RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C TDA11P38854 504 aa2.38□□□□□ -2.03
RUB1YDR139C AVT6P40074 448 aa2.38□□□□□ -2.03
RUB1YDR139C YIA6P40556 373 aa2.38□□□□□ -2.03
RUB1YDR139C SYS1P41544 203 aa2.38□□□□□ -2.03
RUB1YDR139C AGP3P43548 558 aa2.38□□□□□ -2.03
RUB1YDR139C RSM27P53305 110 aa2.38□□□□□ -2.03
RUB1YDR139C ARP5P53946 755 aa2.38□□□□□ -2.03
RUB1YDR139C OSH6Q02201 448 aa2.38□□□□□ -2.03
RUB1YDR139C NNT1Q05874 261 aa2.38□□□□□ -2.03
RUB1YDR139C TAZ1Q06510 381 aa2.38□□□□□ -2.03
RUB1YDR139C ASR1Q06834 288 aa2.38□□□□□ -2.03
RUB1YDR139C YDL144CQ07589 356 aa2.38□□□□□ -2.03
RUB1YDR139C PPQ1P32945 549 aa2.37□□□□□ -2.03
RUB1YDR139C SPO19Q03029 223 aa2.37□□□□□ -2.03
RUB1YDR139C YML018CQ03730 393 aa2.37□□□□□ -2.03
RUB1YDR139C DPP1Q05521 289 aa2.37□□□□□ -2.03
RUB1YDR139C BER1Q06688 274 aaKnown RBP2.37□□□□□ -2.03
RUB1YDR139C TFS1P14306 219 aa2.36□□□□□ -2.03
RUB1YDR139C UGA1P17649 471 aa2.36□□□□□ -2.03
RUB1YDR139C OSM1P21375 501 aaKnown RBP2.36□□□□□ -2.03
RUB1YDR139C CSM1P25651 190 aa2.36□□□□□ -2.03
RUB1YDR139C VPS45P38932 577 aa2.36□□□□□ -2.03
RUB1YDR139C MRS2Q01926 470 aa2.36□□□□□ -2.03
RUB1YDR139C YMR209CQ03648 457 aa2.36□□□□□ -2.03
RUB1YDR139C BCP1Q06338 283 aa2.36□□□□□ -2.03
RUB1YDR139C GPN3Q06543 272 aa2.36□□□□□ -2.03
RUB1YDR139C POM33Q12164 279 aa2.36□□□□□ -2.03
RUB1YDR139C TDH2P00358 332 aaKnown RBP2.35□□□□□ -2.03
RUB1YDR139C RSA4P25382 515 aaKnown RBP2.35□□□□□ -2.03
RUB1YDR139C SUA5P32579 426 aa2.35□□□□□ -2.03
RUB1YDR139C UTR5P32630 166 aa2.35□□□□□ -2.03
RUB1YDR139C RPS0AP32905 252 aaKnown RBP2.35□□□□□ -2.03
RUB1YDR139C SPT4P32914 102 aaPredicted RBP2.35□□□□□ -2.03
RUB1YDR139C YKR032WP36127 104 aa2.35□□□□□ -2.03
RUB1YDR139C HIS2P38635 335 aa2.35□□□□□ -2.03
RUB1YDR139C SEN34P39707 275 aa2.35□□□□□ -2.03
RUB1YDR139C AVT7P40501 490 aa2.35□□□□□ -2.03
RUB1YDR139C PNC1P53184 216 aaKnown RBP2.35□□□□□ -2.03
RUB1YDR139C COG7P53195 279 aa2.35□□□□□ -2.03
RUB1YDR139C YNL260CP53846 198 aa2.35□□□□□ -2.03
RUB1YDR139C YOR114WQ12219 294 aa2.35□□□□□ -2.03
RUB1YDR139C PRR2Q12310 699 aa2.35□□□□□ -2.03
RUB1YDR139C ILV1P00927 576 aaKnown RBP2.34□□□□□ -2.03
RUB1YDR139C KRE1P17260 313 aa2.34□□□□□ -2.03
RUB1YDR139C MRPL40P36534 297 aa2.34□□□□□ -2.03
RUB1YDR139C SHQ1P40486 507 aaPredicted RBP2.34□□□□□ -2.03
RUB1YDR139C GCD14P46959 383 aaPredicted RBP2.34□□□□□ -2.03
RUB1YDR139C TPN1P53099 579 aa2.34□□□□□ -2.03
RUB1YDR139C SWT21P53873 357 aaPredicted RBP2.34□□□□□ -2.03
RUB1YDR139C ECM18Q04623 453 aa2.34□□□□□ -2.03
RUB1YDR139C ERV41Q04651 352 aa2.34□□□□□ -2.03
RUB1YDR139C YIL002W-AQ3E7Z5 69 aa2.34□□□□□ -2.03
RUB1YDR139C YBL081WP38180 368 aaKnown RBP2.33□□□□□ -2.04
RUB1YDR139C TRM7P38238 310 aaKnown RBP2.33□□□□□ -2.04
RUB1YDR139C SCC4P40090 624 aa2.33□□□□□ -2.04
RUB1YDR139C MIG2P53035 382 aa2.33□□□□□ -2.04
RUB1YDR139C TVP15Q03860 143 aa2.33□□□□□ -2.04
RUB1YDR139C TAF9Q05027 157 aa2.33□□□□□ -2.04
RUB1YDR139C YLL007CQ07799 665 aa2.33□□□□□ -2.04
RUB1YDR139C FEX1Q08913 375 aa2.33□□□□□ -2.04
RUB1YDR139C FEX2Q08991 375 aa2.33□□□□□ -2.04
RUB1YDR139C KRE6P32486 720 aa2.32□□□□□ -2.04
RUB1YDR139C CAB3P36076 571 aa2.32□□□□□ -2.04
RUB1YDR139C PHO89P38361 574 aa2.32□□□□□ -2.04
RUB1YDR139C YER084WP40057 128 aa2.32□□□□□ -2.04
RUB1YDR139C ALG9P53868 555 aaKnown RBP2.32□□□□□ -2.04
RUB1YDR139C YNL050CP53952 270 aa2.32□□□□□ -2.04
RUB1YDR139C CLP1Q08685 445 aaPredicted RBP2.32□□□□□ -2.04
RUB1YDR139C TIM22Q12328 207 aa2.32□□□□□ -2.04
RUB1YDR139C ATG5Q12380 294 aa2.32□□□□□ -2.04
RUB1YDR139C GAL7P08431 366 aa2.31□□□□□ -2.04
RUB1YDR139C ZWF1P11412 505 aaKnown RBP2.31□□□□□ -2.04
RUB1YDR139C DAL80P26343 269 aa2.31□□□□□ -2.04
RUB1YDR139C COT1P32798 439 aa2.31□□□□□ -2.04
RUB1YDR139C RPE1P46969 238 aa2.31□□□□□ -2.04
RUB1YDR139C VPS60Q03390 229 aa2.31□□□□□ -2.04
RUB1YDR139C PET494P07390 489 aaPredicted RBP2.3□□□□□ -2.04
RUB1YDR139C FRS2P15625 503 aaKnown RBP2.3□□□□□ -2.04
RUB1YDR139C DBP3P20447 523 aaKnown RBP2.3□□□□□ -2.04
RUB1YDR139C MEK1P24719 497 aaPredicted RBP2.3□□□□□ -2.04
RUB1YDR139C ATG15P25641 520 aa2.3□□□□□ -2.04
RUB1YDR139C ERG2P32352 222 aa2.3□□□□□ -2.04
RUB1YDR139C CAT2P32796 670 aaKnown RBP2.3□□□□□ -2.04
RUB1YDR139C POP8P38208 133 aa2.3□□□□□ -2.04
RUB1YDR139C SPL2P38839 148 aa2.3□□□□□ -2.04
RUB1YDR139C YGL185CP53100 379 aa2.3□□□□□ -2.04
RUB1YDR139C CPD1P53314 239 aa2.3□□□□□ -2.04
RUB1YDR139C EGD1Q02642 157 aaKnown RBP2.3□□□□□ -2.04
RUB1YDR139C MIX17Q03667 156 aa2.3□□□□□ -2.04
RUB1YDR139C YLR413WQ06689 675 aa2.3□□□□□ -2.04
RUB1YDR139C YPL150WQ12152 901 aa2.3□□□□□ -2.04
RUB1YDR139C PAN1P32521 1480 aa2.29□□□□□ -2.04
RUB1YDR139C NUP157P40064 1391 aaKnown RBP2.29□□□□□ -2.04
RUB1YDR139C YMR316C-AI2HB70 103 aa2.29□□□□□ -2.04
RUB1YDR139C ICL1P28240 557 aaPredicted RBP2.29□□□□□ -2.04
RUB1YDR139C YHI9P38765 294 aa2.29□□□□□ -2.04
RUB1YDR139C SUR2P38992 349 aa2.29□□□□□ -2.04
RUB1YDR139C IBA57P47158 497 aa2.29□□□□□ -2.04
RUB1YDR139C SYF2P53277 215 aaPredicted RBP2.29□□□□□ -2.04
RUB1YDR139C YNL095CP53932 642 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms