RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C YHR214C-EQ8TGK0 99 aa9.63□□□□□ -0.87
SPC25YER018C CBP6P07253 162 aaPredicted RBP9.62□□□□□ -0.87
SPC25YER018C SPO7P18410 259 aa9.62□□□□□ -0.87
SPC25YER018C ADH7P25377 361 aa9.62□□□□□ -0.87
SPC25YER018C PTC6P25646 442 aa9.62□□□□□ -0.87
SPC25YER018C VPS17P32913 551 aa9.62□□□□□ -0.87
SPC25YER018C SOF1P33750 489 aaKnown RBP9.62□□□□□ -0.87
SPC25YER018C ANR2P36090 516 aaPredicted RBP9.62□□□□□ -0.87
SPC25YER018C ADO1P47143 340 aaKnown RBP9.62□□□□□ -0.87
SPC25YER018C MSY1P48527 492 aa9.62□□□□□ -0.87
SPC25YER018C RCF1Q03713 159 aa9.62□□□□□ -0.87
SPC25YER018C YDR514CQ04408 483 aa9.62□□□□□ -0.87
SPC25YER018C MRX8Q05473 314 aa9.62□□□□□ -0.87
SPC25YER018C MTH1P35198 433 aa9.61□□□□□ -0.87
SPC25YER018C YBR137WP38276 179 aa9.61□□□□□ -0.87
SPC25YER018C PMT6P42934 759 aa9.61□□□□□ -0.87
SPC25YER018C IMO32P53219 342 aa9.61□□□□□ -0.87
SPC25YER018C PET191Q02772 108 aa9.61□□□□□ -0.87
SPC25YER018C GPI17Q04080 534 aa9.61□□□□□ -0.87
SPC25YER018C HLR1Q04429 423 aa9.61□□□□□ -0.87
SPC25YER018C YLR352WQ06479 807 aa9.61□□□□□ -0.87
SPC25YER018C PEX27Q08580 376 aa9.61□□□□□ -0.87
SPC25YER018C TY1A-BLQ12266 440 aa9.61□□□□□ -0.87
SPC25YER018C PDE2P06776 526 aa9.6□□□□□ -0.87
SPC25YER018C MRP1P10662 321 aaKnown RBP9.6□□□□□ -0.87
SPC25YER018C MEK1P24719 497 aaPredicted RBP9.6□□□□□ -0.87
SPC25YER018C ZUO1P32527 433 aaKnown RBP9.6□□□□□ -0.87
SPC25YER018C DOA4P32571 926 aa9.6□□□□□ -0.87
SPC25YER018C SPT10P35208 640 aa9.6□□□□□ -0.87
SPC25YER018C SHE2P36068 246 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
SPC25YER018C PEX32P38292 413 aa9.6□□□□□ -0.87
SPC25YER018C TIR3P40552 269 aa9.6□□□□□ -0.87
SPC25YER018C DPB11P47027 764 aaPredicted RBP9.6□□□□□ -0.87
SPC25YER018C CCC1P47818 322 aa9.6□□□□□ -0.87
SPC25YER018C PMT5P52867 743 aa9.6□□□□□ -0.87
SPC25YER018C RAI1P53063 387 aaKnown RBP9.6□□□□□ -0.87
SPC25YER018C SRP1Q02821 542 aaKnown RBP9.6□□□□□ -0.87
SPC25YER018C TSR2Q06672 205 aaKnown RBP9.6□□□□□ -0.87
SPC25YER018C SSK1Q07084 712 aa9.6□□□□□ -0.87
SPC25YER018C YDL218WQ07629 317 aa9.6□□□□□ -0.87
SPC25YER018C NGL1Q08213 363 aaKnown RBP9.6□□□□□ -0.87
SPC25YER018C TIR4Q12218 487 aaPredicted RBP9.6□□□□□ -0.87
SPC25YER018C SUS1Q6WNK7 96 aa9.6□□□□□ -0.87
SPC25YER018C PTI1P39927 425 aaPredicted RBP9.59□□□□□ -0.87
SPC25YER018C RTT105P40063 208 aa9.59□□□□□ -0.87
SPC25YER018C SLZ1P40167 298 aa9.59□□□□□ -0.87
SPC25YER018C HSV2P50079 448 aaPredicted RBP9.59□□□□□ -0.87
SPC25YER018C CWC23P52868 283 aaPredicted RBP9.59□□□□□ -0.87
SPC25YER018C RMD9P53140 646 aaKnown RBP9.59□□□□□ -0.87
SPC25YER018C MRP51Q02950 344 aa9.59□□□□□ -0.87
SPC25YER018C YMR265CQ03508 461 aaKnown RBP9.59□□□□□ -0.87
SPC25YER018C TDA1Q03533 586 aa9.59□□□□□ -0.87
SPC25YER018C SSY1Q03770 852 aa9.59□□□□□ -0.87
SPC25YER018C AIM36Q03798 255 aa9.59□□□□□ -0.87
SPC25YER018C RVB1Q03940 463 aaKnown RBP9.59□□□□□ -0.87
SPC25YER018C GAS2Q06135 555 aa9.59□□□□□ -0.87
SPC25YER018C NMA1Q06178 401 aaKnown RBP9.59□□□□□ -0.87
SPC25YER018C YPL272CQ08984 517 aa9.59□□□□□ -0.87
SPC25YER018C BLM10P43583 2143 aa9.58□□□□□ -0.88
SPC25YER018C SOD2P00447 233 aa9.58□□□□□ -0.88
SPC25YER018C GCN4P03069 281 aa9.58□□□□□ -0.88
SPC25YER018C COX9P07255 59 aa9.58□□□□□ -0.88
SPC25YER018C RPS18AP0CX55 146 aaKnown RBP9.58□□□□□ -0.88
SPC25YER018C RPS18BP0CX56 146 aaPredicted RBP9.58□□□□□ -0.88
SPC25YER018C NPL6P32832 435 aa9.58□□□□□ -0.88
SPC25YER018C AIM3P38266 947 aaKnown RBP9.58□□□□□ -0.88
SPC25YER018C MGE1P38523 228 aa9.58□□□□□ -0.88
SPC25YER018C SLS1P42900 643 aa9.58□□□□□ -0.88
SPC25YER018C ATG18P43601 500 aa9.58□□□□□ -0.88
SPC25YER018C YJR120WP47157 116 aa9.58□□□□□ -0.88
SPC25YER018C RPN14P53196 417 aa9.58□□□□□ -0.88
SPC25YER018C YNR040WP53736 256 aa9.58□□□□□ -0.88
SPC25YER018C COQ11Q05892 277 aa9.58□□□□□ -0.88
SPC25YER018C HRI1Q05905 244 aaKnown RBP9.58□□□□□ -0.88
SPC25YER018C RTC5Q12108 567 aaKnown RBP9.58□□□□□ -0.88
SPC25YER018C YBL113CQ7M4S9 792 aa9.58□□□□□ -0.88
SPC25YER018C YBR056W-AI2HB52 66 aa9.57□□□□□ -0.88
SPC25YER018C IPP1P00817 287 aaKnown RBP9.57□□□□□ -0.88
SPC25YER018C ERG4P25340 473 aa9.57□□□□□ -0.88
SPC25YER018C PAU2P32612 120 aa9.57□□□□□ -0.88
SPC25YER018C YHK8P38776 514 aa9.57□□□□□ -0.88
SPC25YER018C SER2P42941 309 aa9.57□□□□□ -0.88
SPC25YER018C LUC7Q07508 261 aaPredicted RBP9.57□□□□□ -0.88
SPC25YER018C MCH4Q08268 501 aa9.57□□□□□ -0.88
SPC25YER018C YDL180WQ12301 547 aa9.57□□□□□ -0.88
SPC25YER018C NOP56Q12460 504 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
SPC25YER018C ADK1P07170 222 aaKnown RBP9.56□□□□□ -0.88
SPC25YER018C ZRT3P34240 503 aa9.56□□□□□ -0.88
SPC25YER018C TMA19P35691 167 aaKnown RBP9.56□□□□□ -0.88
SPC25YER018C MIT1P40002 666 aa9.56□□□□□ -0.88
SPC25YER018C AAD14P42884 376 aa9.56□□□□□ -0.88
SPC25YER018C DOC1P53068 250 aa9.56□□□□□ -0.88
SPC25YER018C SOK2P53438 785 aaPredicted RBP9.56□□□□□ -0.88
SPC25YER018C ELA1P53861 379 aaPredicted RBP9.56□□□□□ -0.88
SPC25YER018C PLB2Q03674 706 aa9.56□□□□□ -0.88
SPC25YER018C MSS11Q03825 758 aa9.56□□□□□ -0.88
SPC25YER018C ASR1Q06834 288 aa9.56□□□□□ -0.88
SPC25YER018C RRI1Q12468 440 aa9.56□□□□□ -0.88
SPC25YER018C RPS16AP0CX51 143 aaKnown RBP9.55□□□□□ -0.88
SPC25YER018C RPS16BP0CX52 143 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 168.5 ms