RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C ATG18P43601 500 aa1.07□□□□□ -2.24
SWI4YER111C TAD2P47058 250 aa1.07□□□□□ -2.24
SWI4YER111C BIO3P50277 480 aa1.07□□□□□ -2.24
SWI4YER111C VAC7P53950 1165 aa1.07□□□□□ -2.24
SWI4YER111C ALG11P53954 548 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C MRX11Q03079 207 aa1.07□□□□□ -2.24
SWI4YER111C PAL1Q05518 499 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C GIS3Q12418 502 aa1.07□□□□□ -2.24
SWI4YER111C FOL3Q12676 427 aaPredicted RBP1.07□□□□□ -2.24
SWI4YER111C TY4B-HP0C2J7 1802 aa1.07□□□□□ -2.24
SWI4YER111C PMD1P32634 1753 aa1.07□□□□□ -2.24
SWI4YER111C STE7P06784 515 aa1.07□□□□□ -2.24
SWI4YER111C RAD3P06839 778 aa1.07□□□□□ -2.24
SWI4YER111C FRS2P15625 503 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C POL30P15873 258 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C RPB5P20434 215 aa1.07□□□□□ -2.24
SWI4YER111C ARO2P28777 376 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C DOA4P32571 926 aa1.07□□□□□ -2.24
SWI4YER111C YPT53P36019 220 aa1.07□□□□□ -2.24
SWI4YER111C LSM12P38828 187 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C BAT1P38891 393 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C FMC1P40491 155 aa1.07□□□□□ -2.24
SWI4YER111C PMT4P46971 762 aa1.07□□□□□ -2.24
SWI4YER111C YJR012CP47087 207 aa1.07□□□□□ -2.24
SWI4YER111C PRP38Q00723 242 aaPredicted RBP1.07□□□□□ -2.24
SWI4YER111C YMR027WQ04371 470 aa1.07□□□□□ -2.24
SWI4YER111C ADH6Q04894 360 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C TAZ1Q06510 381 aa1.07□□□□□ -2.24
SWI4YER111C YPL278CQ08990 100 aa1.07□□□□□ -2.24
SWI4YER111C TAF10Q12030 206 aa1.07□□□□□ -2.24
SWI4YER111C SLM3Q12093 417 aa1.07□□□□□ -2.24
SWI4YER111C ERV2Q12284 196 aa1.07□□□□□ -2.24
SWI4YER111C LAG2Q92325 660 aa1.07□□□□□ -2.24
SWI4YER111C BI3Q9ZZW7 517 aa1.07□□□□□ -2.24
SWI4YER111C ZRC1P20107 442 aa1.07□□□□□ -2.24
SWI4YER111C ARO4P32449 370 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C CDC13P32797 924 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C BMH2P34730 273 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C RPC37P36121 282 aa1.07□□□□□ -2.24
SWI4YER111C SWD3P38123 315 aa1.07□□□□□ -2.24
SWI4YER111C PET8P38921 284 aa1.07□□□□□ -2.24
SWI4YER111C PET100P38958 111 aa1.07□□□□□ -2.24
SWI4YER111C PRM9P39551 298 aa1.07□□□□□ -2.24
SWI4YER111C SHQ1P40486 507 aaPredicted RBP1.07□□□□□ -2.24
SWI4YER111C YIL012WP40551 113 aa1.07□□□□□ -2.24
SWI4YER111C MEP2P41948 499 aa1.07□□□□□ -2.24
SWI4YER111C BNS1P50084 137 aa1.07□□□□□ -2.24
SWI4YER111C DPP1Q05521 289 aa1.07□□□□□ -2.24
SWI4YER111C SRO7Q12038 1033 aa1.07□□□□□ -2.24
SWI4YER111C ADH2P00331 348 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C PRB1P09232 635 aa1.06□□□□□ -2.24
SWI4YER111C TFS1P14306 219 aa1.06□□□□□ -2.24
SWI4YER111C CDC50P25656 391 aa1.06□□□□□ -2.24
SWI4YER111C DEP1P31385 405 aa1.06□□□□□ -2.24
SWI4YER111C PRS1P32895 427 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C GPI18P38211 433 aa1.06□□□□□ -2.24
SWI4YER111C RFS1P38234 210 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C YER186CP40101 306 aa1.06□□□□□ -2.24
SWI4YER111C RPL10P41805 221 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C GDS1P41913 522 aa1.06□□□□□ -2.24
SWI4YER111C CGR1P53188 120 aa1.06□□□□□ -2.24
SWI4YER111C TIM21P53220 239 aa1.06□□□□□ -2.24
SWI4YER111C SUR7P54003 302 aa1.06□□□□□ -2.24
SWI4YER111C MMT2Q08970 484 aa1.06□□□□□ -2.24
SWI4YER111C PLP2Q12017 286 aa1.06□□□□□ -2.24
SWI4YER111C YMR316C-AI2HB70 103 aa1.06□□□□□ -2.24
SWI4YER111C EPT1P22140 391 aa1.06□□□□□ -2.24
SWI4YER111C CHA1P25379 360 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C POF1P25576 258 aa1.06□□□□□ -2.24
SWI4YER111C PDC2P32896 925 aa1.06□□□□□ -2.24
SWI4YER111C CYM1P32898 989 aa1.06□□□□□ -2.24
SWI4YER111C CSE1P33307 960 aa1.06□□□□□ -2.24
SWI4YER111C LDB7P38210 180 aa1.06□□□□□ -2.24
SWI4YER111C TAE1P38340 232 aa1.06□□□□□ -2.24
SWI4YER111C BFR1P38934 470 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
SWI4YER111C SOP4P39543 234 aaPredicted RBP1.06□□□□□ -2.24
SWI4YER111C UBC13P52490 153 aa1.06□□□□□ -2.24
SWI4YER111C NBP1P52919 319 aaPredicted RBP1.06□□□□□ -2.24
SWI4YER111C YPS5P53057 165 aa1.06□□□□□ -2.24
SWI4YER111C FMP48P53233 369 aa1.06□□□□□ -2.24
SWI4YER111C TPC1P53257 314 aa1.06□□□□□ -2.24
SWI4YER111C SKI8Q02793 397 aaPredicted RBP1.06□□□□□ -2.24
SWI4YER111C INP1Q03694 420 aa1.06□□□□□ -2.24
SWI4YER111C MYO5Q04439 1219 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C SFH1Q06168 426 aa1.06□□□□□ -2.24
SWI4YER111C PAM18Q07914 168 aa1.06□□□□□ -2.24
SWI4YER111C YLR012CQ07927 99 aa1.06□□□□□ -2.24
SWI4YER111C YOL029CQ08187 201 aa1.06□□□□□ -2.24
SWI4YER111C RRG7Q08774 242 aaPredicted RBP1.06□□□□□ -2.24
SWI4YER111C VIK1Q12045 647 aa1.06□□□□□ -2.24
SWI4YER111C PPA2P28239 310 aa1.06□□□□□ -2.24
SWI4YER111C IMP1P28627 190 aa1.06□□□□□ -2.24
SWI4YER111C KRE6P32486 720 aa1.06□□□□□ -2.24
SWI4YER111C MRPL6P32904 214 aa1.06□□□□□ -2.24
SWI4YER111C ANR2P36090 516 aaPredicted RBP1.06□□□□□ -2.24
SWI4YER111C DED81P38707 554 aaKnown RBP1.06□□□□□ -2.24
SWI4YER111C PTI1P39927 425 aaPredicted RBP1.06□□□□□ -2.24
SWI4YER111C YJR054WP47114 497 aa1.06□□□□□ -2.24
SWI4YER111C VHT1P53241 593 aa1.06□□□□□ -2.24
SWI4YER111C ADD37Q03233 198 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms