RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeastyeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDR1YGR100W YPC1P38298 316 aa4.24□□□□□ -1.73
MDR1YGR100W ARP1P38696 384 aa4.24□□□□□ -1.73
MDR1YGR100W YHR035WP38769 630 aa4.24□□□□□ -1.73
MDR1YGR100W RPF1P38805 295 aaKnown RBP4.24□□□□□ -1.73
MDR1YGR100W YHR210CP38893 341 aa4.24□□□□□ -1.73
MDR1YGR100W RRG9P40156 214 aa4.24□□□□□ -1.73
MDR1YGR100W PRE6P40303 254 aaKnown RBP4.24□□□□□ -1.73
MDR1YGR100W TRM9P49957 279 aa4.24□□□□□ -1.73
MDR1YGR100W YGR151CP53287 111 aa4.24□□□□□ -1.73
MDR1YGR100W GTR2P53290 341 aa4.24□□□□□ -1.73
MDR1YGR100W AGE1Q04412 482 aa4.24□□□□□ -1.73
MDR1YGR100W ECM22Q05958 814 aaPredicted RBP4.24□□□□□ -1.73
MDR1YGR100W GUD1Q07729 489 aa4.24□□□□□ -1.73
MDR1YGR100W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
MDR1YGR100W POM33Q12164 279 aa4.24□□□□□ -1.73
MDR1YGR100W SUL2Q12325 893 aa4.24□□□□□ -1.73
MDR1YGR100W SNF8Q12483 233 aa4.24□□□□□ -1.73
MDR1YGR100W RMD5Q12508 421 aa4.24□□□□□ -1.73
MDR1YGR100W SIR2P06700 562 aa4.24□□□□□ -1.73
MDR1YGR100W SRD1P09007 221 aa4.24□□□□□ -1.73
MDR1YGR100W SAM2P19358 384 aaKnown RBP4.24□□□□□ -1.73
MDR1YGR100W ARE1P25628 610 aa4.24□□□□□ -1.73
MDR1YGR100W POT1P27796 417 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
MDR1YGR100W RIM1P32445 135 aaKnown RBP4.24□□□□□ -1.73
MDR1YGR100W NTF2P33331 125 aaKnown RBP4.24□□□□□ -1.73
MDR1YGR100W SHE2P36068 246 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
MDR1YGR100W TRS20P38334 175 aa4.24□□□□□ -1.73
MDR1YGR100W CHS7P38843 316 aa4.24□□□□□ -1.73
MDR1YGR100W FIR1P40020 876 aa4.24□□□□□ -1.73
MDR1YGR100W THI12P42883 340 aa4.24□□□□□ -1.73
MDR1YGR100W PMT6P42934 759 aa4.24□□□□□ -1.73
MDR1YGR100W THI5P43534 340 aa4.24□□□□□ -1.73
MDR1YGR100W TAM41P53230 385 aa4.24□□□□□ -1.73
MDR1YGR100W OAZ1Q02803 292 aa4.24□□□□□ -1.73
MDR1YGR100W RRP45Q05636 305 aaKnown RBP4.24□□□□□ -1.73
MDR1YGR100W PUS5Q06244 254 aa4.24□□□□□ -1.73
MDR1YGR100W THI13Q07748 340 aa4.24□□□□□ -1.73
MDR1YGR100W MCA1Q08601 432 aa4.24□□□□□ -1.73
MDR1YGR100W CSM4Q08955 156 aa4.24□□□□□ -1.73
MDR1YGR100W ATG41Q12048 136 aa4.24□□□□□ -1.73
MDR1YGR100W ATG5Q12380 294 aa4.24□□□□□ -1.73
MDR1YGR100W ISA2Q12425 185 aa4.24□□□□□ -1.73
MDR1YGR100W YGR161W-CQ3E744 92 aa4.24□□□□□ -1.73
MDR1YGR100W RPS25BP0C0T4 108 aaKnown RBP4.24□□□□□ -1.73
MDR1YGR100W YSC83P32792 385 aa4.24□□□□□ -1.73
MDR1YGR100W AIM26P32858 118 aa4.24□□□□□ -1.73
MDR1YGR100W VRP1P37370 817 aa4.24□□□□□ -1.73
MDR1YGR100W SHO1P40073 367 aa4.24□□□□□ -1.73
MDR1YGR100W YER121WP40076 114 aa4.24□□□□□ -1.73
MDR1YGR100W YER158CP40095 573 aa4.24□□□□□ -1.73
MDR1YGR100W FLX1P40464 311 aa4.24□□□□□ -1.73
MDR1YGR100W FET4P40988 552 aa4.24□□□□□ -1.73
MDR1YGR100W YJL171CP46992 396 aa4.24□□□□□ -1.73
MDR1YGR100W YJL163CP46996 555 aa4.24□□□□□ -1.73
MDR1YGR100W NET1P47035 1189 aa4.24□□□□□ -1.73
MDR1YGR100W PHB2P50085 310 aa4.24□□□□□ -1.73
MDR1YGR100W RIB4P50861 169 aaPredicted RBP4.24□□□□□ -1.73
MDR1YGR100W AAT1Q01802 451 aa4.24□□□□□ -1.73
MDR1YGR100W YMR087WQ04299 284 aa4.24□□□□□ -1.73
MDR1YGR100W YML096WQ04489 525 aa4.24□□□□□ -1.73
MDR1YGR100W RPS25AQ3E792 108 aaPredicted RBP4.24□□□□□ -1.73
MDR1YGR100W COX5BP00425 151 aa4.23□□□□□ -1.73
MDR1YGR100W HAP3P13434 144 aa4.23□□□□□ -1.73
MDR1YGR100W APE1P14904 514 aa4.23□□□□□ -1.73
MDR1YGR100W ERS1P17261 260 aa4.23□□□□□ -1.73
MDR1YGR100W RPB5P20434 215 aa4.23□□□□□ -1.73
MDR1YGR100W YIH1P25637 258 aa4.23□□□□□ -1.73
MDR1YGR100W TIP1P27654 210 aaPredicted RBP4.23□□□□□ -1.73
MDR1YGR100W PRP39P39682 629 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W YAL037WP39728 267 aa4.23□□□□□ -1.73
MDR1YGR100W ISC1P40015 477 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W NTA1P40354 457 aa4.23□□□□□ -1.73
MDR1YGR100W SEC24P40482 926 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W RPN11P43588 306 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W YJR149WP47177 404 aa4.23□□□□□ -1.73
MDR1YGR100W LCL3P53153 274 aa4.23□□□□□ -1.73
MDR1YGR100W DUO1P53168 247 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W YNR061CP53747 219 aa4.23□□□□□ -1.73
MDR1YGR100W DUS1P53759 423 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W MET14Q02196 202 aa4.23□□□□□ -1.73
MDR1YGR100W YDR415CQ04033 374 aaPredicted RBP4.23□□□□□ -1.73
MDR1YGR100W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
MDR1YGR100W AHA1Q12449 350 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W RRI1Q12468 440 aa4.23□□□□□ -1.73
MDR1YGR100W YDL085C-AQ3E7B7 68 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W TPI1P00942 248 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W CAN1P04817 590 aa4.23□□□□□ -1.73
MDR1YGR100W ATP5P09457 212 aa4.23□□□□□ -1.73
MDR1YGR100W AIM17P23180 465 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W PRE9P23638 258 aaKnown RBP4.23□□□□□ -1.73
MDR1YGR100W MSK1P32048 576 aa4.23□□□□□ -1.73
MDR1YGR100W AME1P38313 324 aa4.23□□□□□ -1.73
MDR1YGR100W YHL041WP38730 149 aa4.23□□□□□ -1.73
MDR1YGR100W YIR007WP40566 764 aa4.23□□□□□ -1.73
MDR1YGR100W AVT1P47082 602 aa4.23□□□□□ -1.73
MDR1YGR100W OST3P48439 350 aa4.23□□□□□ -1.73
MDR1YGR100W LYS5P50113 272 aa4.23□□□□□ -1.73
MDR1YGR100W COS10P52924 374 aa4.23□□□□□ -1.73
MDR1YGR100W PUS6P53294 404 aa4.23□□□□□ -1.73
MDR1YGR100W YMR253CQ04835 414 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms