RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W HSV2P50079 448 aaPredicted RBP3.88□□□□□ -1.79
TRS85YDR108W AZR1P50080 613 aa3.88□□□□□ -1.79
TRS85YDR108W PHB2P50085 310 aa3.88□□□□□ -1.79
TRS85YDR108W AIF1P52923 378 aa3.88□□□□□ -1.79
TRS85YDR108W DUS1P53759 423 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W FMP41P53889 259 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W YVH1Q02256 364 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W CTF19Q02732 369 aa3.88□□□□□ -1.79
TRS85YDR108W GIP3Q03016 1276 aa3.88□□□□□ -1.79
TRS85YDR108W CGI121Q03705 181 aaKnown RBP3.88□□□□□ -1.79
TRS85YDR108W VBA1Q04301 562 aa3.88□□□□□ -1.79
TRS85YDR108W TEN1Q07921 160 aa3.88□□□□□ -1.79
TRS85YDR108W NUS1Q12063 375 aa3.88□□□□□ -1.79
TRS85YDR108W EPT1P22140 391 aa3.87□□□□□ -1.79
TRS85YDR108W EXG1P23776 448 aaKnown RBP3.87□□□□□ -1.79
TRS85YDR108W KIN82P25341 720 aa3.87□□□□□ -1.79
TRS85YDR108W YCP4P25349 247 aaKnown RBP3.87□□□□□ -1.79
TRS85YDR108W ARO2P28777 376 aaKnown RBP3.87□□□□□ -1.79
TRS85YDR108W YEF1P32622 495 aa3.87□□□□□ -1.79
TRS85YDR108W TGL1P34163 548 aa3.87□□□□□ -1.79
TRS85YDR108W ASK1P35734 292 aa3.87□□□□□ -1.79
TRS85YDR108W VBA5P36172 582 aa3.87□□□□□ -1.79
TRS85YDR108W MTC4P38335 694 aaKnown RBP3.87□□□□□ -1.79
TRS85YDR108W ARP1P38696 384 aa3.87□□□□□ -1.79
TRS85YDR108W KHA1P40309 873 aa3.87□□□□□ -1.79
TRS85YDR108W NTA1P40354 457 aa3.87□□□□□ -1.79
TRS85YDR108W FLX1P40464 311 aa3.87□□□□□ -1.79
TRS85YDR108W SYS1P41544 203 aa3.87□□□□□ -1.79
TRS85YDR108W YFL052WP43551 465 aa3.87□□□□□ -1.79
TRS85YDR108W ALK1P43633 760 aaKnown RBP3.87□□□□□ -1.79
TRS85YDR108W PFD1P46988 109 aa3.87□□□□□ -1.79
TRS85YDR108W SDT1P53078 280 aa3.87□□□□□ -1.79
TRS85YDR108W YNL134CP53912 376 aaKnown RBP3.87□□□□□ -1.79
TRS85YDR108W UPS3Q04006 179 aa3.87□□□□□ -1.79
TRS85YDR108W RRP45Q05636 305 aaKnown RBP3.87□□□□□ -1.79
TRS85YDR108W CTS2Q06350 511 aa3.87□□□□□ -1.79
TRS85YDR108W SWC7Q06707 132 aa3.87□□□□□ -1.79
TRS85YDR108W AIM39Q08223 395 aa3.87□□□□□ -1.79
TRS85YDR108W GPM2Q12008 311 aa3.87□□□□□ -1.79
TRS85YDR108W UPC2Q12151 913 aa3.87□□□□□ -1.79
TRS85YDR108W SUL2Q12325 893 aa3.87□□□□□ -1.79
TRS85YDR108W YLR422WQ06409 1932 aa3.87□□□□□ -1.79
TRS85YDR108W FKS3Q04952 1785 aa3.87□□□□□ -1.79
TRS85YDR108W SAM1P10659 382 aaKnown RBP3.86□□□□□ -1.79
TRS85YDR108W PPH21P23594 369 aa3.86□□□□□ -1.79
TRS85YDR108W STP22P25604 385 aa3.86□□□□□ -1.79
TRS85YDR108W MKK2P32491 506 aa3.86□□□□□ -1.79
TRS85YDR108W CLB6P32943 380 aa3.86□□□□□ -1.79
TRS85YDR108W YOX1P34161 385 aa3.86□□□□□ -1.79
TRS85YDR108W PRY2P36110 329 aa3.86□□□□□ -1.79
TRS85YDR108W ALY1P36117 915 aa3.86□□□□□ -1.79
TRS85YDR108W YBR284WP38150 797 aa3.86□□□□□ -1.79
TRS85YDR108W NTC20P38302 140 aaPredicted RBP3.86□□□□□ -1.79
TRS85YDR108W GDI1P39958 451 aaKnown RBP3.86□□□□□ -1.79
TRS85YDR108W YER188WP40103 239 aa3.86□□□□□ -1.79
TRS85YDR108W LRO1P40345 661 aa3.86□□□□□ -1.79
TRS85YDR108W YIL067CP40514 678 aa3.86□□□□□ -1.79
TRS85YDR108W FET4P40988 552 aa3.86□□□□□ -1.79
TRS85YDR108W PRY1P47032 299 aa3.86□□□□□ -1.79
TRS85YDR108W OST3P48439 350 aa3.86□□□□□ -1.79
TRS85YDR108W AVT4P50944 713 aa3.86□□□□□ -1.79
TRS85YDR108W PRM8P53174 237 aa3.86□□□□□ -1.79
TRS85YDR108W TIM21P53220 239 aa3.86□□□□□ -1.79
TRS85YDR108W SYF2P53277 215 aaPredicted RBP3.86□□□□□ -1.79
TRS85YDR108W PRP38Q00723 242 aaPredicted RBP3.86□□□□□ -1.79
TRS85YDR108W PLB2Q03674 706 aa3.86□□□□□ -1.79
TRS85YDR108W CSI2Q08054 341 aa3.86□□□□□ -1.79
TRS85YDR108W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
TRS85YDR108W YDR262WQ12331 272 aa3.86□□□□□ -1.79
TRS85YDR108W RDI1Q12434 202 aa3.86□□□□□ -1.79
TRS85YDR108W SNF8Q12483 233 aa3.86□□□□□ -1.79
TRS85YDR108W YEL009C-AA0A023PZF2 135 aa3.86□□□□□ -1.79
TRS85YDR108W SCH9P11792 824 aaKnown RBP3.86□□□□□ -1.79
TRS85YDR108W APE1P14904 514 aa3.86□□□□□ -1.79
TRS85YDR108W MIH1P23748 554 aa3.86□□□□□ -1.79
TRS85YDR108W MSK1P32048 576 aa3.86□□□□□ -1.79
TRS85YDR108W NTH1P32356 751 aa3.86□□□□□ -1.79
TRS85YDR108W CDC5P32562 705 aa3.86□□□□□ -1.79
TRS85YDR108W SUA5P32579 426 aa3.86□□□□□ -1.79
TRS85YDR108W SFB3P38810 929 aa3.86□□□□□ -1.79
TRS85YDR108W PFS1P38872 237 aa3.86□□□□□ -1.79
TRS85YDR108W GPI16P38875 610 aa3.86□□□□□ -1.79
TRS85YDR108W SKP1P52286 194 aa3.86□□□□□ -1.79
TRS85YDR108W COS10P52924 374 aa3.86□□□□□ -1.79
TRS85YDR108W NPY1P53164 384 aa3.86□□□□□ -1.79
TRS85YDR108W YGR079WP53249 370 aa3.86□□□□□ -1.79
TRS85YDR108W LSM3P57743 89 aaKnown RBP3.86□□□□□ -1.79
TRS85YDR108W AAT1Q01802 451 aa3.86□□□□□ -1.79
TRS85YDR108W SPP2Q02521 185 aa3.86□□□□□ -1.79
TRS85YDR108W GAS3Q03655 524 aa3.86□□□□□ -1.79
TRS85YDR108W YMR160WQ03823 816 aa3.86□□□□□ -1.79
TRS85YDR108W TMN2Q04562 672 aa3.86□□□□□ -1.79
TRS85YDR108W RNH202Q05635 350 aa3.86□□□□□ -1.79
TRS85YDR108W CRT10Q08226 957 aa3.86□□□□□ -1.79
TRS85YDR108W BSC6Q08280 497 aa3.86□□□□□ -1.79
TRS85YDR108W YOR059CQ08448 450 aaKnown RBP3.86□□□□□ -1.79
TRS85YDR108W SRL2Q12020 392 aa3.86□□□□□ -1.79
TRS85YDR108W RRI1Q12468 440 aa3.86□□□□□ -1.79
TRS85YDR108W ADE4P04046 510 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W SAM35P14693 329 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms