RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W MED11Q99278 115 aa6.13□□□□□ -1.43
PDA1YER178W MET17P06106 444 aa6.12□□□□□ -1.43
PDA1YER178W DBF2P22204 572 aa6.12□□□□□ -1.43
PDA1YER178W ITR1P30605 584 aa6.12□□□□□ -1.43
PDA1YER178W SSE2P32590 693 aaKnown RBP6.12□□□□□ -1.43
PDA1YER178W DTR1P38125 572 aa6.12□□□□□ -1.43
PDA1YER178W THI2P38141 450 aa6.12□□□□□ -1.43
PDA1YER178W BUR6P40096 142 aa6.12□□□□□ -1.43
PDA1YER178W GAT2P40209 560 aa6.12□□□□□ -1.43
PDA1YER178W AVT7P40501 490 aa6.12□□□□□ -1.43
PDA1YER178W POP1P41812 875 aa6.12□□□□□ -1.43
PDA1YER178W DPB11P47027 764 aaPredicted RBP6.12□□□□□ -1.43
PDA1YER178W SAM37P50110 327 aa6.12□□□□□ -1.43
PDA1YER178W ACS2P52910 683 aaKnown RBP6.12□□□□□ -1.43
PDA1YER178W AIM36Q03798 255 aa6.12□□□□□ -1.43
PDA1YER178W FIN1Q03898 291 aa6.12□□□□□ -1.43
PDA1YER178W MRX10Q05648 414 aa6.12□□□□□ -1.43
PDA1YER178W RBS1Q05672 457 aaKnown RBP6.12□□□□□ -1.43
PDA1YER178W RTC5Q12108 567 aaKnown RBP6.12□□□□□ -1.43
PDA1YER178W RNH203Q12338 110 aa6.12□□□□□ -1.43
PDA1YER178W COX5BP00425 151 aa6.11□□□□□ -1.43
PDA1YER178W CDC36P06100 191 aaPredicted RBP6.11□□□□□ -1.43
PDA1YER178W SUR1P33300 382 aa6.11□□□□□ -1.43
PDA1YER178W ECT1P33412 323 aa6.11□□□□□ -1.43
PDA1YER178W GOS1P38736 223 aa6.11□□□□□ -1.43
PDA1YER178W YHR035WP38769 630 aa6.11□□□□□ -1.43
PDA1YER178W SSZ1P38788 538 aaKnown RBP6.11□□□□□ -1.43
PDA1YER178W MDM31P38880 579 aa6.11□□□□□ -1.43
PDA1YER178W YER184CP39961 794 aa6.11□□□□□ -1.43
PDA1YER178W ATF1P40353 525 aa6.11□□□□□ -1.43
PDA1YER178W CIN2P46670 268 aa6.11□□□□□ -1.43
PDA1YER178W TFB3Q03290 321 aa6.11□□□□□ -1.43
PDA1YER178W YTH1Q06102 208 aaPredicted RBP6.11□□□□□ -1.43
PDA1YER178W AIM6Q07716 390 aa6.11□□□□□ -1.43
PDA1YER178W SYC1Q08553 188 aaPredicted RBP6.11□□□□□ -1.43
PDA1YER178W MDH1P17505 334 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
PDA1YER178W SPO7P18410 259 aa6.1□□□□□ -1.43
PDA1YER178W BOS1P25385 244 aa6.1□□□□□ -1.43
PDA1YER178W ARO7P32178 256 aa6.1□□□□□ -1.43
PDA1YER178W PUP2P32379 260 aa6.1□□□□□ -1.43
PDA1YER178W RPC34P32910 317 aa6.1□□□□□ -1.43
PDA1YER178W YKL187CP34231 750 aa6.1□□□□□ -1.43
PDA1YER178W YLF2P38746 405 aa6.1□□□□□ -1.43
PDA1YER178W IRC5P43610 853 aa6.1□□□□□ -1.43
PDA1YER178W MTM1P53320 366 aa6.1□□□□□ -1.43
PDA1YER178W RPL6AQ02326 176 aaKnown RBP6.1□□□□□ -1.43
PDA1YER178W MAK3Q03503 176 aa6.1□□□□□ -1.43
PDA1YER178W NMA1Q06178 401 aaKnown RBP6.1□□□□□ -1.43
PDA1YER178W GAT3Q07928 141 aa6.1□□□□□ -1.43
PDA1YER178W RSC58Q07979 502 aa6.1□□□□□ -1.43
PDA1YER178W THI72Q08579 599 aa6.1□□□□□ -1.43
PDA1YER178W YOR378WQ08902 515 aa6.1□□□□□ -1.43
PDA1YER178W FIT3Q08907 204 aa6.1□□□□□ -1.43
PDA1YER178W IZH2Q12442 317 aa6.1□□□□□ -1.43
PDA1YER178W VCX1Q99385 411 aa6.1□□□□□ -1.43
PDA1YER178W CNA1P23287 553 aa6.09□□□□□ -1.43
PDA1YER178W MEK1P24719 497 aaPredicted RBP6.09□□□□□ -1.43
PDA1YER178W PUT3P25502 979 aaPredicted RBP6.09□□□□□ -1.43
PDA1YER178W KRR1P25586 316 aaPredicted RBP6.09□□□□□ -1.43
PDA1YER178W SRP102P36057 244 aaPredicted RBP6.09□□□□□ -1.43
PDA1YER178W TAT1P38085 619 aa6.09□□□□□ -1.43
PDA1YER178W PEX32P38292 413 aa6.09□□□□□ -1.43
PDA1YER178W QDR1P40475 563 aa6.09□□□□□ -1.43
PDA1YER178W PMT6P42934 759 aa6.09□□□□□ -1.43
PDA1YER178W LYS20P48570 428 aaKnown RBP6.09□□□□□ -1.43
PDA1YER178W PHB2P50085 310 aa6.09□□□□□ -1.43
PDA1YER178W SIP18P50263 79 aa6.09□□□□□ -1.43
PDA1YER178W MNT4P53745 580 aa6.09□□□□□ -1.43
PDA1YER178W YDR179W-AQ03983 463 aa6.09□□□□□ -1.43
PDA1YER178W ARP10Q04549 284 aa6.09□□□□□ -1.43
PDA1YER178W YMR315WQ04869 349 aaKnown RBP6.09□□□□□ -1.43
PDA1YER178W MRX8Q05473 314 aa6.09□□□□□ -1.43
PDA1YER178W HEM25Q07534 307 aa6.09□□□□□ -1.43
PDA1YER178W BRE4Q07660 1125 aa6.09□□□□□ -1.43
PDA1YER178W LYS21Q12122 440 aaKnown RBP6.09□□□□□ -1.43
PDA1YER178W YOL114CQ12322 202 aa6.09□□□□□ -1.43
PDA1YER178W MES1P00958 751 aaKnown RBP6.08□□□□□ -1.44
PDA1YER178W PHO4P07270 312 aaKnown RBP6.08□□□□□ -1.44
PDA1YER178W PRB1P09232 635 aa6.08□□□□□ -1.44
PDA1YER178W YME2P32843 850 aa6.08□□□□□ -1.44
PDA1YER178W SPT10P35208 640 aa6.08□□□□□ -1.44
PDA1YER178W YBR220CP38318 560 aa6.08□□□□□ -1.44
PDA1YER178W YMR144WP40214 342 aaKnown RBP6.08□□□□□ -1.44
PDA1YER178W SDP1P40479 209 aa6.08□□□□□ -1.44
PDA1YER178W FMC1P40491 155 aa6.08□□□□□ -1.44
PDA1YER178W YIP4P53093 235 aa6.08□□□□□ -1.44
PDA1YER178W SKO1Q02100 647 aa6.08□□□□□ -1.44
PDA1YER178W YPL077CQ02831 240 aa6.08□□□□□ -1.44
PDA1YER178W NOG1Q02892 647 aaKnown RBP6.08□□□□□ -1.44
PDA1YER178W PRP3Q03338 469 aaPredicted RBP6.08□□□□□ -1.44
PDA1YER178W YDR387CQ04162 555 aa6.08□□□□□ -1.44
PDA1YER178W NNT1Q05874 261 aa6.08□□□□□ -1.44
PDA1YER178W TMC1Q08422 150 aaPredicted RBP6.08□□□□□ -1.44
PDA1YER178W ACF2Q12168 779 aa6.08□□□□□ -1.44
PDA1YER178W RBD2Q12270 262 aa6.08□□□□□ -1.44
PDA1YER178W MKS1P34072 584 aa6.07□□□□□ -1.44
PDA1YER178W ZRT3P34240 503 aa6.07□□□□□ -1.44
PDA1YER178W SLZ1P40167 298 aa6.07□□□□□ -1.44
PDA1YER178W NTA1P40354 457 aa6.07□□□□□ -1.44
PDA1YER178W TIR3P40552 269 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms