RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W EXO84P38261 753 aa1.52□□□□□ -2.17
CFT1YDR301W YHL037CP38733 133 aa1.52□□□□□ -2.17
CFT1YDR301W NVJ1P38881 321 aa1.52□□□□□ -2.17
CFT1YDR301W FMP52P40008 231 aa1.52□□□□□ -2.17
CFT1YDR301W PUG1P40100 303 aa1.52□□□□□ -2.17
CFT1YDR301W PFS2P42841 465 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W VPS73P53142 486 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W PEF1P53238 335 aa1.52□□□□□ -2.17
CFT1YDR301W ATG4P53867 494 aa1.52□□□□□ -2.17
CFT1YDR301W DML1Q03652 475 aa1.52□□□□□ -2.17
CFT1YDR301W GIS1Q03833 894 aa1.52□□□□□ -2.17
CFT1YDR301W RVB1Q03940 463 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W RSM24Q03976 319 aa1.52□□□□□ -2.17
CFT1YDR301W IPK1Q06667 281 aa1.52□□□□□ -2.17
CFT1YDR301W SSK1Q07084 712 aa1.52□□□□□ -2.17
CFT1YDR301W DTD1Q07648 150 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W GRC3Q07845 632 aa1.52□□□□□ -2.17
CFT1YDR301W SKI7Q08491 747 aaPredicted RBP1.52□□□□□ -2.17
CFT1YDR301W SPC3Q12133 184 aa1.52□□□□□ -2.17
CFT1YDR301W MSH5Q12175 901 aa1.52□□□□□ -2.17
CFT1YDR301W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17 RIP-Chip
CFT1YDR301W REP1P03871 373 aa1.52□□□□□ -2.17
CFT1YDR301W PDE2P06776 526 aa1.52□□□□□ -2.17
CFT1YDR301W YHR214C-DP0CX93 97 aa1.52□□□□□ -2.17
CFT1YDR301W MATALPHA1P0CY06 175 aa1.52□□□□□ -2.17
CFT1YDR301W HMLALPHA1P0CY07 175 aa1.52□□□□□ -2.17
CFT1YDR301W PDX1P16451 410 aa1.52□□□□□ -2.17
CFT1YDR301W RPA135P22138 1203 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W PRP28P23394 588 aa1.52□□□□□ -2.17
CFT1YDR301W GIT1P25346 518 aa1.52□□□□□ -2.17
CFT1YDR301W YCL002CP25565 263 aa1.52□□□□□ -2.17
CFT1YDR301W CAM1P29547 415 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W HSP150P32478 413 aa1.52□□□□□ -2.17
CFT1YDR301W MTC4P38335 694 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W YJL193WP39542 402 aa1.52□□□□□ -2.17
CFT1YDR301W AIM10P39965 576 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W YER010CP40011 234 aa1.52□□□□□ -2.17
CFT1YDR301W IRC6P43615 237 aa1.52□□□□□ -2.17
CFT1YDR301W IKS1P47042 667 aa1.52□□□□□ -2.17
CFT1YDR301W YGR066CP53242 292 aa1.52□□□□□ -2.17
CFT1YDR301W SLI1P53304 468 aa1.52□□□□□ -2.17
CFT1YDR301W OGG1P53397 376 aaPredicted RBP1.52□□□□□ -2.17
CFT1YDR301W BUD17P53727 317 aa1.52□□□□□ -2.17
CFT1YDR301W SUR7P54003 302 aa1.52□□□□□ -2.17
CFT1YDR301W EKI1Q03764 534 aa1.52□□□□□ -2.17
CFT1YDR301W TY1A-MR1Q04215 440 aa1.52□□□□□ -2.17
CFT1YDR301W MRPL35Q06678 367 aa1.52□□□□□ -2.17
CFT1YDR301W CDA2Q06703 312 aa1.52□□□□□ -2.17
CFT1YDR301W YRA1Q12159 226 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W ERG27Q12452 347 aaKnown RBP1.52□□□□□ -2.17
CFT1YDR301W OPI3P05375 206 aa1.51□□□□□ -2.17
CFT1YDR301W CHO1P08456 276 aa1.51□□□□□ -2.17
CFT1YDR301W AHC2P25649 128 aa1.51□□□□□ -2.17
CFT1YDR301W YEF1P32622 495 aa1.51□□□□□ -2.17
CFT1YDR301W MRPL39P36533 70 aa1.51□□□□□ -2.17
CFT1YDR301W ALG14P38242 237 aa1.51□□□□□ -2.17
CFT1YDR301W APE4P38821 490 aa1.51□□□□□ -2.17
CFT1YDR301W TDA11P38854 504 aa1.51□□□□□ -2.17
CFT1YDR301W CIN1P40987 1014 aa1.51□□□□□ -2.17
CFT1YDR301W ECO1P43605 281 aa1.51□□□□□ -2.17
CFT1YDR301W TPN1P53099 579 aa1.51□□□□□ -2.17
CFT1YDR301W MTM1P53320 366 aa1.51□□□□□ -2.17
CFT1YDR301W BSC5P53755 489 aa1.51□□□□□ -2.17
CFT1YDR301W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
CFT1YDR301W YDR387CQ04162 555 aa1.51□□□□□ -2.17
CFT1YDR301W RCN2Q12044 265 aa1.51□□□□□ -2.17
CFT1YDR301W YBR182C-AQ8TGU6 64 aa1.51□□□□□ -2.17
CFT1YDR301W ARF1P11076 181 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W SPO7P18410 259 aa1.51□□□□□ -2.17
CFT1YDR301W ATG15P25641 520 aa1.51□□□□□ -2.17
CFT1YDR301W CPR3P25719 182 aa1.51□□□□□ -2.17
CFT1YDR301W ZUO1P32527 433 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W ANR2P36090 516 aaPredicted RBP1.51□□□□□ -2.17
CFT1YDR301W MAL32P38158 584 aa1.51□□□□□ -2.17
CFT1YDR301W YBR138CP38277 524 aa1.51□□□□□ -2.17
CFT1YDR301W ECM34P38728 170 aa1.51□□□□□ -2.17
CFT1YDR301W PRM5P40476 318 aa1.51□□□□□ -2.17
CFT1YDR301W SWP82P43554 623 aa1.51□□□□□ -2.17
CFT1YDR301W YJR120WP47157 116 aa1.51□□□□□ -2.17
CFT1YDR301W MAL12P53341 584 aa1.51□□□□□ -2.17
CFT1YDR301W YNR062CP53748 327 aa1.51□□□□□ -2.17
CFT1YDR301W COS1P53822 381 aa1.51□□□□□ -2.17
CFT1YDR301W ELA1P53861 379 aaPredicted RBP1.51□□□□□ -2.17
CFT1YDR301W SMX3P54999 86 aaPredicted RBP1.51□□□□□ -2.17
CFT1YDR301W TDA1Q03533 586 aa1.51□□□□□ -2.17
CFT1YDR301W COQ11Q05892 277 aa1.51□□□□□ -2.17
CFT1YDR301W RDL2Q08742 149 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W YPL191CQ08930 360 aa1.51□□□□□ -2.17
CFT1YDR301W RRI1Q12468 440 aa1.51□□□□□ -2.17
CFT1YDR301W RPL7AP05737 244 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W SSA3P09435 649 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W NFT1P0CE68 1218 aa1.51□□□□□ -2.17
CFT1YDR301W DPB2P24482 689 aaPredicted RBP1.51□□□□□ -2.17
CFT1YDR301W PAU2P32612 120 aa1.51□□□□□ -2.17
CFT1YDR301W YME2P32843 850 aa1.51□□□□□ -2.17
CFT1YDR301W SHM2P37291 469 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W SHE1P38200 338 aa1.51□□□□□ -2.17
CFT1YDR301W RPS20P38701 121 aaKnown RBP1.51□□□□□ -2.17
CFT1YDR301W MDM31P38880 579 aa1.51□□□□□ -2.17
CFT1YDR301W PTI1P39927 425 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms