RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TCA17, Length 459 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCA17	YEL048C	MRPL37	P36532	105 aa		2.69	□□□□□ -1.98
TCA17	YEL048C	EDC2	P40023	145 aa	Predicted RBP	2.69	□□□□□ -1.98
TCA17	YEL048C	AGP3	P43548	558 aa		2.69	□□□□□ -1.98
TCA17	YEL048C	YFR045W	P43617	309 aa		2.69	□□□□□ -1.98
TCA17	YEL048C	RRN5	Q02983	363 aa		2.69	□□□□□ -1.98
TCA17	YEL048C	SNX41	Q04053	625 aa		2.69	□□□□□ -1.98
TCA17	YEL048C	GMC2	Q06201	188 aa		2.69	□□□□□ -1.98
TCA17	YEL048C	ERP3	Q12403	225 aa		2.69	□□□□□ -1.98
TCA17	YEL048C	MET2	P08465	486 aa		2.68	□□□□□ -1.98
TCA17	YEL048C	RPL31A	P0C2H8	113 aa	Known RBP	2.68	□□□□□ -1.98
TCA17	YEL048C	FRS2	P15625	503 aa	Known RBP	2.68	□□□□□ -1.98
TCA17	YEL048C	RPL16B	P26785	198 aa	Known RBP	2.68	□□□□□ -1.98
TCA17	YEL048C	YKL063C	P35725	167 aa		2.68	□□□□□ -1.98
TCA17	YEL048C	YKR032W	P36127	104 aa		2.68	□□□□□ -1.98
TCA17	YEL048C	SOP4	P39543	234 aa	Predicted RBP	2.68	□□□□□ -1.98
TCA17	YEL048C	YNR066C	P53752	436 aa		2.68	□□□□□ -1.98
TCA17	YEL048C	RRP42	Q12277	265 aa	Predicted RBP	2.68	□□□□□ -1.98
TCA17	YEL048C	GCG1	P32656	232 aa	Known RBP	2.67	□□□□□ -1.98
TCA17	YEL048C	KAP114	P53067	1004 aa		2.67	□□□□□ -1.98
TCA17	YEL048C	YNL040W	P53960	456 aa	Predicted RBP	2.67	□□□□□ -1.98
TCA17	YEL048C	SPP2	Q02521	185 aa		2.67	□□□□□ -1.98
TCA17	YEL048C	VIK1	Q12045	647 aa		2.67	□□□□□ -1.98
TCA17	YEL048C	MRX4	Q12467	430 aa		2.67	□□□□□ -1.98
TCA17	YEL048C	ILV1	P00927	576 aa	Known RBP	2.66	□□□□□ -1.98
TCA17	YEL048C	YSR3	P23501	404 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	RPC37	P36121	282 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	PET8	P38921	284 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	YIA6	P40556	373 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	FMP33	P46998	180 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	UBC13	P52490	153 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	MIX17	Q03667	156 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	YLR446W	Q06204	433 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	ASR1	Q06834	288 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	MED4	Q12343	284 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	YPR064W	Q12492	139 aa		2.66	□□□□□ -1.98
TCA17	YEL048C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
TCA17	YEL048C	TPO5	P36029	618 aa		2.65	□□□□□ -1.99
TCA17	YEL048C	SHQ1	P40486	507 aa	Predicted RBP	2.65	□□□□□ -1.99
TCA17	YEL048C	YPT32	P51996	222 aa	Known RBP	2.65	□□□□□ -1.99
TCA17	YEL048C	ACT1	P60010	375 aa	Known RBP	2.65	□□□□□ -1.99
TCA17	YEL048C	YLL007C	Q07799	665 aa		2.65	□□□□□ -1.99
TCA17	YEL048C	SSK22	P25390	1331 aa	Predicted RBP	2.65	□□□□□ -1.99
TCA17	YEL048C	TDH1	P00360	332 aa	Known RBP	2.64	□□□□□ -1.99
TCA17	YEL048C	RSR1	P13856	272 aa		2.64	□□□□□ -1.99
TCA17	YEL048C	COY1	P34237	679 aa		2.64	□□□□□ -1.99
TCA17	YEL048C	AIM29	P36154	155 aa		2.64	□□□□□ -1.99
TCA17	YEL048C	GDS1	P41913	522 aa		2.64	□□□□□ -1.99
TCA17	YEL048C	NUP84	P52891	726 aa		2.64	□□□□□ -1.99
TCA17	YEL048C	ARC18	Q05933	178 aa	Known RBP	2.64	□□□□□ -1.99
TCA17	YEL048C	RRT8	Q08219	342 aa		2.64	□□□□□ -1.99
TCA17	YEL048C	LAG2	Q92325	660 aa		2.64	□□□□□ -1.99
TCA17	YEL048C	TFS1	P14306	219 aa		2.63	□□□□□ -1.99
TCA17	YEL048C	VPS1	P21576	704 aa	Known RBP	2.63	□□□□□ -1.99
TCA17	YEL048C	VPH2	P32341	215 aa		2.63	□□□□□ -1.99
TCA17	YEL048C	COT1	P32798	439 aa		2.63	□□□□□ -1.99
TCA17	YEL048C	IMP3	P32899	183 aa	Predicted RBP	2.63	□□□□□ -1.99
TCA17	YEL048C	NPT1	P39683	429 aa	Known RBP	2.63	□□□□□ -1.99
TCA17	YEL048C	YAR1	P46683	200 aa		2.63	□□□□□ -1.99
TCA17	YEL048C	LIA1	P47120	325 aa	Known RBP	2.63	□□□□□ -1.99
TCA17	YEL048C	LSB1	P53281	241 aa		2.63	□□□□□ -1.99
TCA17	YEL048C	YLR173W	Q06247	608 aa		2.63	□□□□□ -1.99
TCA17	YEL048C	CLP1	Q08685	445 aa	Predicted RBP	2.63	□□□□□ -1.99
TCA17	YEL048C	YOR292C	Q08743	309 aa		2.63	□□□□□ -1.99
TCA17	YEL048C	COX2	P00410	251 aa		2.62	□□□□□ -1.99
TCA17	YEL048C	KRE1	P17260	313 aa		2.62	□□□□□ -1.99
TCA17	YEL048C	MET16	P18408	261 aa	Predicted RBP	2.62	□□□□□ -1.99
TCA17	YEL048C	RSA4	P25382	515 aa	Known RBP	2.62	□□□□□ -1.99
TCA17	YEL048C	MRPL6	P32904	214 aa		2.62	□□□□□ -1.99
TCA17	YEL048C	SHC1	P39000	512 aa		2.62	□□□□□ -1.99
TCA17	YEL048C	TAD2	P47058	250 aa		2.62	□□□□□ -1.99
TCA17	YEL048C	CPD1	P53314	239 aa		2.62	□□□□□ -1.99
TCA17	YEL048C	TRM44	Q02648	567 aa	Known RBP	2.62	□□□□□ -1.99
TCA17	YEL048C	SEC13	Q04491	297 aa	Known RBP	2.62	□□□□□ -1.99
TCA17	YEL048C	CDD1	Q06549	142 aa		2.62	□□□□□ -1.99
TCA17	YEL048C	POM33	Q12164	279 aa		2.62	□□□□□ -1.99
TCA17	YEL048C	TDH2	P00358	332 aa	Known RBP	2.61	□□□□□ -1.99
TCA17	YEL048C	MSF1	P08425	469 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	YAK1	P14680	807 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	DAL82	P21705	255 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	AEP1	P32493	518 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	SUA5	P32579	426 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	PRM9	P39551	298 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	DDI1	P40087	428 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	LIF1	P53150	421 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	ALG11	P53954	548 aa	Known RBP	2.61	□□□□□ -1.99
TCA17	YEL048C	YMR209C	Q03648	457 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	VBA1	Q04301	562 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	ADH6	Q04894	360 aa	Known RBP	2.61	□□□□□ -1.99
TCA17	YEL048C	TAF9	Q05027	157 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	BTS1	Q12051	335 aa		2.61	□□□□□ -1.99
TCA17	YEL048C	RUD3	Q12234	484 aa	Known RBP	2.61	□□□□□ -1.99
TCA17	YEL048C	HIS1	P00498	297 aa	Known RBP	2.6	□□□□□ -1.99
TCA17	YEL048C	YOL163W	P0CF20	169 aa		2.6	□□□□□ -1.99
TCA17	YEL048C	MRP1	P10662	321 aa	Known RBP	2.6	□□□□□ -1.99
TCA17	YEL048C	CDC42	P19073	191 aa		2.6	□□□□□ -1.99
TCA17	YEL048C	PRE7	P23724	241 aa	Known RBP	2.6	□□□□□ -1.99
TCA17	YEL048C	RRT12	P25381	491 aa		2.6	□□□□□ -1.99
TCA17	YEL048C	YPC1	P38298	316 aa		2.6	□□□□□ -1.99
TCA17	YEL048C	HSM3	P38348	480 aa		2.6	□□□□□ -1.99
TCA17	YEL048C	VAB2	P40003	282 aa		2.6	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms