS53YJL029C RSM28Q03430 361 aa3.09□□□□□ -1.91
VPS53YJL029C AIM36Q03798 255 aa3.09□□□□□ -1.91
VPS53YJL029C LUC7Q07508 261 aaPredicted RBP3.09□□□□□ -1.91
VPS53YJL029C HRT1Q08273 121 aa3.09□□□□□ -1.91
VPS53YJL029C PCL9Q12477 304 aa3.09□□□□□ -1.91
VPS53YJL029C TIM9O74700 87 aa3.09□□□□□ -1.92
VPS53YJL029C RPC40P07703 335 aaKnown RBP3.09□□□□□ -1.92
VPS53YJL029C MET3P08536 511 aa3.09□□□□□ -1.92
VPS53YJL029C APA2P22108 325 aa3.09□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms