RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C INA22P40576 216 aa3.35□□□□□ -1.87
TRM1YDR120C DBP3P20447 523 aaKnown RBP3.34□□□□□ -1.87
TRM1YDR120C YKL162CP36052 402 aa3.34□□□□□ -1.87
TRM1YDR120C BIO3P50277 480 aa3.34□□□□□ -1.87
TRM1YDR120C NBP1P52919 319 aaPredicted RBP3.34□□□□□ -1.87
TRM1YDR120C TIM8P57744 87 aa3.34□□□□□ -1.87
TRM1YDR120C MRPS16Q02608 121 aa3.34□□□□□ -1.87
TRM1YDR120C ADD37Q03233 198 aa3.34□□□□□ -1.87
TRM1YDR120C SCS7Q03529 384 aa3.34□□□□□ -1.87
TRM1YDR120C YPL150WQ12152 901 aa3.34□□□□□ -1.87
TRM1YDR120C TRA1P38811 3744 aa3.33□□□□□ -1.88
TRM1YDR120C MRPL40P36534 297 aa3.33□□□□□ -1.88
TRM1YDR120C YBR241CP38142 488 aa3.33□□□□□ -1.88
TRM1YDR120C ATG12P38316 186 aa3.33□□□□□ -1.88
TRM1YDR120C AVT2P39981 480 aa3.33□□□□□ -1.88
TRM1YDR120C CDC40P40968 455 aaPredicted RBP3.33□□□□□ -1.88
TRM1YDR120C YPS5P53057 165 aa3.33□□□□□ -1.88
TRM1YDR120C YDR115WQ04598 105 aa3.33□□□□□ -1.88
TRM1YDR120C VAC14Q06708 880 aa3.33□□□□□ -1.88
TRM1YDR120C RPL21BQ12672 160 aaKnown RBP3.33□□□□□ -1.88
TRM1YDR120C PRX1P34227 261 aaKnown RBP3.33□□□□□ -1.88
TRM1YDR120C FET3P38993 636 aa3.33□□□□□ -1.88
TRM1YDR120C ERG10P41338 398 aaKnown RBP3.33□□□□□ -1.88
TRM1YDR120C VOA1P53262 265 aa3.33□□□□□ -1.88
TRM1YDR120C HCH1P53834 153 aa3.33□□□□□ -1.88
TRM1YDR120C RNH201P53942 307 aa3.33□□□□□ -1.88
TRM1YDR120C ERV25P54837 211 aaKnown RBP3.33□□□□□ -1.88
TRM1YDR120C RRG8Q06109 277 aa3.33□□□□□ -1.88
TRM1YDR120C ABP140Q08641 628 aaKnown RBP3.33□□□□□ -1.88
TRM1YDR120C REP1P03871 373 aa3.32□□□□□ -1.88
TRM1YDR120C CAR2P07991 424 aaKnown RBP3.32□□□□□ -1.88
TRM1YDR120C FPR1P20081 114 aaKnown RBP3.32□□□□□ -1.88
TRM1YDR120C RRT12P25381 491 aa3.32□□□□□ -1.88
TRM1YDR120C DAL80P26343 269 aa3.32□□□□□ -1.88
TRM1YDR120C BMH1P29311 267 aaKnown RBP3.32□□□□□ -1.88
TRM1YDR120C ITR2P30606 609 aa3.32□□□□□ -1.88
TRM1YDR120C MRPL27P36526 146 aaPredicted RBP3.32□□□□□ -1.88
TRM1YDR120C CHL4P38907 458 aa3.32□□□□□ -1.88
TRM1YDR120C RSM25P40496 264 aa3.32□□□□□ -1.88
TRM1YDR120C UFE1P41834 346 aa3.32□□□□□ -1.88
TRM1YDR120C RMI1Q02685 241 aa3.32□□□□□ -1.88
TRM1YDR120C MZM1Q03429 123 aaPredicted RBP3.32□□□□□ -1.88
TRM1YDR120C GIS3Q12418 502 aa3.32□□□□□ -1.88
TRM1YDR120C DCP1Q12517 231 aaPredicted RBP3.32□□□□□ -1.88
TRM1YDR120C FOL3Q12676 427 aaPredicted RBP3.32□□□□□ -1.88
TRM1YDR120C RAD3P06839 778 aa3.31□□□□□ -1.88
TRM1YDR120C SAR1P20606 190 aaKnown RBP3.31□□□□□ -1.88
TRM1YDR120C URA10P30402 227 aa3.31□□□□□ -1.88
TRM1YDR120C MEI5P32489 222 aa3.31□□□□□ -1.88
TRM1YDR120C PDC2P32896 925 aa3.31□□□□□ -1.88
TRM1YDR120C DTR1P38125 572 aa3.31□□□□□ -1.88
TRM1YDR120C PEX22P39718 180 aa3.31□□□□□ -1.88
TRM1YDR120C DSE1P40077 573 aa3.31□□□□□ -1.88
TRM1YDR120C LOH1P47055 219 aa3.31□□□□□ -1.88
TRM1YDR120C GPI8P49018 411 aa3.31□□□□□ -1.88
TRM1YDR120C NUP84P52891 726 aa3.31□□□□□ -1.88
TRM1YDR120C OKP1P53298 406 aa3.31□□□□□ -1.88
TRM1YDR120C MKC7P53379 596 aa3.31□□□□□ -1.88
TRM1YDR120C FAR10Q06001 478 aa3.31□□□□□ -1.88
TRM1YDR120C RLP24Q07915 199 aaKnown RBP3.31□□□□□ -1.88
TRM1YDR120C SLF1Q12034 447 aaKnown RBP3.31□□□□□ -1.88
TRM1YDR120C LDB17Q12342 491 aa3.31□□□□□ -1.88
TRM1YDR120C PRP8P33334 2413 aaKnown RBP3.31□□□□□ -1.88
TRM1YDR120C MSF1P08425 469 aa3.3□□□□□ -1.88
TRM1YDR120C OM45P16547 393 aa3.3□□□□□ -1.88
TRM1YDR120C SGE1P33335 543 aa3.3□□□□□ -1.88
TRM1YDR120C ECT1P33412 323 aa3.3□□□□□ -1.88
TRM1YDR120C CAB3P36076 571 aa3.3□□□□□ -1.88
TRM1YDR120C SRX1P36077 127 aa3.3□□□□□ -1.88
TRM1YDR120C FHL1P39521 936 aa3.3□□□□□ -1.88
TRM1YDR120C STB1P42845 420 aa3.3□□□□□ -1.88
TRM1YDR120C YGL262WP53054 175 aa3.3□□□□□ -1.88
TRM1YDR120C YLR012CQ07927 99 aa3.3□□□□□ -1.88
TRM1YDR120C RPN8Q08723 338 aaKnown RBP3.3□□□□□ -1.88
TRM1YDR120C SRO7Q12038 1033 aa3.3□□□□□ -1.88
TRM1YDR120C YPR1Q12458 312 aa3.3□□□□□ -1.88
TRM1YDR120C PFK27Q12471 397 aaPredicted RBP3.3□□□□□ -1.88
TRM1YDR120C SOD1P00445 154 aaKnown RBP3.3□□□□□ -1.88
TRM1YDR120C CBP6P07253 162 aaPredicted RBP3.3□□□□□ -1.88
TRM1YDR120C YKL071WP36086 256 aa3.3□□□□□ -1.88
TRM1YDR120C ECM13P38195 257 aa3.3□□□□□ -1.88
TRM1YDR120C KTR6P54070 446 aa3.3□□□□□ -1.88
TRM1YDR120C TPS1Q00764 495 aaKnown RBP3.3□□□□□ -1.88
TRM1YDR120C SPO19Q03029 223 aa3.3□□□□□ -1.88
TRM1YDR120C MRX11Q03079 207 aa3.3□□□□□ -1.88
TRM1YDR120C YMR111CQ04461 462 aaPredicted RBP3.3□□□□□ -1.88
TRM1YDR120C ECM18Q04623 453 aa3.3□□□□□ -1.88
TRM1YDR120C RDL2Q08742 149 aaKnown RBP3.3□□□□□ -1.88
TRM1YDR120C SAM4Q08985 325 aaKnown RBP3.3□□□□□ -1.88
TRM1YDR120C CTA1P15202 515 aa3.29□□□□□ -1.88
TRM1YDR120C RAD23P32628 398 aaKnown RBP3.29□□□□□ -1.88
TRM1YDR120C PMT4P46971 762 aa3.29□□□□□ -1.88
TRM1YDR120C CPR7P47103 393 aa3.29□□□□□ -1.88
TRM1YDR120C FLC3P53121 802 aa3.29□□□□□ -1.88
TRM1YDR120C PNC1P53184 216 aaKnown RBP3.29□□□□□ -1.88
TRM1YDR120C YGR018CP53211 109 aa3.29□□□□□ -1.88
TRM1YDR120C RPL21AQ02753 160 aaKnown RBP3.29□□□□□ -1.88
TRM1YDR120C YPL080CQ02826 108 aa3.29□□□□□ -1.88
TRM1YDR120C CSF1Q12150 2958 aa3.28□□□□□ -1.88
TRM1YDR120C ADH1P00330 348 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms