RNA–Protein interactions for RNA: YDL208W

NHP2, Transcript of Protein related to mammalian high mobility group (HMG) proteins, yeast

Gene NHP2, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP2	YDL208W	TAF9	Q05027	157 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	ECM19	Q06011	112 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	DXO1	Q06349	442 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	SHS1	Q07657	551 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	SLD7	Q08457	257 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	ABP140	Q08641	628 aa	Known RBP	0.8	□□□□□ -2.28
NHP2	YDL208W	RIO1	Q12196	484 aa	Known RBP	0.8	□□□□□ -2.28
NHP2	YDL208W	SFI1	Q12369	946 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	DFM1	Q12743	341 aa	Known RBP	0.8	□□□□□ -2.28
NHP2	YDL208W	YDR524C-B	Q3E6R4	66 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	YKL068W-A	Q3E826	78 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	YDR034W-B	Q6Q5X2	51 aa		0.8	□□□□□ -2.28
NHP2	YDL208W	TOR2	P32600	2474 aa	Known RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	BLM10	P43583	2143 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	CDC8	P00572	216 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	RPS14A	P06367	137 aa	Known RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	RAD1	P06777	1100 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	TRX1	P22217	103 aa	Known RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	RPB9	P27999	122 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	SRB4	P32569	687 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	BUD2	P33314	1104 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	BYE1	P36106	594 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	UIP5	P36137	443 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	ECM13	P38195	257 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	ZTA1	P38230	334 aa	Known RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	SPP381	P38282	291 aa	Predicted RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	RCK1	P38622	512 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	RPS14B	P39516	138 aa	Known RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	YMR134W	P40207	237 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	RPC17	P47076	161 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	HOP2	P53187	214 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
NHP2	YDL208W	YNL095C	P53932	642 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	ALG11	P53954	548 aa	Known RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	YNL040W	P53960	456 aa	Predicted RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	MRS2	Q01926	470 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	VPS60	Q03390	229 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	MZM1	Q03429	123 aa	Predicted RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	ARO80	Q04052	950 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	SXM1	Q04175	944 aa	Known RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	URC2	Q04411	772 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	YMR114C	Q04471	368 aa	Known RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	STE23	Q06010	1027 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	GAT3	Q07928	141 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	FEX1	Q08913	375 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	FEX2	Q08991	375 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	GPM2	Q12008	311 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	GPM3	Q12326	303 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	EMP46	Q12396	444 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	OCA6	Q12454	224 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	NOT5	Q12514	560 aa	Predicted RBP	0.79	□□□□□ -2.28
NHP2	YDL208W	IZH4	Q99393	312 aa		0.79	□□□□□ -2.28
NHP2	YDL208W	JIP3	O13555	125 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	COX5A	P00424	153 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	HAP2	P06774	265 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	MET16	P18408	261 aa	Predicted RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	MEI4	P29467	408 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	ARO4	P32449	370 aa	Known RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	EFB1	P32471	206 aa	Known RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	SMI1	P32566	505 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	NFU1	P32860	256 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	KDX1	P36005	433 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	DRE2	P36152	348 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	ETR1	P38071	380 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	KAP104	P38217	918 aa	Known RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	YBR062C	P38239	180 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	YSW1	P38280	609 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	TAE1	P38340	232 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	HSM3	P38348	480 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	YHI9	P38765	294 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	SMF2	P38778	549 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	AIM18	P38884	321 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	YDR089W	P38966	869 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	AVT2	P39981	480 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	EDC3	P39998	551 aa	Known RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	RRG9	P40156	214 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	YIL054W	P40524	105 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	INA22	P40576	216 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	TMA22	P47089	198 aa	Predicted RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	PEX31	P53203	462 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	YNL247W	P53852	767 aa	Known RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	YNL134C	P53912	376 aa	Known RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	OSH6	Q02201	448 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	UTP6	Q02354	440 aa	Known RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	PIR1	Q03178	341 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	GAS3	Q03655	524 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	FMN1	Q03778	218 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	FAR8	Q05040	523 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	GRX8	Q05926	109 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	YLR456W	Q06199	204 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	YLR413W	Q06689	675 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	YOL019W	Q08157	551 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	UAF30	Q08747	228 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	SPE3	Q12074	293 aa	Known RBP	0.78	□□□□□ -2.28
NHP2	YDL208W	YMR030W-A	Q3E760	96 aa		0.78	□□□□□ -2.28
NHP2	YDL208W	QCR6	P00127	147 aa		0.77	□□□□□ -2.29
NHP2	YDL208W	CDC31	P06704	161 aa	Known RBP	0.77	□□□□□ -2.29
NHP2	YDL208W	SPT3	P06844	337 aa		0.77	□□□□□ -2.29
NHP2	YDL208W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.77	□□□□□ -2.29	not detected
NHP2	YDL208W	MRPL8	P22353	238 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms