RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W YMR166CQ03829 368 aa0.8□□□□□ -2.28
CUL3YGR003W FCF1Q05498 189 aaPredicted RBP0.8□□□□□ -2.28
CUL3YGR003W RDS3Q06835 107 aaPredicted RBP0.8□□□□□ -2.28
CUL3YGR003W REX3Q12090 404 aa0.8□□□□□ -2.28
CUL3YGR003W TIM22Q12328 207 aa0.8□□□□□ -2.28
CUL3YGR003W YPR1Q12458 312 aa0.8□□□□□ -2.28
CUL3YGR003W BUD13P46947 266 aaPredicted RBP0.79□□□□□ -2.28
CUL3YGR003W LIF1P53150 421 aa0.79□□□□□ -2.28
CUL3YGR003W SYF2P53277 215 aaPredicted RBP0.79□□□□□ -2.28
CUL3YGR003W CDC14Q00684 551 aa0.79□□□□□ -2.28
CUL3YGR003W YLR297WQ05899 129 aa0.79□□□□□ -2.28
CUL3YGR003W ARC18Q05933 178 aaKnown RBP0.79□□□□□ -2.28
CUL3YGR003W YDL144CQ07589 356 aa0.79□□□□□ -2.28
CUL3YGR003W VPS68Q12016 184 aa0.79□□□□□ -2.28
CUL3YGR003W ZWF1P11412 505 aaKnown RBP0.79□□□□□ -2.28
CUL3YGR003W OPI1P21957 404 aa0.79□□□□□ -2.28
CUL3YGR003W TRX1P22217 103 aaKnown RBP0.79□□□□□ -2.28
CUL3YGR003W TOM40P23644 387 aaKnown RBP0.79□□□□□ -2.28
CUL3YGR003W COT1P32798 439 aa0.79□□□□□ -2.28
CUL3YGR003W TRM7P38238 310 aaKnown RBP0.79□□□□□ -2.28
CUL3YGR003W ATG12P38316 186 aa0.79□□□□□ -2.28
CUL3YGR003W SWT21P53873 357 aaPredicted RBP0.79□□□□□ -2.28
CUL3YGR003W FMP41P53889 259 aaKnown RBP0.79□□□□□ -2.28
CUL3YGR003W VAC14Q06708 880 aa0.79□□□□□ -2.28
CUL3YGR003W PLB3Q08108 686 aa0.79□□□□□ -2.28
CUL3YGR003W YOR268CQ08734 132 aa0.79□□□□□ -2.28
CUL3YGR003W TDH1P00360 332 aaKnown RBP0.78□□□□□ -2.28
CUL3YGR003W PET494P07390 489 aaPredicted RBP0.78□□□□□ -2.28
CUL3YGR003W AEP1P32493 518 aa0.78□□□□□ -2.28
CUL3YGR003W SPT4P32914 102 aaPredicted RBP0.78□□□□□ -2.28
CUL3YGR003W POP8P38208 133 aa0.78□□□□□ -2.28
CUL3YGR003W SEN34P39707 275 aa0.78□□□□□ -2.28
CUL3YGR003W DAN1P47178 298 aa0.78□□□□□ -2.28
CUL3YGR003W DPP1Q05521 289 aa0.78□□□□□ -2.28
CUL3YGR003W YOL019WQ08157 551 aa0.78□□□□□ -2.28
CUL3YGR003W COS2P0CX12 379 aa0.77□□□□□ -2.29
CUL3YGR003W COS3P0CX13 379 aa0.77□□□□□ -2.29
CUL3YGR003W GPI12P23797 304 aa0.77□□□□□ -2.29
CUL3YGR003W COY1P34237 679 aa0.77□□□□□ -2.29
CUL3YGR003W SWD2P36104 329 aaPredicted RBP0.77□□□□□ -2.29
CUL3YGR003W RPC37P36121 282 aa0.77□□□□□ -2.29
CUL3YGR003W AVT6P40074 448 aa0.77□□□□□ -2.29
CUL3YGR003W GCD14P46959 383 aaPredicted RBP0.77□□□□□ -2.29
CUL3YGR003W YGL185CP53100 379 aa0.77□□□□□ -2.29
CUL3YGR003W SWC4P53201 476 aa0.77□□□□□ -2.29
CUL3YGR003W ECM18Q04623 453 aa0.77□□□□□ -2.29
CUL3YGR003W YPR064WQ12492 139 aa0.77□□□□□ -2.29
CUL3YGR003W ATP6P00854 259 aa0.77□□□□□ -2.29
CUL3YGR003W TFS1P14306 219 aa0.77□□□□□ -2.29
CUL3YGR003W VMA2P16140 517 aaKnown RBP0.77□□□□□ -2.29
CUL3YGR003W PET18P25362 215 aa0.77□□□□□ -2.29
CUL3YGR003W RPL5P26321 297 aaKnown RBP0.77□□□□□ -2.29
CUL3YGR003W RPS0AP32905 252 aaKnown RBP0.77□□□□□ -2.29
CUL3YGR003W ARN2P38724 620 aa0.77□□□□□ -2.29
CUL3YGR003W YDR089WP38966 869 aa0.77□□□□□ -2.29
CUL3YGR003W KRE29P40026 464 aa0.77□□□□□ -2.29
CUL3YGR003W TVP15Q03860 143 aa0.77□□□□□ -2.29
CUL3YGR003W NNT1Q05874 261 aa0.77□□□□□ -2.29
CUL3YGR003W RRG8Q06109 277 aa0.77□□□□□ -2.29
CUL3YGR003W CDD1Q06549 142 aa0.77□□□□□ -2.29
CUL3YGR003W NOT5Q12514 560 aaPredicted RBP0.77□□□□□ -2.29
CUL3YGR003W RPP0P05317 312 aaKnown RBP0.76□□□□□ -2.29
CUL3YGR003W IFM1P25038 676 aa0.76□□□□□ -2.29
CUL3YGR003W GCG1P32656 232 aaKnown RBP0.76□□□□□ -2.29
CUL3YGR003W CAB3P36076 571 aa0.76□□□□□ -2.29
CUL3YGR003W SPL2P38839 148 aa0.76□□□□□ -2.29
CUL3YGR003W SUR2P38992 349 aa0.76□□□□□ -2.29
CUL3YGR003W FCY21P40039 528 aa0.76□□□□□ -2.29
CUL3YGR003W SER33P40510 469 aa0.76□□□□□ -2.29
CUL3YGR003W ASR1Q06834 288 aa0.76□□□□□ -2.29
CUL3YGR003W SIA1Q12212 622 aa0.76□□□□□ -2.29
CUL3YGR003W FKS1P38631 1876 aaKnown RBP0.76□□□□□ -2.29
CUL3YGR003W RAD10P06838 210 aa0.76□□□□□ -2.29
CUL3YGR003W DPM1P14020 267 aaKnown RBP0.76□□□□□ -2.29
CUL3YGR003W VPS1P21576 704 aaKnown RBP0.76□□□□□ -2.29
CUL3YGR003W YKL063CP35725 167 aa0.76□□□□□ -2.29
CUL3YGR003W MNN9P39107 395 aaKnown RBP0.76□□□□□ -2.29
CUL3YGR003W LOC1P43586 204 aaPredicted RBP0.76□□□□□ -2.29
CUL3YGR003W MNN5P46982 586 aa0.76□□□□□ -2.29
CUL3YGR003W MPP10P47083 593 aaKnown RBP0.76□□□□□ -2.29
CUL3YGR003W PNC1P53184 216 aaKnown RBP0.76□□□□□ -2.29
CUL3YGR003W SDC1Q03323 175 aa0.76□□□□□ -2.29
CUL3YGR003W YML018CQ03730 393 aa0.76□□□□□ -2.29
CUL3YGR003W POM33Q12164 279 aa0.76□□□□□ -2.29
CUL3YGR003W IZH4Q99393 312 aa0.76□□□□□ -2.29
CUL3YGR003W RPL26AP05743 127 aaKnown RBP0.75□□□□□ -2.29
CUL3YGR003W AGP3P43548 558 aa0.75□□□□□ -2.29
CUL3YGR003W IBA57P47158 497 aa0.75□□□□□ -2.29
CUL3YGR003W RPL26BP53221 127 aaKnown RBP0.75□□□□□ -2.29
CUL3YGR003W CGI121Q03705 181 aaKnown RBP0.75□□□□□ -2.29
CUL3YGR003W GRH1Q04410 372 aaKnown RBP0.75□□□□□ -2.29
CUL3YGR003W YLL007CQ07799 665 aa0.75□□□□□ -2.29
CUL3YGR003W RTC5Q12108 567 aaKnown RBP0.75□□□□□ -2.29
CUL3YGR003W YHR086W-AQ3E746 53 aa0.75□□□□□ -2.29
CUL3YGR003W SUA5P32579 426 aa0.74□□□□□ -2.29
CUL3YGR003W CAT2P32796 670 aaKnown RBP0.74□□□□□ -2.29
CUL3YGR003W CSG2P35206 410 aa0.74□□□□□ -2.29
CUL3YGR003W POP2P39008 433 aa0.74□□□□□ -2.29
CUL3YGR003W COX16P47081 118 aa0.74□□□□□ -2.29
CUL3YGR003W DSK2P48510 373 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms