RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C RPS28AQ3E7X9 67 aaPredicted RBP4.05□□□□□ -1.76
SPR28YDR218C SIR4P11978 1358 aa4.04□□□□□ -1.76
SPR28YDR218C REP1P03871 373 aa4.04□□□□□ -1.76
SPR28YDR218C AQY1P0CD91 305 aa4.04□□□□□ -1.76
SPR28YDR218C URA6P15700 204 aa4.04□□□□□ -1.76
SPR28YDR218C HEM15P16622 393 aa4.04□□□□□ -1.76
SPR28YDR218C EXG1P23776 448 aaKnown RBP4.04□□□□□ -1.76
SPR28YDR218C RAD5P32849 1169 aaPredicted RBP4.04□□□□□ -1.76
SPR28YDR218C SPT4P32914 102 aaPredicted RBP4.04□□□□□ -1.76
SPR28YDR218C MCH2P36032 473 aa4.04□□□□□ -1.76
SPR28YDR218C JEN1P36035 616 aa4.04□□□□□ -1.76
SPR28YDR218C YBR241CP38142 488 aa4.04□□□□□ -1.76
SPR28YDR218C RSM25P40496 264 aa4.04□□□□□ -1.76
SPR28YDR218C TES1P41903 349 aaKnown RBP4.04□□□□□ -1.76
SPR28YDR218C AIM23P47015 356 aa4.04□□□□□ -1.76
SPR28YDR218C ALG13P53178 202 aa4.04□□□□□ -1.76
SPR28YDR218C TRM44Q02648 567 aaKnown RBP4.04□□□□□ -1.76
SPR28YDR218C SNO1Q03144 224 aa4.04□□□□□ -1.76
SPR28YDR218C PCL9Q12477 304 aa4.04□□□□□ -1.76
SPR28YDR218C LSO2Q3E772 92 aaKnown RBP4.04□□□□□ -1.76
SPR28YDR218C ISY1P21374 235 aaPredicted RBP4.03□□□□□ -1.76
SPR28YDR218C RPL16AP26784 199 aaKnown RBP4.03□□□□□ -1.76
SPR28YDR218C YKL187CP34231 750 aa4.03□□□□□ -1.76
SPR28YDR218C KTI12P34253 313 aaKnown RBP4.03□□□□□ -1.76
SPR28YDR218C YCR087C-AP37263 153 aa4.03□□□□□ -1.76
SPR28YDR218C GRE3P38715 327 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SPR28YDR218C WSC4P38739 605 aa4.03□□□□□ -1.76
SPR28YDR218C MET30P39014 640 aa4.03□□□□□ -1.76
SPR28YDR218C WWM1P43582 211 aaKnown RBP4.03□□□□□ -1.76
SPR28YDR218C YFH7P43591 353 aa4.03□□□□□ -1.76
SPR28YDR218C UBC13P52490 153 aa4.03□□□□□ -1.76
SPR28YDR218C CDH1P53197 566 aa4.03□□□□□ -1.76
SPR28YDR218C ABF2Q02486 183 aa4.03□□□□□ -1.76
SPR28YDR218C DTD1Q07648 150 aaKnown RBP4.03□□□□□ -1.76
SPR28YDR218C THI20Q08224 551 aa4.03□□□□□ -1.76
SPR28YDR218C YNG1Q08465 219 aa4.03□□□□□ -1.76
SPR28YDR218C RDL2Q08742 149 aaKnown RBP4.03□□□□□ -1.76
SPR28YDR218C RSA1Q08932 381 aa4.03□□□□□ -1.76
SPR28YDR218C YDL009CQ12210 107 aa4.03□□□□□ -1.76
SPR28YDR218C EMP46Q12396 444 aa4.03□□□□□ -1.76
SPR28YDR218C YPL119C-AQ3E751 87 aa4.03□□□□□ -1.76
SPR28YDR218C TAF2P23255 1407 aa4.03□□□□□ -1.76
SPR28YDR218C BCY1P07278 416 aaKnown RBP4.02□□□□□ -1.77
SPR28YDR218C PPH21P23594 369 aa4.02□□□□□ -1.77
SPR28YDR218C SGE1P33335 543 aa4.02□□□□□ -1.77
SPR28YDR218C YPC1P38298 316 aa4.02□□□□□ -1.77
SPR28YDR218C PRM10P42946 383 aa4.02□□□□□ -1.77
SPR28YDR218C IRC7P43623 340 aa4.02□□□□□ -1.77
SPR28YDR218C YJR056CP47115 236 aa4.02□□□□□ -1.77
SPR28YDR218C YGL039WP53183 348 aaKnown RBP4.02□□□□□ -1.77
SPR28YDR218C COG7P53195 279 aa4.02□□□□□ -1.77
SPR28YDR218C POP6P53218 158 aa4.02□□□□□ -1.77
SPR28YDR218C YLR152CP54072 576 aa4.02□□□□□ -1.77
SPR28YDR218C YDC1Q02896 317 aa4.02□□□□□ -1.77
SPR28YDR218C VPS60Q03390 229 aa4.02□□□□□ -1.77
SPR28YDR218C TDA1Q03533 586 aa4.02□□□□□ -1.77
SPR28YDR218C YET2Q04210 160 aa4.02□□□□□ -1.77
SPR28YDR218C TAF9Q05027 157 aa4.02□□□□□ -1.77
SPR28YDR218C BCH1Q05029 724 aa4.02□□□□□ -1.77
SPR28YDR218C BSP1Q06604 576 aa4.02□□□□□ -1.77
SPR28YDR218C MFG1Q07684 458 aa4.02□□□□□ -1.77
SPR28YDR218C YLR031WQ07978 186 aa4.02□□□□□ -1.77
SPR28YDR218C PFA4Q12006 378 aa4.02□□□□□ -1.77
SPR28YDR218C YDR018CQ12185 396 aa4.02□□□□□ -1.77
SPR28YDR218C NOT5Q12514 560 aaPredicted RBP4.02□□□□□ -1.77
SPR28YDR218C DPM1P14020 267 aaKnown RBP4.01□□□□□ -1.77
SPR28YDR218C COX14P39103 70 aa4.01□□□□□ -1.77
SPR28YDR218C KRE29P40026 464 aa4.01□□□□□ -1.77
SPR28YDR218C PSA1P41940 361 aaKnown RBP4.01□□□□□ -1.77
SPR28YDR218C GWT1P47026 490 aa4.01□□□□□ -1.77
SPR28YDR218C TRM9P49957 279 aa4.01□□□□□ -1.77
SPR28YDR218C CDC14Q00684 551 aa4.01□□□□□ -1.77
SPR28YDR218C NUP49Q02199 472 aa4.01□□□□□ -1.77
SPR28YDR218C TRM82Q03774 444 aa4.01□□□□□ -1.77
SPR28YDR218C ARO80Q04052 950 aa4.01□□□□□ -1.77
SPR28YDR218C DPP1Q05521 289 aa4.01□□□□□ -1.77
SPR28YDR218C ECI1Q05871 280 aa4.01□□□□□ -1.77
SPR28YDR218C BNA5Q05979 453 aa4.01□□□□□ -1.77
SPR28YDR218C YLR036CQ07986 203 aa4.01□□□□□ -1.77
SPR28YDR218C TPO4Q12256 659 aa4.01□□□□□ -1.77
SPR28YDR218C YLR126CQ12288 251 aa4.01□□□□□ -1.77
SPR28YDR218C DRS2P39524 1355 aa4.01□□□□□ -1.77
SPR28YDR218C PIS1P06197 220 aaKnown RBP4□□□□□ -1.77
SPR28YDR218C SPT3P06844 337 aa4□□□□□ -1.77
SPR28YDR218C CBS2P14905 389 aa4□□□□□ -1.77
SPR28YDR218C SAM2P19358 384 aaKnown RBP4□□□□□ -1.77
SPR28YDR218C IFM1P25038 676 aa4□□□□□ -1.77
SPR28YDR218C SPS18P32572 300 aa4□□□□□ -1.77
SPR28YDR218C NTF2P33331 125 aaKnown RBP4□□□□□ -1.77
SPR28YDR218C MRPL3P36516 390 aa4□□□□□ -1.77
SPR28YDR218C YHR127WP38833 243 aaKnown RBP4□□□□□ -1.77
SPR28YDR218C MTC6P38849 526 aa4□□□□□ -1.77
SPR28YDR218C MST28P39552 234 aa4□□□□□ -1.77
SPR28YDR218C YPS5P53057 165 aa4□□□□□ -1.77
SPR28YDR218C NQM1P53228 333 aaPredicted RBP4□□□□□ -1.77
SPR28YDR218C VHT1P53241 593 aa4□□□□□ -1.77
SPR28YDR218C NRK1P53915 240 aa4□□□□□ -1.77
SPR28YDR218C MAK3Q03503 176 aa4□□□□□ -1.77
SPR28YDR218C RIF2Q06208 395 aa4□□□□□ -1.77
SPR28YDR218C NOC4Q06512 552 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms