RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W YNL143CP53908 130 aa0.17□□□□□ -2.38
HMRA1YCR097W BUD21Q08492 214 aaPredicted RBP0.17□□□□□ -2.38
HMRA1YCR097W RAS2P01120 322 aaKnown RBP0.16□□□□□ -2.38
HMRA1YCR097W FPR1P20081 114 aaKnown RBP0.16□□□□□ -2.38
HMRA1YCR097W YBR220CP38318 560 aa0.16□□□□□ -2.38
HMRA1YCR097W RPL37AP49166 88 aaKnown RBP0.16□□□□□ -2.38
HMRA1YCR097W UTP6Q02354 440 aaKnown RBP0.16□□□□□ -2.38
HMRA1YCR097W SMC6Q12749 1114 aa0.16□□□□□ -2.38
HMRA1YCR097W YBL112CQ3E7Y4 105 aa0.16□□□□□ -2.38
HMRA1YCR097W RPL6BP05739 176 aaKnown RBP0.15□□□□□ -2.39
HMRA1YCR097W UBA1P22515 1024 aaKnown RBP0.15□□□□□ -2.39
HMRA1YCR097W ACB1P31787 87 aa0.15□□□□□ -2.39
HMRA1YCR097W VAB2P40003 282 aa0.15□□□□□ -2.39
HMRA1YCR097W YJL055WP47044 245 aa0.15□□□□□ -2.39
HMRA1YCR097W YGR016WP53209 190 aa0.15□□□□□ -2.39
HMRA1YCR097W RPL6AQ02326 176 aaKnown RBP0.15□□□□□ -2.39
HMRA1YCR097W SNX41Q04053 625 aa0.15□□□□□ -2.39
HMRA1YCR097W DCN1Q12395 269 aa0.15□□□□□ -2.39
HMRA1YCR097W GDT1P38301 280 aaPredicted RBP0.14□□□□□ -2.39
HMRA1YCR097W ECM18Q04623 453 aa0.14□□□□□ -2.39
HMRA1YCR097W SPT8P38915 602 aa0.13□□□□□ -2.39
HMRA1YCR097W YPL039WQ03080 316 aa0.13□□□□□ -2.39
HMRA1YCR097W RDS1P25611 832 aa0.12□□□□□ -2.39
HMRA1YCR097W VMA5P31412 392 aaKnown RBP0.12□□□□□ -2.39
HMRA1YCR097W MDL1P33310 695 aa0.12□□□□□ -2.39
HMRA1YCR097W PHO89P38361 574 aa0.12□□□□□ -2.39
HMRA1YCR097W CAJ1P39101 391 aa0.12□□□□□ -2.39
HMRA1YCR097W YFL040WP43562 540 aa0.12□□□□□ -2.39
HMRA1YCR097W SXM1Q04175 944 aaKnown RBP0.12□□□□□ -2.39
HMRA1YCR097W UTP23Q12339 254 aaKnown RBP0.12□□□□□ -2.39
HMRA1YCR097W TFB5Q3E7C1 72 aaPredicted RBP0.12□□□□□ -2.39
HMRA1YCR097W BMH1P29311 267 aaKnown RBP0.11□□□□□ -2.39
HMRA1YCR097W MCH2P36032 473 aa0.11□□□□□ -2.39
HMRA1YCR097W VTC1P40046 129 aaRIP-Chip data0.11□□□□□ -2.39not detected
HMRA1YCR097W AVT7P40501 490 aa0.11□□□□□ -2.39
HMRA1YCR097W SNX4P47057 423 aa0.11□□□□□ -2.39
HMRA1YCR097W RPL37BP51402 88 aaKnown RBP0.11□□□□□ -2.39
HMRA1YCR097W AAH1P53909 347 aa0.11□□□□□ -2.39
HMRA1YCR097W IRC4Q03036 179 aa0.11□□□□□ -2.39
HMRA1YCR097W PRM15Q03262 622 aa0.11□□□□□ -2.39
HMRA1YCR097W RVB1Q03940 463 aaKnown RBP0.11□□□□□ -2.39
HMRA1YCR097W PEX12Q04370 399 aa0.11□□□□□ -2.39
HMRA1YCR097W BUR2Q05949 395 aa0.11□□□□□ -2.39
HMRA1YCR097W YHB1P39676 399 aaKnown RBP0.1□□□□□ -2.39
HMRA1YCR097W VPS9P54787 451 aa0.1□□□□□ -2.39
HMRA1YCR097W MHT1Q12525 324 aa0.1□□□□□ -2.39
HMRA1YCR097W MNE1P24720 663 aa0.09□□□□□ -2.4
HMRA1YCR097W ERG2P32352 222 aa0.09□□□□□ -2.4
HMRA1YCR097W YHR035WP38769 630 aa0.09□□□□□ -2.4
HMRA1YCR097W PRP39P39682 629 aaKnown RBP0.09□□□□□ -2.4
HMRA1YCR097W SEN34P39707 275 aa0.09□□□□□ -2.4
HMRA1YCR097W GDI1P39958 451 aaKnown RBP0.09□□□□□ -2.4
HMRA1YCR097W TAD2P47058 250 aa0.09□□□□□ -2.4
HMRA1YCR097W YNL146WP53906 100 aa0.09□□□□□ -2.4
HMRA1YCR097W CYR1P08678 2026 aaKnown RBP0.08□□□□□ -2.4
HMRA1YCR097W RAD3P06839 778 aa0.08□□□□□ -2.4
HMRA1YCR097W FBA1P14540 359 aaKnown RBP0.08□□□□□ -2.4
HMRA1YCR097W COT1P32798 439 aa0.08□□□□□ -2.4
HMRA1YCR097W ZRT1P32804 376 aa0.08□□□□□ -2.4
HMRA1YCR097W IMP3P32899 183 aaPredicted RBP0.08□□□□□ -2.4
HMRA1YCR097W PXA2P34230 853 aa0.08□□□□□ -2.4
HMRA1YCR097W ALP1P38971 573 aa0.08□□□□□ -2.4
HMRA1YCR097W RPA34P47006 233 aaPredicted RBP0.08□□□□□ -2.4
HMRA1YCR097W PAR32Q12515 295 aaKnown RBP0.08□□□□□ -2.4
HMRA1YCR097W SPO24Q3E752 67 aa0.08□□□□□ -2.4
HMRA1YCR097W RPL2AP0CX45 254 aaKnown RBP0.07□□□□□ -2.4
HMRA1YCR097W RPL2BP0CX46 254 aaKnown RBP0.07□□□□□ -2.4
HMRA1YCR097W MDH2P22133 377 aa0.07□□□□□ -2.4
HMRA1YCR097W DPB2P24482 689 aaPredicted RBP0.07□□□□□ -2.4
HMRA1YCR097W POP8P38208 133 aa0.07□□□□□ -2.4
HMRA1YCR097W YBR219CP38317 127 aa0.07□□□□□ -2.4
HMRA1YCR097W YHI9P38765 294 aa0.07□□□□□ -2.4
HMRA1YCR097W SHC1P39000 512 aa0.07□□□□□ -2.4
HMRA1YCR097W YML6P51998 286 aa0.07□□□□□ -2.4
HMRA1YCR097W SWC4P53201 476 aa0.07□□□□□ -2.4
HMRA1YCR097W YGR168CP53293 376 aa0.07□□□□□ -2.4
HMRA1YCR097W RRP42Q12277 265 aaPredicted RBP0.07□□□□□ -2.4
HMRA1YCR097W YPR1Q12458 312 aa0.07□□□□□ -2.4
HMRA1YCR097W POX1P13711 748 aa0.06□□□□□ -2.4
HMRA1YCR097W VPH1P32563 840 aaKnown RBP0.06□□□□□ -2.4
HMRA1YCR097W KDX1P36005 433 aa0.06□□□□□ -2.4
HMRA1YCR097W DRE2P36152 348 aa0.06□□□□□ -2.4
HMRA1YCR097W YSW1P38280 609 aa0.06□□□□□ -2.4
HMRA1YCR097W HUA1P40325 198 aa0.06□□□□□ -2.4
HMRA1YCR097W SHQ1P40486 507 aaPredicted RBP0.06□□□□□ -2.4
HMRA1YCR097W BMT5P40493 336 aa0.06□□□□□ -2.4
HMRA1YCR097W PRM10P42946 383 aa0.06□□□□□ -2.4
HMRA1YCR097W YPT32P51996 222 aaKnown RBP0.06□□□□□ -2.4
HMRA1YCR097W SAS5Q99314 248 aa0.06□□□□□ -2.4
HMRA1YCR097W IZH4Q99393 312 aa0.06□□□□□ -2.4
HMRA1YCR097W CCA1P21269 546 aa0.05□□□□□ -2.4
HMRA1YCR097W PEX4P29340 183 aa0.05□□□□□ -2.4
HMRA1YCR097W RNP1P32385 249 aa0.05□□□□□ -2.4
HMRA1YCR097W CSG2P35206 410 aa0.05□□□□□ -2.4
HMRA1YCR097W YPC1P38298 316 aa0.05□□□□□ -2.4
HMRA1YCR097W UBC13P52490 153 aa0.05□□□□□ -2.4
HMRA1YCR097W ERG25P53045 309 aa0.05□□□□□ -2.4
HMRA1YCR097W YNR062CP53748 327 aa0.05□□□□□ -2.4
HMRA1YCR097W CSI2Q08054 341 aa0.05□□□□□ -2.4
HMRA1YCR097W YMR316C-AI2HB70 103 aa0.04□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms