RNA–Protein interactions for RNA: YHR065C

RRP3, Transcript of Protein involved in rRNA processing, yeast

Gene RRP3, Length 1,506 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP3	YHR065C	RRN9	P53437	365 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	PEX25	Q02969	394 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	TDA1	Q03533	586 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	YDR249C	Q03787	373 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	BUR2	Q05949	395 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	GPN3	Q06543	272 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	CYK3	Q07533	885 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	FRE5	Q08908	694 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	RKM1	Q08961	583 aa	Predicted RBP	4.26	□□□□□ -1.73
RRP3	YHR065C	SFG1	Q12507	346 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	SIR2	P06700	562 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	PEP4	P07267	405 aa	Known RBP	4.26	□□□□□ -1.73
RRP3	YHR065C	EXG1	P23776	448 aa	Known RBP	4.26	□□□□□ -1.73
RRP3	YHR065C	SED4	P25365	1065 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	EHD3	P28817	500 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
RRP3	YHR065C	SDS22	P36047	338 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	LEU5	P38702	357 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	PHO90	P39535	881 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	SIT1	P39980	628 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	RTT105	P40063	208 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	SDP1	P40479	209 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	YFR054C	P43622	192 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	IMD3	P50095	523 aa	Known RBP	4.26	□□□□□ -1.73
RRP3	YHR065C	OCA1	P50946	238 aa	Predicted RBP	4.26	□□□□□ -1.73
RRP3	YHR065C	PAU12	P53343	120 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	YKR005C	Q02203	525 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	MDM30	Q05930	598 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	MRPL51	Q06090	140 aa	Predicted RBP	4.26	□□□□□ -1.73
RRP3	YHR065C	TAZ1	Q06510	381 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	RDR1	Q08904	546 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	RCN2	Q12044	265 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	FRE6	Q12473	712 aa		4.26	□□□□□ -1.73
RRP3	YHR065C	IRA2	P19158	3079 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	COX9	P07255	59 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	RIP1	P08067	215 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	RPL40A	P0CH08	128 aa	Known RBP	4.25	□□□□□ -1.73
RRP3	YHR065C	RPL40B	P0CH09	128 aa	Known RBP	4.25	□□□□□ -1.73
RRP3	YHR065C	FUN26	P31381	517 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	DOA4	P32571	926 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	VPS17	P32913	551 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
RRP3	YHR065C	SEF1	P34228	1148 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	ZRT3	P34240	503 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	THI2	P38141	450 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	PAU24	P38155	120 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	YNL208W	P40159	199 aa	Known RBP	4.25	□□□□□ -1.73
RRP3	YHR065C	PKP1	P40530	394 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	POP1	P41812	875 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	PMT6	P42934	759 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	SER2	P42941	309 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	BUL1	P48524	976 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	CWC23	P52868	283 aa	Predicted RBP	4.25	□□□□□ -1.73
RRP3	YHR065C	APM1	Q00776	475 aa	Predicted RBP	4.25	□□□□□ -1.73
RRP3	YHR065C	NUP116	Q02630	1113 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	PFA5	Q03289	374 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	RSM28	Q03430	361 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	CGI121	Q03705	181 aa	Known RBP	4.25	□□□□□ -1.73
RRP3	YHR065C	AIM6	Q07716	390 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	IRC19	Q07843	230 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	YOR376W	Q08900	122 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	BTS1	Q12051	335 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	FRE7	Q12333	620 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	YPR1	Q12458	312 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	YOR343C	Q12484	108 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	SUS1	Q6WNK7	96 aa		4.25	□□□□□ -1.73
RRP3	YHR065C	MRP1	P10662	321 aa	Known RBP	4.24	□□□□□ -1.73
RRP3	YHR065C	RPB8	P20436	146 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	RPA135	P22138	1203 aa	Known RBP	4.24	□□□□□ -1.73
RRP3	YHR065C	SCO1	P23833	295 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	RAD51	P25454	400 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	PUT3	P25502	979 aa	Predicted RBP	4.24	□□□□□ -1.73
RRP3	YHR065C	SPT14	P32363	452 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RRP3	YHR065C	MOH1	P38191	138 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	YHK8	P38776	514 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	IPI1	P38803	334 aa	Predicted RBP	4.24	□□□□□ -1.73
RRP3	YHR065C	PMT5	P52867	743 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	IMO32	P53219	342 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	VOA1	P53262	265 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	RSM10	Q03201	203 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	SCS7	Q03529	384 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	SNX41	Q04053	625 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	PEX10	Q05568	337 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	RGC1	Q06108	1083 aa	Known RBP	4.24	□□□□□ -1.73
RRP3	YHR065C	LUC7	Q07508	261 aa	Predicted RBP	4.24	□□□□□ -1.73
RRP3	YHR065C	HRT1	Q08273	121 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	RRG7	Q08774	242 aa	Predicted RBP	4.24	□□□□□ -1.73
RRP3	YHR065C	BAG7	Q12128	409 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	YRA1	Q12159	226 aa	Known RBP	4.24	□□□□□ -1.73
RRP3	YHR065C	RTN2	Q12443	393 aa		4.24	□□□□□ -1.73
RRP3	YHR065C	BLM10	P43583	2143 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	KIN28	P06242	306 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	TRP4	P07285	380 aa	Predicted RBP	4.23	□□□□□ -1.73
RRP3	YHR065C	YHR214C-D	P0CX93	97 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	ERG8	P24521	451 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	STE50	P25344	346 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	LDB16	P25587	256 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	PTC6	P25646	442 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	AFR1	P33304	620 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms